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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0184800 |
| Transcript ID | LotjaGi1g1v0184800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Formin-like protein; TAIR: AT1G70140.1 formin 8; Swiss-Prot: sp|O04532|FH8_ARATH Formin-like protein 8; TrEMBL-Plants: tr|V7B0Z2|V7B0Z2_PHAVU Formin-like protein; Found in the gene: LotjaGi1g1v0184800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:36175144..36179151) extracted from Lotus japonicus Gifu genome v1.2.
TCTAAGTACAGCGATGCGATGCAACATAATGGGTTTAAATTAAATTAACAAACCACTTAATTTTACTAATTGTTTTCATT TTTATCAGGTATATTTTCAACTCTCCATCCCAAAACTTGCCGACCCTATCTGTGATTTCAAGGGTCATCAATTGAAATTG TCATTTTTAGGCCAAATGGTGCTGCTTCTAATATGGCACCAGTGACAACTACCTCATTGAAATTGTCAACAAACAGTCGC TAAATACATTCAAAACATAACAACACAACATTTGTTCTCTTATGCTCTTTTCCTATGGCCCTTCAACCAGATTACTCACT CACATTTCACTCTTGCCTTGAATGTGTTCACCTGAATGCCCATTAGAACATCTCCAACAAACACTTCATCTTCTCACTCC CATCTCAAACTTCGTCAATGTCACCCCCAACTCATGCAATTGCAAAGGCTGTGGTTGCCACTGCTGTGATTACTTTTTTC ATTGCAGGGTTTTTCTTCTACTTCTTCCAAAAATTTGTTCTTGCTCGATACCGCCGGCGAAACCAAGTGGCTGCAAGATT TCTTCAAGATCAAGGAGAAAGCCATGTAGATATACAAAAATTTGGTGGTAATGTGAGAGGACTAGTTGTTGAAGAAAATG GGGTTGGTGTTCTTTACATGATGGACTCAGAATGCAGAGAAATGAGAACTGGCTTCCCAAATAGTATATTCAATCCAAGT TTTGAAGATCATGAAGAGGAAAAGAGAATAATAGATGTAATGGTCCAAAGACAACACTTGCAACAATCACCTGAGTTAGC ACTTTCTCTTCCACCTCTACCAAAACCTTCACCAATGAATCATGAGAAGAAAAATCAACCACCACCACCACCTCCACCTC CTCCTCCTCCTCCTCCACCACCTCCTCCTCCGCCTACCCCTCCTCCTCCCCCTGCTCCTCTTCTTTTTCGTCGTCCTCCT CCTCCTCTTTTTCCTCCTTCTCCACCACCACCACCTCTGCCTTCCTCTCCCACCACCATACATAGAAAAAGTGCAGCATC ACCACCTGGTCCACCTCCACTTCCAAGCAGTGGCTTGTTCTCATCTTTCAAACCCCCACCTGCACCTAAAGGGAAACCAA ACAAAAAAATCACCAAAAAGGCTGCAGTGGGGGAGAGTTCAAGAGAGAAGGGTCCTAGCCAAACCAGGTTGAAGCCTCTA CATTGGGATAAGGTTCTAGCCAATGTTGATCATTCAACTGTGTGGGATCAGATCAACGATGGCTCTTTTAGGTAATAACT TAATTAGTTATAATTTGACTAGTTTATGTTTATCAAGCTTACATTGTTTTAAGAAGTGCTACATCAACTATATTTGCAAA AAATGACTTTATAAATGGAAGAGCAGTTCTCCTAAACTAGCTTTGGGATATAGTTAGACCTAACCCGAATTCTAATGTCA ACTTCACAATTTTCAAGTCCATTTCGGTAATATCTTACTTTATATTGTTTGGTAAGCATATTTTACTTCTTATTAATTTG ATTAGTTTATATTTTTCATGATTACATTGTGTTAGGAAGTCTCAGATTGACTAGAGATATGACAAAAAAAGTGCTTATAT ATGGAGGAGAAGTTCTCACCCTTAAGCTAGCTTTTGGGTAGAGTTAGGTCTAACCCGAATTCTAATGTCTTCTTCACAAT TTGAGTCCTTTTCCCTTTTTACAGGGTTGATGATGAACTCATGGAATCACTCTTTGGATACTCAAACAGTTACAAAACTA ATGAAACAAAAAAAGCTCTTTCCAACTTGGCCAAGTCCAATTCCAACACACCATCTCAGATATTCATCCTCGAGCCACGA AAATCACAAAACACAGCAATTGTGCTAAGATCACTAGCAGTATCTCGCAAGGGAATCTTGGAAGCACTGCTCGAAGGTCA GGGTCTCAGTGTTGAGACACTTGAAAGGCTCACCAAAATAGCTCCTTCTCAAGAAGAAGAAGCCAAAATCATCCAATTCA GTGGCAACCCAGATAAGCTTGCTGATGCTGAGTCATTCTTATACTACATCCTGAAAGCAGTTCCAACAGCATTCAACCGT TTGAAAGCAATGCTTTTCAGGTCAAATTATGACTGTGAAGTTCTTCAGCTCAAGGAGAACCTCCAAACAATTGAAATGGG TTGTAAGGAGCTGAGAAATAGTGCTCTTTTTCTGAAGCTCCTTGAGGCCATTCTCAAAGCTGGGAACAGAATGAATGCTG GAACCTCAAGAGGCAATGCACAAGGTTTCAACTTGAGTGCTCTTAGAAAACTTTCTGATGTAAAAAGCACAGATGGGAAA ACCAGTTTGCTTCACTTCATAGTAGAACAAGTAGTTCAGTCAGAAGGGAAAAGAGAAATTATCTATCAAAAGCACAATGG TGAAATCATACAAGAGGCAGAGAAAGAGTGTCTAATGCTTGGTTTTCCAGTGTTAGGTGGGTTAAGTGATGAGTTATATG AAGCAAAGAAAGCATCGAGCATTGACTACCACAATTTCATTACTACGTGTTCCAATCTCAGTGCTCATGTTGGTGAAATT AGACAGATAATAACATGCTGTGGCAACACTGAGAGAGGTGGATTCACTAGGGAAATAAAAGGGTTCCTAGAGGAATGTGA GGAGGAGCTTAAGGTGGTGAAAGAGGAGCAGAAAAGGATCATGGAGCTTGTGAGAAAAACAAATGAGTACTATCTAGCAG GAGCAATATCCAAAGATAACATGTCAAACCCCTTACAACTGTTTGTTATTGTGAAAGATTTTGCTGACATGGTAGATCAG GCTTGCATTGAACTAAAAAGGAAGATGGAAAAGAAGAGTGTAGGAGGAGAGCCTGGATATTCAACACCACCTTTGTCACC ATCAAAGAGGACAGCACTTAGATTCCCTAACTTTGATTTGTATTTTCTGTCAAATAGGTCAGAAGCTACATCTTGCAGCC TGTCAGAAGATGATTTCTGAAGATTGGTGTTGCATTTGTTTGTATCAATGTGATGGTTCCTACAAAATGTTCATTAGAGT TCCTTCTTTGATCATAGATTTGACATGTAAAACTGTAATTTCGACGAACTTTAAAACTTCAGTGGTGATTCGATGTAGTT GAAGCTAATGGTGTCATTTCTGAGTCAGACAGGCATTATAGACTTGGCTTAAATAACTTTCTGATAATTGTAGCTTTTAC ATTAATCTTTCTTGCCAATTACGGCCGTAGCAACTCGCATTTATCAGTAACTCCGCAGCGTAACGGCAATCGCAAATTAA CACCCTGGCTATTGGAACTAGCATTTCTGTTGACGGAGGTTTGTTCTGATGCTTTCTGGATCACCAATCAGTATCATGTG GTTTATCTATATGTTTTCTTGGTTCCTTACCCTTATCTACATCTAAGCTCACATCTCCCCTAGGTGACTCAGTTAATCTC TCATCATCTTCATCTATAGGCTCTCCCTTACTCTCCTCATTATCTCTAGGGCTATTTACTTTATCCTCACTTTTTAAAGT TGTATAATTAATGCACTGAGTGGGGTTTACCCCAGATATTTCAAGAAATGTACCTTGGGACATAGAAGAATAGTTATCTT GTTGAGTTTCTGACTGTTTTATGTTTGGCTAGTATGTCCAATCTAGATGCTATTTGGGTCATGTAATAAAAAAGACAAAG ATTACCAAATATTTTCAACAACTTTATTAGAAGAATAAATATATGTGAGCCCTGAAGAGGGGTCACAGCCCTGAAGAGGG GTCACAGCTGCTTTGGGATGCTTGATTCTGATAACTTATGCAGATGAAGTCTGAATCCATTGTCATATTCCTTTGCTAAG GTTTCTAAGTTGATCATATTCCTTTTGTGATTATCATAGAAAGCTCCATCCATTGTCAACAAACTAATATTGATATTCCA AAGATACCTCTCATTATCTCTTGTAGCCTATTTGTTCATACACCCTCATCAGTAACTAACTTCCCCTTCCTCTTTTCTCT CTCTTCAG
CDS sequence (LotjaGi1g1v0184800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCACCCCCAACTCATGCAATTGCAAAGGCTGTGGTTGCCACTGCTGTGATTACTTTTTTCATTGCAGGGTTTTTCTT CTACTTCTTCCAAAAATTTGTTCTTGCTCGATACCGCCGGCGAAACCAAGTGGCTGCAAGATTTCTTCAAGATCAAGGAG AAAGCCATGTAGATATACAAAAATTTGGTGGTAATGTGAGAGGACTAGTTGTTGAAGAAAATGGGGTTGGTGTTCTTTAC ATGATGGACTCAGAATGCAGAGAAATGAGAACTGGCTTCCCAAATAGTATATTCAATCCAAGTTTTGAAGATCATGAAGA GGAAAAGAGAATAATAGATGTAATGGTCCAAAGACAACACTTGCAACAATCACCTGAGTTAGCACTTTCTCTTCCACCTC TACCAAAACCTTCACCAATGAATCATGAGAAGAAAAATCAACCACCACCACCACCTCCACCTCCTCCTCCTCCTCCTCCA CCACCTCCTCCTCCGCCTACCCCTCCTCCTCCCCCTGCTCCTCTTCTTTTTCGTCGTCCTCCTCCTCCTCTTTTTCCTCC TTCTCCACCACCACCACCTCTGCCTTCCTCTCCCACCACCATACATAGAAAAAGTGCAGCATCACCACCTGGTCCACCTC CACTTCCAAGCAGTGGCTTGTTCTCATCTTTCAAACCCCCACCTGCACCTAAAGGGAAACCAAACAAAAAAATCACCAAA AAGGCTGCAGTGGGGGAGAGTTCAAGAGAGAAGGGTCCTAGCCAAACCAGGTTGAAGCCTCTACATTGGGATAAGGTTCT AGCCAATGTTGATCATTCAACTGTGTGGGATCAGATCAACGATGGCTCTTTTAGGGTTGATGATGAACTCATGGAATCAC TCTTTGGATACTCAAACAGTTACAAAACTAATGAAACAAAAAAAGCTCTTTCCAACTTGGCCAAGTCCAATTCCAACACA CCATCTCAGATATTCATCCTCGAGCCACGAAAATCACAAAACACAGCAATTGTGCTAAGATCACTAGCAGTATCTCGCAA GGGAATCTTGGAAGCACTGCTCGAAGGTCAGGGTCTCAGTGTTGAGACACTTGAAAGGCTCACCAAAATAGCTCCTTCTC AAGAAGAAGAAGCCAAAATCATCCAATTCAGTGGCAACCCAGATAAGCTTGCTGATGCTGAGTCATTCTTATACTACATC CTGAAAGCAGTTCCAACAGCATTCAACCGTTTGAAAGCAATGCTTTTCAGGTCAAATTATGACTGTGAAGTTCTTCAGCT CAAGGAGAACCTCCAAACAATTGAAATGGGTTGTAAGGAGCTGAGAAATAGTGCTCTTTTTCTGAAGCTCCTTGAGGCCA TTCTCAAAGCTGGGAACAGAATGAATGCTGGAACCTCAAGAGGCAATGCACAAGGTTTCAACTTGAGTGCTCTTAGAAAA CTTTCTGATGTAAAAAGCACAGATGGGAAAACCAGTTTGCTTCACTTCATAGTAGAACAAGTAGTTCAGTCAGAAGGGAA AAGAGAAATTATCTATCAAAAGCACAATGGTGAAATCATACAAGAGGCAGAGAAAGAGTGTCTAATGCTTGGTTTTCCAG TGTTAGGTGGGTTAAGTGATGAGTTATATGAAGCAAAGAAAGCATCGAGCATTGACTACCACAATTTCATTACTACGTGT TCCAATCTCAGTGCTCATGTTGGTGAAATTAGACAGATAATAACATGCTGTGGCAACACTGAGAGAGGTGGATTCACTAG GGAAATAAAAGGGTTCCTAGAGGAATGTGAGGAGGAGCTTAAGGTGGTGAAAGAGGAGCAGAAAAGGATCATGGAGCTTG TGAGAAAAACAAATGAGTACTATCTAGCAGGAGCAATATCCAAAGATAACATGTCAAACCCCTTACAACTGTTTGTTATT GTGAAAGATTTTGCTGACATGGTAGATCAGGCTTGCATTGAACTAAAAAGGAAGATGGAAAAGAAGAGTGTAGGAGGAGA GCCTGGATATTCAACACCACCTTTGTCACCATCAAAGAGGACAGCACTTAGATTCCCTAACTTTGATTTGTATTTTCTGT CAAATAGGTCAGAAGCTACATCTTGCAGCCTGTCAGAAGATGATTTCTGA
Protein sequence (LotjaGi1g1v0184800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSPPTHAIAKAVVATAVITFFIAGFFFYFFQKFVLARYRRRNQVAARFLQDQGESHVDIQKFGGNVRGLVVEENGVGVLY MMDSECREMRTGFPNSIFNPSFEDHEEEKRIIDVMVQRQHLQQSPELALSLPPLPKPSPMNHEKKNQPPPPPPPPPPPPP PPPPPPTPPPPPAPLLFRRPPPPLFPPSPPPPPLPSSPTTIHRKSAASPPGPPPLPSSGLFSSFKPPPAPKGKPNKKITK KAAVGESSREKGPSQTRLKPLHWDKVLANVDHSTVWDQINDGSFRVDDELMESLFGYSNSYKTNETKKALSNLAKSNSNT PSQIFILEPRKSQNTAIVLRSLAVSRKGILEALLEGQGLSVETLERLTKIAPSQEEEAKIIQFSGNPDKLADAESFLYYI LKAVPTAFNRLKAMLFRSNYDCEVLQLKENLQTIEMGCKELRNSALFLKLLEAILKAGNRMNAGTSRGNAQGFNLSALRK LSDVKSTDGKTSLLHFIVEQVVQSEGKREIIYQKHNGEIIQEAEKECLMLGFPVLGGLSDELYEAKKASSIDYHNFITTC SNLSAHVGEIRQIITCCGNTERGGFTREIKGFLEECEEELKVVKEEQKRIMELVRKTNEYYLAGAISKDNMSNPLQLFVI VKDFADMVDQACIELKRKMEKKSVGGEPGYSTPPLSPSKRTALRFPNFDLYFLSNRSEATSCSLSEDDF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 6 | 126 | 121 | 8.5E-297 | – | |
| PANTHER | 6 | 126 | 121 | 8.5E-297 | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 12 | 30 | 19 | - | – | |
| Phobius | 31 | 709 | 679 | - | – | |
| MobiDBLite | 122 | 259 | 138 | - | – | |
| MobiDBLite | 130 | 198 | 69 | - | – | |
| PRINTS | 137 | 149 | 13 | 5.2E-10 | – | |
| PRINTS | 150 | 171 | 22 | 5.2E-10 | – | |
| PANTHER | 168 | 708 | 541 | 8.5E-297 | – | |
| PANTHER | 168 | 708 | 541 | 8.5E-297 | – | |
| PRINTS | 176 | 192 | 17 | 5.2E-10 | – | |
| MobiDBLite | 207 | 233 | 27 | - | – | |
| SUPERFAMILY | 209 | 662 | 454 | 5.23E-83 | – | |
| MobiDBLite | 239 | 258 | 20 | - | – | |
| Gene3D | 245 | 661 | 417 | 1.2E-76 | ||
| SMART | 248 | 663 | 416 | 1.9E-103 | ||
| ProSiteProfiles | 248 | 674 | 427 | 49.797 | ||
| Pfam | 250 | 648 | 399 | 4.9E-103 | ||
| Coils | 593 | 616 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0184800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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