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LotjaGi1g1v0187700.4

Overview

Field Value
Gene ID LotjaGi1g1v0187700
Transcript ID LotjaGi1g1v0187700.4
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Protein serine/threonine kinase; TAIR: AT3G51270.1 protein serine/threonine kinase; Swiss-Prot: sp|Q54T05|RIO2_DICDI Serine/threonine-protein kinase rio2; TrEMBL-Plants: tr|K7LRG4|K7LRG4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0187700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:36747343..36754415) extracted from Lotus japonicus Gifu genome v1.2.

ATGAAGCTCGATGTAGATGTCTTGAGATATCTCTCCAAAGAAGATTTTAGGGTTCTCACTGCTGTCGAATTGGGCATGAG AAACGTGCGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACCTTTCTCCATCTACAACTGTTATGGTTTTATGATTCGAA TTGAATTGCATCCCACTCACTCAATTTTTCCTCCTTGCAGCATGAACTTGTGCCTACTGAACTCATTGATCGAATCGCTC GTCTCAAGTATGTTTCAGTGCTTTTTTTTCGATTTACCTTCTTTTCCCTGCTTTTAATGGTTTGCAAACGTGAACTTGTG CAGGCATGGTGGCACGTACAAGGTTTTGAAAAACCTGCTCAAGCATAAGTTGTTGCACCACGACTCTTCTAAATGTTGGT ACCTTCTAAATAACTATTTAATTTCACATGCAAATTGGTCATGAACTTATTGGTACGTTAAGGGATTAAGTTGTATAGAT GCAACCAAAGCTACACAAGTCACATCTTTCATGGATCAAATTGTGTATTTACTTTATTTAAGTTTATCTCGACCGCCCTC TGATCTGTTAAACCTTACTTTGCTTGTAGATGATGGGTTCCGCCTTACTTACCTTGGTTATGATTTTCTTGCCATTAAAA CTATGGTCAACAAAGGAGTGTTTGTGGGTGTTGGTCGCCAGATTGGTGTTGGAAAGGAATCCGGTACTCTTTTTTCATTT ATGGCGTTGATGCTCTAATGTCATATTTCAGTCTTTTCCTAATTATAGTGTTTGTGCTCTGCTAGATATATTTGAGGTTG TCTGTGAAGATGGAACAATTCTAGCTATGAAGTTGCATAGGCTTGGTAGGGTTTCTTTTAGGGCTGTCAAATCTAAGCGT GACTACCTCAGACACCGAAGTAGTTATAATTGGCTGTATTTGTCTCGTCTTGCTGCACTTAAAGAATTTGCTTTCATGAA GGTTTTCCCTCCCTGTCCTGTCCCCTCTTCAATATATTTACCTTTATATTTGAATTATTTTCTTCTTTTATGATTTGCTA ATGAGACAGGTTTGCTTGACCAGGCTCTGGAAACACATGGCTTTCCTGTTCCGCATGCTGTTGAAAATAATAGACATTGT GTAGTTATGTCACTTGTCCAAGGTTACCCTCTGTAAGTGTCCTTTTCTTTGCTAATGACACTTTTGTTTCACATCTCACC TTTACCATAATATTTGCTTTAGATCATAAATATTCTTGTAAGCTGTACCATGAAATTCTTGTTACTAGTACATTAATGCT TACAGATTTTAGGGAACTGAAATGTATTTTGGTTCAGAAAAGAAATTTTGGGCCCTCATTCATGTTACATATGTCTGCTT TTGTAAAAATCCTGGCCAATTCTTGTTGGACACGTTTTCCTAGCTGTTAGTAGTACTTTTTGGGGCTGCTGTTTATATTA TTGCTGTGACAATTTGTAAACATTATATTCATGAACTTCTGATTGGTATCATAACAGTACATGGATACACTTTAGAGCTT AGATCCTTGAATTCTCTTTATCTCTCATCTTAGGCAGATCGATAAGCATGAAACCATTGTATCATTCTTAAAGCAGTGTA TTACTTTATTAAACGTGTGCTGCATTTTTGCCGAAAATCACTGCTTTCAATTCGTATCTTTTAGTATTCTTGTGAAGAGA TTACATAATACAAGTTTCTTAATGATCTTTGCATTTGTTAATGATCTTTATTCCTTTTTGTGTTTTATACATTGTCTGTT AAGCTGACTTTCCCTTATTTTGTTGGTTTTTGGGACAAATTTGCTTGAATTTGTCATTGGGTTCTGCTAGTGTTCAGGTG AAGCAATTGGAAAACCCAGAGACAGTTTTTGAGACAATCCTTGGTGTAGTTGTTCGACTGGCAGAGCACGGTCTCATTCA TTGCGATTTTAATGAGTTTAACATCATGGTATTATAGAATTACTTCATCTTTATATCTGTTTGGGGGGCTAATGCATTTG TCAGCATAATTGTTAAAGAGTATTCTAAATTTCATGATAGCTGTTATTGCATTGGCTTCTGCTTCTGCTTTACACTCTGC TTTCGTTTCATTTAGATCAATGATGATGAAAAGATTACCGTGATTGATTTTCCACAAATGGTATCCGTGTCACACCGTAA TGCACAGATGTAAGAGTCTCCTCCTTGTATGATACAGCATTTTTCTCGTGATTTATCATTGGTTTCATGCTTGTATAAAT GCCAACTTTTGTTTTTATCACAATTATAAGCAGAACCTATGACTTGCTGTATTTACAGTTTATTATTATTTGTTAAGGAA GTGTAATATGCACGGCATTTGCATTCCAATATACACCTACATATTTGCATTCTTTACACAATTACACCTATATATTTGCA TTATGTGTGAACAGTTCAATACTTTTTTTTGGGGGGGGAGGTTTAATTGTTGATGGATATAACTGTACACTATGTTTCAA GGTAATTTGGATGGATGGAAGTTGGTCAAAAGGAATATGATTGAAAAATAGTATCTTGATGTGTTTGGGTGAGGGATAAA AATAGAGGGGGAAGGAAAACTGACCATGAATAGTAGCATGTCAGGTTTCCTTCCATTCATGCCAAGAAAATGACAATGAA GAGGGAATTAGTGGTAAAATTACATTATGGTCCAATCCACTTACGCTAGGTTGCTTCCAGGATTTTTACTGTCTACACTT ATGTGGAGTGGTACCACACTATTTTGAACACTTTCACATAATTCGTATTATTAATTTATAAAATATTAATAGTTTTAGGG AATTTTGTATAAATATTTGTAGATTTTTATATTCAAAAATTATAAATTGAATTTGTCACAATTTATTTTGATTTTTTATT TAGAATATAATTTTAATATTTAATTAAAGTTTGTGAATTTGTTTTCAAGAATAATTTTAAAACTACTTTGAAAAATGTTA AAGAATTTTTTTAAATATTGTAATTTTAATTTGATATAAAATCTACATTATAATCATTTGAAATATAAAATAAAATGTGT AGCAATAATATTTTGTTAAAGGGTAAAATAGTACTAATGAAAACATCACTTTCACTTTTCCGTACACTGTCCCTTCTTTT TCTCTCAATCCAAACAACTTAAAAATCATCTCATTTTCCTTTAATATTCTTTCCTCTTATAATTTGTTCTCTTATATTCC TTCCTCTCATATTCACCTCTGTATCCAAACAAAGCAGTATTTCTAGGTCATCGAATGTATTGTATTAAGGGAAAATCCAA ATTCTTTTTTTCTTTCTCATTTTCAACACCTTTATCAAATATTATGTGGCTTAACTGCTTATCATTCCTTGTTTTAGGTA CTTCGACCGTGATATTGAATGTATCTTCAAGTTTTTCAGAAAGAGGTTTGTACTTATGTTTGGATAGCTTCTATGAACTT TGGAGTGGCCTTTGCATATATACTGTACCATATAATGGTGGTCTTGGTGACTCATATTGTTGTTCAAAATTTGAAAATGA TTTTATCTGATCACTTGTTGAAACTGCTGGCTGAACTTCTATAAGTTAGTAACTAAGTGTGTCTGGTATTTTAAGTTGAA ATAACTTGTTAGAAGTTGCAGTTAGTGCAAGATATCAAGGACATGGTTGGAGGACTTGGTATCATGATTCTTCGTGTGTA TTTTCTTTTAAGTCCTTTCATTGTCTTGTTTTCTTCAGATAAAGAGCTTCGTCTAACGTTACATTTCAATAAAATGTTGT AATTATATCCTTTATTGTTTTTATGTGGCATGACAGTATGTTGGACTTCTGAATGAAACTATACGTGATCTATGCCCTGA ACTCTTTTATATATTTTATGCCTTTAGCTTACCTATTGAATTAATTGTTAATTTTTAGTATATAGTACTTTAAGCATATC ACATTACCTATTGATTGAAATGATAGATGTATCTTTGGTTGCTTTGAAAGATTTTGGATCTAGTCTGTGGCTGCTTAATC AGTTACCAGTCTGCACTTCTCTATTTCAGGTTCAATCTTACTTTTCAAGAAAGCATAGATGATATTGATGATTCTGATGA AGGGAAAGATGAAGGTGGAAGGCCCTGTTTATCGGAAATAGACAGAGGCACTGGTTCTCTAGATAGGGAACTTGCTGCCA GTGGCTTTACTAAAAAGGATGCAGAGGATATTCAGAGGGTATAGTGGTTTTCTTGTTCTGTGTGAGAAGGGGAGGAAACC ATAGAGACCATTTTGTATCGAAATCCAAGATTATTTTGCATTTGTGTTTTCCACCTGTTATTGCTTAGCTGCCAATAGCC AACATGAATTCTCTATTTGGCAAGCCAAAATATCATTATCATACTTAGGGATTGGATTTACTTAATGCATTGTGAGTTAA GCTTTCATCTTGCATTTGATATTGCCTCAAAGATTGTCAAATTTATGTGCAGTTCATTGAAGGAACGGCAGAGAGTGATT CAAATTCAGATAGTGAAGGGGTTGACTCAGTGGAAGATCTGAATGAAGCAATCATTAAAGATGATGATTTTTCATATTTG TCGGAGCAGGTAATATTTCAATTAGCTTTCATTGTTATAAAAGAGACACAAGCTATGGATCTCATGTTCTGAGGATTTGT GTGGTTTTCTTTCTGAGTGCTTTGTGTTTTGGTGTAGAAAATGGAAACCGGAGTTGCTTTTTATTTATTTCATTTGCTAA ATAACTTAGAGGACAGAAGTATGTGTAAAGAGATGGATATGATATCCTTAGCAATGGCAGCTCGAGGAAACAAAAGAAAG AAATAACAAGCTCATTTGTTAGATATTGCCCGGAGTTCTTCAAATTAGTACTGTACAACTGAAACTATTAAAGCCTTTTC TCACTAGGTGGAACTTGATACATTGATCAAATGACGTCACAATTTGCTATAAAAAATCATGCCTAGTGATAGACTATTTA AATCTAAATCTCCCAGTAACATGGTATTGTAACGTGACAAATGTAAGAATTCGGATGTGTTCTTGAAAATGATTACTTTG TTCAAAACATAAACCATAAAAATAGCTAAGATAGCACATTGCTTCCATAATTTTTCTCTCCTATGCTCTGCAAAATCCCT TGAAAAATTGGCCAAGAAGGAAAATGTTCAGCTAAAATGACTGATACACCCAAGATATCAGTCACATTTTTATTCTGTTA TTCATGCAAATATCTGAGCTTTAAATTTCTACTTCTGATGCTCAGAATATTCTTAAAATTTCAAAATTTGTATTTTGAAA ATTTTGTAAATATCATTCTGATCACCCTCCTAAAATAGAATTTTTAGTAAACTTGAGAACAATTATTCTTGTACTTATAT TTGTTCAGGAACAAATAACCACTAGTCTGTTACTACACAGGTTACTCATTACTTTTTCTTTAACTGAATATTTTTGCTAA GAGTTCCTTTTTTCCCCCAAAGAATTTTTTCTTCAGTTGATTGAAAATCATACTGGGTAGACTCCATTAATAATGGGAGA GAATAAAATTCTGTTAGTACATTATCGGTGCTTAGTTTTGTATCTGCAAAAAGGTTGGAGTGGATATGAAAGCCTTGTCG ACAGTAGTGGAAGTGGCCATGTGCAGTGGAGATAACAAAGGTGGATATGGACAAAGGAAATCACTTACATTTTATCCAGC AACTTCTGCAAATGAAAGGGGAGGGTTCAAGTTAGCTATTAATTTAATCGTGGTAAATGTTACACATAAGCCAGATTGAA TGGCAACATGGGAAAACTTAAGACAGCTTGGTCTTTAACTTCAAATGAATAATGATCTGTTTATGAAAGATGTACTAAAA TAGGTTACATAAGTTACTTAGTTTTAAGTAAAGAACAATGGTCGTCAAAAATCTGTTGATGCCTTTACTCAGCACAAGCA CAAATATAATCAATTGTGGATGATTATGGGCACTTGTTGAGCAAACTAGTGCTGGAGAGTATAGAACGATCTGTTTTATG TTTGAAGATACCAACTTGCGATCTGGGCTTGAGGAGTTTGATATCAAAGCTTTTGTGATAAGAATATGTGATTTAATGTG AGAACTTCTGTATATGCTAACTGAACTTGTTAGATGTATACATGAACTTCTGATACTTCATATGAAATTTGCGGATAGTT CACCCACCGACTGGTCTGCAAAGATGGTCTGCCTATGATTTTTCTGCTTATATAACTACTTGTGCCATTCTGTTTTCTGC AATCTTTATTAAAAGAATTGGTATTTTACTCATAAAATGAAAACATGTTTTAATTAACCAGGATGATGAACATGAAAGTA AAGGAATAGAGGAGAGCTGTGAAGCTGGTCAAAGCTATGCATCTGACAAGGGAGATGCTAGTGATGAGGTGAGTTATCTC AATTTTACGTTTACTTCCTCTCCCTTATATTTCAAAATGAGGAATTTCAAGTCCTCAAGGGTTATTGATGTGTTCTTTGC GAAATAGCGTGTCTTATCAAACAAGAAATGCTAGGGCTTCTCTTTTAATTTCTTTACTAATGCTGAAGTTAGCCATCAAT TAGTACATGATTCATGGAACCTAATATGGGCAAGTTAAAAATGGGAGCTCAATGAGTTTCCAAATGTAGTTTTTTTCTTT ATCTTAGGCTCATTTTATTATTGTAACTGTGTTTAGTATAGAACATTTCATCCCTGTATTACCTTTTGAAAGGTCAAAGT ATTTAACTATATTGTAAACCATTATCAATGTGGATTTGATTCTTTGTCATGATATAAAGGATAATTTTTTTATTATTTCA ATGAATATATGTTATTTTGTTCATATAGTATTTGTTATTTGGGGTTTGCATCAGAATCGTAATGGTAGTGATTCTTATTT ACAGGAAGAGCATGACCAAAATGAAATTGAAAATGACGCTGAACTGAATAAGAGCTTGAATAAGCAGAGACGACATGCGA TAGCATCCGCCCGTCGGGGACGGAAGACTATTGCATCCAGGAATTCTTACAAAGACAAAGGTGGCAGGTCATCTCACAGT TCTAAAGTACAGAAACAGTTAAGCAGCTGGTGA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0187700.4) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAAGCTCGATGTAGATGTCTTGAGATATCTCTCCAAAGAAGATTTTAGGGTTCTCACTGCTGTCGAATTGGGCATGAG AAACCATGAACTTGTGCCTACTGAACTCATTGATCGAATCGCTCGTCTCAAGCATGGTGGCACGTACAAGGTTTTGAAAA ACCTGCTCAAGCATAAGTTGTTGCACCACGACTCTTCTAAATATGATGGGTTCCGCCTTACTTACCTTGGTTATGATTTT CTTGCCATTAAAACTATGGTCAACAAAGGAGTGTTTGTGGGTGTTGGTCGCCAGATTGGTGTTGGAAAGGAATCCGATAT ATTTGAGGTTGTCTGTGAAGATGGAACAATTCTAGCTATGAAGTTGCATAGGCTTGGTAGGGTTTCTTTTAGGGCTGTCA AATCTAAGCGTGACTACCTCAGACACCGAAGTAGTTATAATTGGCTGTATTTGTCTCGTCTTGCTGCACTTAAAGAATTT GCTTTCATGAAGGCTCTGGAAACACATGGCTTTCCTGTTCCGCATGCTGTTGAAAATAATAGACATTGTGTAGTTATGTC ACTTGTCCAAGGTTACCCTCTTGTTCAGGTGAAGCAATTGGAAAACCCAGAGACAGTTTTTGAGACAATCCTTGGTGTAG TTGTTCGACTGGCAGAGCACGGTCTCATTCATTGCGATTTTAATGAGTTTAACATCATGATCAATGATGATGAAAAGATT ACCGTGATTGATTTTCCACAAATGGTATCCGTGTCACACCGTAATGCACAGATGTACTTCGACCGTGATATTGAATGTAT CTTCAAGTTTTTCAGAAAGAGGTTCAATCTTACTTTTCAAGAAAGCATAGATGATATTGATGATTCTGATGAAGGGAAAG ATGAAGGTGGAAGGCCCTGTTTATCGGAAATAGACAGAGGCACTGGAACGGCAGAGAGTGATTCAAATTCAGATAGTGAA GGGGTTGACTCAGTGGAAGATCTGAATGAAGCAATCATTAAAGGATGA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0187700.4) extracted from Lotus japonicus Gifu v1.2 Proteins.

MKLDVDVLRYLSKEDFRVLTAVELGMRNHELVPTELIDRIARLKHGGTYKVLKNLLKHKLLHHDSSKYDGFRLTYLGYDF LAIKTMVNKGVFVGVGRQIGVGKESDIFEVVCEDGTILAMKLHRLGRVSFRAVKSKRDYLRHRSSYNWLYLSRLAALKEF AFMKALETHGFPVPHAVENNRHCVVMSLVQGYPLVQVKQLENPETVFETILGVVVRLAEHGLIHCDFNEFNIMINDDEKI TVIDFPQMVSVSHRNAQMYFDRDIECIFKFFRKRFNLTFQESIDDIDDSDEGKDEGGRPCLSEIDRGTGTAESDSNSDSE GVDSVEDLNEAIIKG
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:1.10.10.10
1 90 90 4.3E-37
IPR036388
PANTHER
PTHR45852
1 290 290 4.4E-159 –
SUPERFAMILY
SSF46785
5 90 86 8.17E-27
IPR036390
Pfam
PF09202
8 89 82 1.1E-34
IPR015285
SMART
SM00090
64 288 225 8.6E-58
IPR000687
Gene3D
G3DSA:3.30.200.20
92 191 100 3.3E-42 –
CDD
cd05144
94 274 181 1.6977E-115
IPR030484
SUPERFAMILY
SSF56112
95 271 177 1.75E-28
IPR011009
Pfam
PF01163
106 280 175 1.3E-51 –
Gene3D
G3DSA:1.10.510.10
192 327 136 1.1E-44 –
MobiDBLite
mobidb-lite
286 326 41 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0004674
Molecular function Protein serine/threonine kinase activity Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0187700.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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