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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0182500 |
| Transcript ID | LotjaGi1g1v0182500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transposon protein, putative, Mutator sub-class; TAIR: AT1G06740.1 MuDR family transposase; Swiss-Prot: sp|Q9JKS6|PCLO_RAT Protein piccolo; TrEMBL-Plants: tr|A0A0B2SI26|A0A0B2SI26_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0182500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:35595957..35600389) extracted from Lotus japonicus Gifu genome v1.2.
GCATCTTTTATTGCCTATTTTAGTCATGTCTTAGTCCATTCAATGCATTGATGTGTGTTATTTAATTGATAAGTTTGTTT GGTATGTTATTTAATTGAATCCCTGTCTTGTTTGTGCTTGCATGTGGTCCATGAGATTTCCTTTAAAGTTTATTCTATTG TCTTTCTACAGGCCTATTGTTGCCCATGTGATAACCATGAAAGTGCATCATAGGGGTGAAATTACATTTGACCCAAATAT GCCCTATGAAAGTGGGCTCTGCCAATCCTTTGAACATATGGATGTGGATCACATTTCATCCATTGTGGTGGGTAATTTGG TAAAGTACTTGGGATATCCCAGCTTCAAATGCTTGTGGTATAGGCATGTGGCTAGTGATGGGTCTGTCTGCTTTAGTCCA CTTTCCAATGATGAAGATGTTAGAGAATTCTTTGAAAATGTTAAAGGTGTAGCTGAAGTTGATATTTATGTTGAACACCT AGTGGAAGATCCAAATATTGTTCCTCTAATTGCTTACAAGAGTGCTGAAGATACTCCTGAGGTATTGCAAGTTGGTTCTG AAAGTGATGATGAGGTATTGCAAGACAGGGAGGGTGAGACTGAGACAGTCAAGGAGGCTGAGTTAGTGCAAGACAAGGAT GGTCAAAGTGTGCAGGAAATTCAGATTGATGCTGAGGTAATGAAATTATGATTTAATTTTTGTGTAAGTTGAAATAAAGT TACCCTTTAAGTTGTCATGAAAAAAGAGATTTATGCTTAGTTGTGTTTTTGGATAATCAAAAGGTTCTCCAACCTGAACA GAGAAGAGGTGCTGAGTTAGAGCAACACAGGGAGGCTGAAGAAGGGCATGAAAAGGAAAGTGAGGCTGAGGTAATTAAAT AATGAATAGTTTGTGAATTAAAGCTACACTTTAAGTTTCCATGAAAAAAATATTGATGCTTAGTTTTGTTTTCAGATTGT TGTCAATGATGAACAGAGGAGAAGTGCTGAGTTAGAGCAAGACAAGGAGGCTGAAGAAGCGCATGAAAAAGAATTTGAGG CTGAGGTAATTAAATGGGTTTATTACTTAATGTTTAATTTGTGAATTGATGCTATAATTTAAGTTGCCATGAAAAAAATA TTGATGCTTAGTTTTGTTTTCAGGTTGTTGTCAATGATGGACAGAGGAGAGGTACTGAGTTAGAGCAAGACAAGGAGGGT GAGTCAGTGCAAGAAAAAGAAATTGAGTCTGAGGTAATTAAATGATCAGTTACTTAATGTTTAATTTGTTATTGAGTCTG AGGTAATGAGTTAAGCAAAATTTCTTGTTTAAGTTGTGAATTAAAGTTGGTCTTTAAGTTATCATGAAAATTATATTGCT GATCAGTTTGTTGTCAATTAGGAACAGATTCGTGATGTGGATGACAATGATGAAGTAACTGAAAATGACAAGGGGGTAGA TAAGGGAAAAAGAAAGGCCAGTGAGGTTCTTCTCAGTGATGAAGATGAGGATTCTGATGCTGAATTTGATCCAAATGATG AAGAGGCATCCTCTGATTTTTCAATGGATGACAGTGACTACGAAGAAGATTGGGATTGGCTATGTGTGCTTCCTAAAGAG TCTCTGCTGAATATAGCTGAGGCCAATCCAGATCCCACTTTTGCAGAAGGTTCTACTGATCAATATACTCAAGCTGTGAA TGAGTCAAGGAACCTGGAGCCTAGTACATATGAGGAATTTGAAGATGAGGATGGTGATTCTGAGGACTTAGAAAGTCCAT CAGAAAGCGATGATGAAGGAAAAAGTAGAAGGAAATATCCTAAGTTCAAACCTACTGAAGATGGGGAGGTGGTTCATCTT GAGTTAGGTCTGACTTTCAACAACAAAGATCAGTTTAAGGATGCTGTCAGTGATTTTGCTATCCAAACCAAGAAGAATCT GACAATCACCAAAAATGATAAAAAGAGGATGGTGGTTAAATGTGTTAAGGAGTGTCCATTCTACCTGAGAGCCAGCAAGA CTCCTTCAAGGCCTATCTGGCAAATTGTAAGCTTCCATAACAACCATAATTGCTGCAGGACAGCCAGTAATAGGCAGGCA AAGACATTTTGGCTTGCTAAGAAATTTATGCAAATTCTGAAACACACTCCAGATTTGAAAGTGAGGGGCTTGATAGAGGA GGCAAGGGTCAGGTGGGGCATTGTGATAGGGAGGTACAAGGCATACAGGGCAAAGGTCAAGAATCTAGAGATGTTGCATG GTGCAAGTGTGGAGCAATACAGTCACCTGAGGCAGTATGCTCCTGAATTGCTGAGAAGCAATCCTGGATCCACAGTCATT ATAAAATCAGCAGTGGGAGTACATGGCCCAGTCTTTGAGAGGATCTACATCTGCTTTCAAGCTACTAAGACTGCATTTGC CAAGCACTGTAGACCCTTAATTGGGTTGGATGGCTGCTTCCTTAAGAGACTATATGGTGGTCAACTTCTGTCAGCCGTAG GCAAAGATGGAAACAACCAAATGTTTCCAGTAGCATTTGCAGTAGTGGAAGCTGAAACTAAGGATTCCTGGACTTGGTTC TTGAACATTCTACTACATGATCTGAATAGTGTTAAACCTCAAAATTGGGCATTCATCTCTGACCAGCAAAAAGTAATTAT GTTTAGACTTTTCCCTTTGTCTTATTTTACATTATGTTATTTTTCTCTAATGTTACATTCATCTCTATTGCATTGTTAGA GATTGGTTCCTGCTATTGCTGAATTGGGTCCAGATGTTGAACACAGATTGTGTGTCAAACACTTATACAGTAATTTCAGG AAGAGGTTCCCAGGAGAAGAGTTGAAGAATGCTTTATGGTCTGCTGCAAGGGCTAGCACAGAACCACAATGGAAAACTGC AATGGATAACATGAAGGAATTGAATCAAGATGCTTGGCTGGAAATGATGCATGTACCTCCTAAGATGTGGACAAGATCAG CTTACAGCCCACACACACACTGTGATCTCCAGGTTAACAACATGTGTGAGGCATTTAATAGGTCTATCTTGGAGCATAGA GACAAGCCTATTATCACTTTGCTTGAGGGGCTGAAATTTTATCTCACTAATCGCATTGTGAAGCAGAATGATCTAATGCT TAGGTGGAGAAATAGTCAGCTGTGTCCAATGATTCAGCAAAAGCTTGATATTATAAAGAACCATTCAGAGAGGTGGAGAC CTAACTGGAATGGTGATATTGCACATGGACTATTTGAAGTACAGAGGGACAATGATAAGTGTGCTGTCAATGTAGAGCTA AGGACATGCGCTTGTAGGAGATGGGATCTGACTGGGATTCCCTGTGTGCACGCTGTGGCCTGTATGTGGTATAATAACCA TGTGCCAGAGAATTATGTGGACATGGCATACAGGTAATGCAAATAATTTTTCTTAAGTAATAATGCATTATGTTGATTAA CAAACTAACAATTTGTTTCTATGTTTTTCAGGAGGCACACATTTCTGAATACATACAGCCACATAATCCTCCCAAACAAT GGGCCCAAATTATGGCCAGATGTGGAAGCAGCACCTCTAAATCCCCCTTATGTGAGGAGGGCCCCGGGAAGGCCAAAAAA ACAGAGGAACAAGGCAAATGATGAGCCTAGCAACCCTAATAGGCTGAGGAGGATTAGTTCCACTGTGAGATGTAGAAGGT GTGGAGAGCCTGGACACAACAAGAGAACCTGCAAAGGTAAAACTGCAGCTGATAGGACAATCCTAGTAGGAGGCAATGAG GTAATGAATTTACTTGTGCTTACCAATTAAATTTTGTCAAAGTTGTGAATTTACTTTAGTGGATTGTGTTTGATTTCAGG CAAATACTCAAGTTCTTCAACCTGAACAGAGAAGGACTACTAGAAATAGAGGTCAGAAGAGGAATGCTCAATCTGGACCA GGTGAAACTTCAGCTCAAGGTGCTGCAAATAACCAGCCTGCACCCTCTGCTCCAGCAAATTCACAGGCTCAACAAACTGA TGCTCAATCTTCTCAGCCTGCACCCACTGCTCCAGCAAATTCTCAGGCTCAACAAACTGGTGCTCCATCTTCTCAGCCTC AGCACATAGCTACTGCATATTCTCAGCCTGCACCTACTGCCACTACATCTCAGCCAAATGCACCAAGGAGGAGAGGAAGA AAGAGGAATGCAGAAGCAATTAGTGGCACTCAGTAGTGTTTTTAGATCTGTTATTCTATTTTTATGAACCTATTGTCCTG TGGATGGTGTTTTTAAGTCTGTGTTTTTTGAGGTCTTGTAATGAACCTAGTCTTGTTGTGTATGTATCTGGTATGGACCA AGTATGTTTTGGATGGTTATGTAGGTTTTTTGGATGGTGGATTTTGCTGATGTAACAACTATGGCTATTCCTTCTTATTT ATGAGACTCTGTTGAAGTAACAACTATGTTCCT
CDS sequence (LotjaGi1g1v0182500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAGTGCATCATAGGGGTGAAATTACATTTGACCCAAATATGCCCTATGAAAGTGGGCTCTGCCAATCCTTTGAACA TATGGATGTGGATCACATTTCATCCATTGTGGTGGGTAATTTGGTAAAGTACTTGGGATATCCCAGCTTCAAATGCTTGT GGTATAGGCATGTGGCTAGTGATGGGTCTGTCTGCTTTAGTCCACTTTCCAATGATGAAGATGTTAGAGAATTCTTTGAA AATGTTAAAGGTGTAGCTGAAGTTGATATTTATGTTGAACACCTAGTGGAAGATCCAAATATTGTTCCTCTAATTGCTTA CAAGAGTGCTGAAGATACTCCTGAGGTATTGCAAGTTGGTTCTGAAAGTGATGATGAGGTATTGCAAGACAGGGAGGGTG AGACTGAGACAGTCAAGGAGGCTGAGTTAGTGCAAGACAAGGATGGTCAAAGTGTGCAGGAAATTCAGATTGATGCTGAG GTTCTCCAACCTGAACAGAGAAGAGGTGCTGAGTTAGAGCAACACAGGGAGGCTGAAGAAGGGCATGAAAAGGAAAGTGA GGCTGAGATTGTTGTCAATGATGAACAGAGGAGAAGTGCTGAGTTAGAGCAAGACAAGGAGGCTGAAGAAGCGCATGAAA AAGAATTTGAGGCTGAGGTTGTTGTCAATGATGGACAGAGGAGAGGTACTGAGTTAGAGCAAGACAAGGAGGGTGAGTCA GTGCAAGAAAAAGAAATTGAGTCTGAGGAACAGATTCGTGATGTGGATGACAATGATGAAGTAACTGAAAATGACAAGGG GGTAGATAAGGGAAAAAGAAAGGCCAGTGAGGTTCTTCTCAGTGATGAAGATGAGGATTCTGATGCTGAATTTGATCCAA ATGATGAAGAGGCATCCTCTGATTTTTCAATGGATGACAGTGACTACGAAGAAGATTGGGATTGGCTATGTGTGCTTCCT AAAGAGTCTCTGCTGAATATAGCTGAGGCCAATCCAGATCCCACTTTTGCAGAAGGTTCTACTGATCAATATACTCAAGC TGTGAATGAGTCAAGGAACCTGGAGCCTAGTACATATGAGGAATTTGAAGATGAGGATGGTGATTCTGAGGACTTAGAAA GTCCATCAGAAAGCGATGATGAAGGAAAAAGTAGAAGGAAATATCCTAAGTTCAAACCTACTGAAGATGGGGAGGTGGTT CATCTTGAGTTAGGTCTGACTTTCAACAACAAAGATCAGTTTAAGGATGCTGTCAGTGATTTTGCTATCCAAACCAAGAA GAATCTGACAATCACCAAAAATGATAAAAAGAGGATGGTGGTTAAATGTGTTAAGGAGTGTCCATTCTACCTGAGAGCCA GCAAGACTCCTTCAAGGCCTATCTGGCAAATTGTAAGCTTCCATAACAACCATAATTGCTGCAGGACAGCCAGTAATAGG CAGGCAAAGACATTTTGGCTTGCTAAGAAATTTATGCAAATTCTGAAACACACTCCAGATTTGAAAGTGAGGGGCTTGAT AGAGGAGGCAAGGGTCAGGTGGGGCATTGTGATAGGGAGGTACAAGGCATACAGGGCAAAGGTCAAGAATCTAGAGATGT TGCATGGTGCAAGTGTGGAGCAATACAGTCACCTGAGGCAGTATGCTCCTGAATTGCTGAGAAGCAATCCTGGATCCACA GTCATTATAAAATCAGCAGTGGGAGTACATGGCCCAGTCTTTGAGAGGATCTACATCTGCTTTCAAGCTACTAAGACTGC ATTTGCCAAGCACTGTAGACCCTTAATTGGGTTGGATGGCTGCTTCCTTAAGAGACTATATGGTGGTCAACTTCTGTCAG CCGTAGGCAAAGATGGAAACAACCAAATGTTTCCAGTAGCATTTGCAGTAGTGGAAGCTGAAACTAAGGATTCCTGGACT TGGTTCTTGAACATTCTACTACATGATCTGAATAGTGTTAAACCTCAAAATTGGGCATTCATCTCTGACCAGCAAAAAAG ATTGGTTCCTGCTATTGCTGAATTGGGTCCAGATGTTGAACACAGATTGTGTGTCAAACACTTATACAGTAATTTCAGGA AGAGGTTCCCAGGAGAAGAGTTGAAGAATGCTTTATGGTCTGCTGCAAGGGCTAGCACAGAACCACAATGGAAAACTGCA ATGGATAACATGAAGGAATTGAATCAAGATGCTTGGCTGGAAATGATGCATGTACCTCCTAAGATGTGGACAAGATCAGC TTACAGCCCACACACACACTGTGATCTCCAGGTTAACAACATGTGTGAGGCATTTAATAGGTCTATCTTGGAGCATAGAG ACAAGCCTATTATCACTTTGCTTGAGGGGCTGAAATTTTATCTCACTAATCGCATTGTGAAGCAGAATGATCTAATGCTT AGGTGGAGAAATAGTCAGCTGTGTCCAATGATTCAGCAAAAGCTTGATATTATAAAGAACCATTCAGAGAGGTGGAGACC TAACTGGAATGGTGATATTGCACATGGACTATTTGAAGTACAGAGGGACAATGATAAGTGTGCTGTCAATGTAGAGCTAA GGACATGCGCTTGTAGGAGATGGGATCTGACTGGGATTCCCTGTGTGCACGCTGTGGCCTGTATGTGGTATAATAACCAT GTGCCAGAGAATTATGTGGACATGGCATACAGGAGGCACACATTTCTGAATACATACAGCCACATAATCCTCCCAAACAA TGGGCCCAAATTATGGCCAGATGTGGAAGCAGCACCTCTAAATCCCCCTTATGTGAGGAGGGCCCCGGGAAGGCCAAAAA AACAGAGGAACAAGGCAAATGATGAGCCTAGCAACCCTAATAGGCTGAGGAGGATTAGTTCCACTGTGAGATGTAGAAGG TGTGGAGAGCCTGGACACAACAAGAGAACCTGCAAAGGTAAAACTGCAGCTGATAGGACAATCCTAGTAGGAGGCAATGA GGCAAATACTCAAGTTCTTCAACCTGAACAGAGAAGGACTACTAGAAATAGAGGTCAGAAGAGGAATGCTCAATCTGGAC CAGGTGAAACTTCAGCTCAAGGTGCTGCAAATAACCAGCCTGCACCCTCTGCTCCAGCAAATTCACAGGCTCAACAAACT GATGCTCAATCTTCTCAGCCTGCACCCACTGCTCCAGCAAATTCTCAGGCTCAACAAACTGGTGCTCCATCTTCTCAGCC TCAGCACATAGCTACTGCATATTCTCAGCCTGCACCTACTGCCACTACATCTCAGCCAAATGCACCAAGGAGGAGAGGAA GAAAGAGGAATGCAGAAGCAATTAGTGGCACTCAGTAG
Protein sequence (LotjaGi1g1v0182500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKVHHRGEITFDPNMPYESGLCQSFEHMDVDHISSIVVGNLVKYLGYPSFKCLWYRHVASDGSVCFSPLSNDEDVREFFE NVKGVAEVDIYVEHLVEDPNIVPLIAYKSAEDTPEVLQVGSESDDEVLQDREGETETVKEAELVQDKDGQSVQEIQIDAE VLQPEQRRGAELEQHREAEEGHEKESEAEIVVNDEQRRSAELEQDKEAEEAHEKEFEAEVVVNDGQRRGTELEQDKEGES VQEKEIESEEQIRDVDDNDEVTENDKGVDKGKRKASEVLLSDEDEDSDAEFDPNDEEASSDFSMDDSDYEEDWDWLCVLP KESLLNIAEANPDPTFAEGSTDQYTQAVNESRNLEPSTYEEFEDEDGDSEDLESPSESDDEGKSRRKYPKFKPTEDGEVV HLELGLTFNNKDQFKDAVSDFAIQTKKNLTITKNDKKRMVVKCVKECPFYLRASKTPSRPIWQIVSFHNNHNCCRTASNR QAKTFWLAKKFMQILKHTPDLKVRGLIEEARVRWGIVIGRYKAYRAKVKNLEMLHGASVEQYSHLRQYAPELLRSNPGST VIIKSAVGVHGPVFERIYICFQATKTAFAKHCRPLIGLDGCFLKRLYGGQLLSAVGKDGNNQMFPVAFAVVEAETKDSWT WFLNILLHDLNSVKPQNWAFISDQQKRLVPAIAELGPDVEHRLCVKHLYSNFRKRFPGEELKNALWSAARASTEPQWKTA MDNMKELNQDAWLEMMHVPPKMWTRSAYSPHTHCDLQVNNMCEAFNRSILEHRDKPIITLLEGLKFYLTNRIVKQNDLML RWRNSQLCPMIQQKLDIIKNHSERWRPNWNGDIAHGLFEVQRDNDKCAVNVELRTCACRRWDLTGIPCVHAVACMWYNNH VPENYVDMAYRRHTFLNTYSHIILPNNGPKLWPDVEAAPLNPPYVRRAPGRPKKQRNKANDEPSNPNRLRRISSTVRCRR CGEPGHNKRTCKGKTAADRTILVGGNEANTQVLQPEQRRTTRNRGQKRNAQSGPGETSAQGAANNQPAPSAPANSQAQQT DAQSSQPAPTAPANSQAQQTGAPSSQPQHIATAYSQPAPTATTSQPNAPRRRGRKRNAEAISGTQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 163 | 308 | 146 | - | – | |
| MobiDBLite | 164 | 251 | 88 | - | – | |
| Coils | 192 | 219 | 28 | - | – | |
| MobiDBLite | 259 | 280 | 22 | - | – | |
| MobiDBLite | 281 | 308 | 28 | - | – | |
| MobiDBLite | 349 | 391 | 43 | - | – | |
| MobiDBLite | 359 | 377 | 19 | - | – | |
| PANTHER | 380 | 888 | 509 | 5.2E-102 | – | |
| PANTHER | 380 | 888 | 509 | 5.2E-102 | – | |
| Pfam | 402 | 464 | 63 | 1.9E-12 | ||
| Pfam | 596 | 691 | 96 | 1.6E-19 | ||
| Pfam | 838 | 873 | 36 | 8.6E-6 | ||
| ProSiteProfiles | 838 | 879 | 42 | 9.248 | ||
| SMART | 854 | 881 | 28 | 1.9E-7 | ||
| MobiDBLite | 922 | 1105 | 184 | - | – | |
| ProSiteProfiles | 957 | 972 | 16 | 9.373 | ||
| MobiDBLite | 961 | 975 | 15 | - | – | |
| MobiDBLite | 984 | 999 | 16 | - | – | |
| MobiDBLite | 1006 | 1088 | 83 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of LotjaGi1g1v0182500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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