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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0196900 |
| Transcript ID | LotjaGi1g1v0196900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat (LRR) family protein; TAIR: AT3G11330.1 plant intracellular ras group-related LRR 9; Swiss-Prot: sp|Q8VYG9|PIRL9_ARATH Plant intracellular Ras-group-related LRR protein 9; TrEMBL-Plants: tr|A0A0L9UC37|A0A0L9UC37_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0196900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:39849151..39854043) extracted from Lotus japonicus Gifu genome v1.2.
GGTTTTAGTTGCACTAGTGATCCATTAATAGTCCAGTAGCTCTACTCAACCCAGTTTAAAAATAGGGTGTTGTTTTCACA TAGGTCCAGTCCAGTAGTGAGTACACAGAGTCACCACGTTGTCTTTGTTCAAAGATTCTATCGTCAGTGAAGCCAATCCA TTCTCAACTATTTCGACTTTGCAGCTGTGCAGTGCAGTGAAACGAATCGAACAAAGTCACAAACGCAAAAGTTCAAAACG TTATCCTCAACGCAACGCTGCATTGAACCCATCGAATCTATATAGCAACAATCCATCACCATCACCCTCTCAAATCACAC TCCTCTCTCTCATCATGGATCCCAACCCTGGAACCTTTCCGATTCTCTCCTACGTCATGTCCCGCCTCCCTTCCTTCGCA CCCAGGACCACCGCCGCCTCTCCTTCCGATTCCGACCAATTCGACATCGAACAGCCGCCGCCGCCGTCGTCGGAGATCGT CGGCCAAATGCCGCACCTGGCGGACCCGGAGCTCCTGGCCTCTATGGGTCGGGCCATCTCGGACGTCTCGCAGGCTCGCA CCGTCCTCAACCTGATCGGCGAGCGGCCCACCCACGAGGAAGTCGACAACGCGCGGGCAAAGCTGGCGGACATCGACGCC CAGCTCTCCCGTCAGCTAGAAGAGATCGTCCTCCAGTCGAGGCCCACGGAGATCGAGATCCATGGGTGGCGGGCCCACCA GGCCGAGAACGAGAGACAGTGCAGGGAAGCGGCGGAGAAAGAACAGCGCGTTTGGAAATCGGTGTTGCAGCTGGACGAGA TGCACGAGGCGTACGAGAAGCTGCTCAAGGACGCTGAGAACCGGTTGGTGAGAATGTACGAGACTAAGGAAGACGGAGGA GAAGATAATAGGGATCTTGATCTTGATCTTGTTGTAGGGGATGAAGAGGTGCACCAAGAGGTGGTGGGGATTCTGCAGGA GGCAGAGGGGAAGGGAATGGACCGAATCAATCTTTCTGGCCGGAGATTGAAGCACTTGCCGGAGGCATTTGGCCGGATTC ATGGTTTGCTTGTGCTTGACCTTTCAACAAATGAGCTTTCGGTAAAGTCTGTGTTTTTACAGCTTAATTACTATGTGTGT GTGTTGAGATCAACATTCGTTGAATTGCTTTTAAAATAACTAGTTTTGGTAAAGTTGGTTATGTTAAAGTGAGTTCAAAG TGTATACAACTTTGAGAAAAGTGATTTCTATTGTTTTGAAACCCAGCTGTGAAATCTCACTAGTGATTAGGTTCCAAGTT AGGTTTTGTAGCTTCATCCCATAATTGAAACATCTATACACCCAGAAAATGATTTTGACAGCCAAGAATCAATACTGATA TTAATATACGATCGCATCCAAGCACCCTTTAAGTTTCTGCTGGACAAGTAATTCTGGGAGAAGTTTGTAGGGGCAAAGTG ATTATGGGTTTAACTGTGTATTCAAACCTGATTCAAATGGGGCAGAGCAGGGTTGTCGGGTACCTGTTGCAATGCTCAAG TTAGTGAGTGGACTAGTAGAATGACAATAGAGTAACTAAAGGCATTTGAAAACGATATAATATGGTGGCAGACTTGTGAT TTAAACTGAAAACAGAAAATGAAAAATAAACCAAACAGGCTCTAAGGGTACCTGATGGACTATATCTTATTTATGGGCTT CAATGGTGCATTGTTGCTGCTCTAATTTAGCATCATATAAAAAACTGTCTATAATACATGTCAGGGCATAAACCTTTGTT GATTTCGTACTGGTGCCCCACGACGTTACGTGTGAGATGACTGACTATATTGAGATATTTGGGATCTAGAAGGTTCAAGT TGAAAGGGCAACGGAATCTCAACCCACATCAAAGGGGTTGGCCCGTGGATGGACTTTGAGTCAATTCCTAGAATGCTGGC CTATTAGTCTGGACTTTGTTAGTATTTCCAACTTCAAAGGTATACATGTTAGGCAAGAAGGAATCCTTTCATGATACAAA TATTCTTGTCCTGAAAAAAGAAATTGGTATTAAGTTTCGTTTTATATATTATTATAAATTCTGATTGAGTCCAAGTATGA TGGCATATTTTTTCACGTGAGGTAAGGTGAAATTTTAACTGTTAGTGGTTCTATTTCCTGTCTAATGCACAATAGAAATA GGTTTCTTTTAGATGACACTTATCGAGTTATCTACCTATCAGTTATGAAATGAATTGAGCTTGTTTTGGATTTTGAACGT CTAATGCATGTCTCTGTTTGTGTTTTGACAAGCACAGTAATGGAAAGGATAAAATCAGCTATTGTGCTTAAACCTTAATT ATTGCTCCCCTGGTTAATACAGTATCAGTTTGTATACGAGAATTTTCATCGGTGTGCAAATATCAGCTTTCATTTTGAAT ATTTATGCTTCTTGGTGCTCTATTTAAAATCATGTTGGTGGTACTATTTTCTTAGTTCATATAGCCTTTCTTACATGTAT ATGTTATATTCCGTCCTACACAATAGGCAATTCCTGACTCAATAGCTGGATTGCAAAATCTCGAGGAGCTTAATCTTTCT TCAAATCTTTTGGAATCACTGCCCGATTCAATTGGGTTGTTACAGAAGTTGAAATCGCTCAATGTTTCTGGAAACAAGCT GACTGCCCTTCCTGATTCCATCTCTCACTGCAGGTACAGAGTAATTCTTATGAGCTATATTTTTTGTTATTGTCATTGTC ACCAGTTCGAGTTATATTAGTATACCTTGTAGTTTGGAATGCCTAGAAATTTATTGCGGACCCTAATATCCATGCGTTTT AAGAAATAATGGTGGACTTAAATGGAGAGCCTCATACGAGTAATTTGAAAGCTGTGTTGTAAAAAATACCAGACTACTGA AAATGGAAGCCACTTTTACAATGCATGATGAAAATGTTTTTCATTCAAATTTGTCAAACTTTAACTATTGCATTAACATT ATGTTTCGTCCTCTTATTTGTGCTTTTGAGCCTTTCAGAAAGGCTAAATGTCCAAGCATGGTAAAGCATCTCACTAACAG TTGTATGTTCTGTTTCTGCAAATTTTTAAAATCACTGTTGACGGCAGGACAAAAATACTCAAATCGTTTTAGGACCTTCT TCAAACTTTGAATGTTTCATTTATTATTGATTGAATCCCTTTTATATTGAATGGTCAGGTCATTGGTGGAGTTGGATGTA AGCTTTAACAGTCTGTCATATTTGCCAACAAACATTGGATATGAGTTGCCAAATTTACAGAAACTCATGATTCAATTGAA CAAAATCCGCTCTCTTCCCTCGTCTGTTTGTGAGTTGAAGTCCTTACGCCATTTGGATGCTCACTTCAATGAGCTTCATG GGCTTCCAATGGCAATTGGGAAACTGACTAATCTGGAAGTTCTCAACCTGAGCAGTAACTTCACTGACCTTAAAGAACTT CCAGAGACATTTGGTGATTTGACCAACCTCAGGGAATTGGATCTTAGCAACAATCAGATTCAAGCACTTCCCGATACATT TGGCCGCCTTGATAATTTGACGAAGCTAAACTTGGAGCAGAATCCTCTTGAATTGCCACCAATGGAGATTGTAAATCAAG GGGTCCAAGCCATAAAGACTCATATGGCCAAGAGGTGGATTGACATATTGCTGGAGGAAGAAAGGAAAAGCAATCAAGAA ATGCAAGAACAAGGAGAGGGTGGCTGGTTAACACGAAGCACCTCCTGGTTGAAGAATGTTTCTGGAAATGTAATTGGATA TATTGGAGCTGTTGGGTCTCCCATGTCACCCAAATCTCCCAGAGATGCATTCCTTGATCAGCAACTATGAGGTGATGATC AGCAATTAAAATTACTATATCTGCTGCTAAGAAACAAATTCCTAAGACTGAGGTCTGAGAGATGCTTTACTAGCTGATAT CTTTGATTTGCTTGAAGCTTTGGATAAGTCTTGCTGTGTTTTCAAGCAAAGCTGGTGTTTTAAAAACCAATTCAACCGAG GTTGAGGTCATAAATACTTATAAAATTAAATAAGGTAAATCCTTCAATCTCTACGGAATTGATAGATACAGTGGTTGAAT CATGATTAGGAAGGATGCAATGCCTAAACATTATGGTTTATTTTCCATGGTAATCATGGTATTACGGAAACAAGTGACAA AACAAGCTACTAAAATGTAGTGAGTTCTGAATGTAAATATACTCGTGTTCTATCATTAACAGGAAATTTTACTTGCTGCT TTTGTTACATGTTGTCCCTTCACCTGCTTTAAAAAGACTTCTCTTAGCTTCCACAAAAGGTCGTAACCATCTTGCCTTTT CCTTTCCTGTTGTTCATGGTGATATAAAAGATTTAGAACATGACAGGCTTCTGGTAAAGAAGTAAGCACAAATAGAATCA CATAGAATAAGAGACTTATACTTTGTTTGTAGGAGGGGAAATGAAGTAGATAGAAAGAGTTAGAATAGGAGATAATGGGT AGGTTTTTTTGTTTTTTGGATTAATAAAATAGAATAAAAGTAGCTCATAAAAAAAAGTTAAGGTGTACGCCTATATTCAC TTCTTTATGTTTCTCACAATCTTTTATCAATCTTTGCTTTTCTTCCTCCTTTTTGCTCTCATCAAATTTTGATCTTTGCA AACCTCATTAGTGGAAAGAGGCATAAGACAAACCTTTTTGTCCTTGAACACTTTAGAGTATGTGTTTGCCTTGCTGTCCT CATGACTAACTTGGCGATCAAATTGCCAAGGTCTCCCAAATAATACACGGTAAGCCTCCATAGGCAGTTAGGCACCACAT CACATAAGCCTTCATCATGATATTTTCCTATTGACAAAGACGTGCTTGTTGACAACCAACCCCCCACGATTTTGAAGCCA TTGAAGCTTTTAT
CDS sequence (LotjaGi1g1v0196900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCCCAACCCTGGAACCTTTCCGATTCTCTCCTACGTCATGTCCCGCCTCCCTTCCTTCGCACCCAGGACCACCGC CGCCTCTCCTTCCGATTCCGACCAATTCGACATCGAACAGCCGCCGCCGCCGTCGTCGGAGATCGTCGGCCAAATGCCGC ACCTGGCGGACCCGGAGCTCCTGGCCTCTATGGGTCGGGCCATCTCGGACGTCTCGCAGGCTCGCACCGTCCTCAACCTG ATCGGCGAGCGGCCCACCCACGAGGAAGTCGACAACGCGCGGGCAAAGCTGGCGGACATCGACGCCCAGCTCTCCCGTCA GCTAGAAGAGATCGTCCTCCAGTCGAGGCCCACGGAGATCGAGATCCATGGGTGGCGGGCCCACCAGGCCGAGAACGAGA GACAGTGCAGGGAAGCGGCGGAGAAAGAACAGCGCGTTTGGAAATCGGTGTTGCAGCTGGACGAGATGCACGAGGCGTAC GAGAAGCTGCTCAAGGACGCTGAGAACCGGTTGGTGAGAATGTACGAGACTAAGGAAGACGGAGGAGAAGATAATAGGGA TCTTGATCTTGATCTTGTTGTAGGGGATGAAGAGGTGCACCAAGAGGTGGTGGGGATTCTGCAGGAGGCAGAGGGGAAGG GAATGGACCGAATCAATCTTTCTGGCCGGAGATTGAAGCACTTGCCGGAGGCATTTGGCCGGATTCATGGTTTGCTTGTG CTTGACCTTTCAACAAATGAGCTTTCGGCAATTCCTGACTCAATAGCTGGATTGCAAAATCTCGAGGAGCTTAATCTTTC TTCAAATCTTTTGGAATCACTGCCCGATTCAATTGGGTTGTTACAGAAGTTGAAATCGCTCAATGTTTCTGGAAACAAGC TGACTGCCCTTCCTGATTCCATCTCTCACTGCAGGTCATTGGTGGAGTTGGATGTAAGCTTTAACAGTCTGTCATATTTG CCAACAAACATTGGATATGAGTTGCCAAATTTACAGAAACTCATGATTCAATTGAACAAAATCCGCTCTCTTCCCTCGTC TGTTTGTGAGTTGAAGTCCTTACGCCATTTGGATGCTCACTTCAATGAGCTTCATGGGCTTCCAATGGCAATTGGGAAAC TGACTAATCTGGAAGTTCTCAACCTGAGCAGTAACTTCACTGACCTTAAAGAACTTCCAGAGACATTTGGTGATTTGACC AACCTCAGGGAATTGGATCTTAGCAACAATCAGATTCAAGCACTTCCCGATACATTTGGCCGCCTTGATAATTTGACGAA GCTAAACTTGGAGCAGAATCCTCTTGAATTGCCACCAATGGAGATTGTAAATCAAGGGGTCCAAGCCATAAAGACTCATA TGGCCAAGAGGTGGATTGACATATTGCTGGAGGAAGAAAGGAAAAGCAATCAAGAAATGCAAGAACAAGGAGAGGGTGGC TGGTTAACACGAAGCACCTCCTGGTTGAAGAATGTTTCTGGAAATGTAATTGGATATATTGGAGCTGTTGGGTCTCCCAT GTCACCCAAATCTCCCAGAGATGCATTCCTTGATCAGCAACTATGA
Protein sequence (LotjaGi1g1v0196900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDPNPGTFPILSYVMSRLPSFAPRTTAASPSDSDQFDIEQPPPPSSEIVGQMPHLADPELLASMGRAISDVSQARTVLNL IGERPTHEEVDNARAKLADIDAQLSRQLEEIVLQSRPTEIEIHGWRAHQAENERQCREAAEKEQRVWKSVLQLDEMHEAY EKLLKDAENRLVRMYETKEDGGEDNRDLDLDLVVGDEEVHQEVVGILQEAEGKGMDRINLSGRRLKHLPEAFGRIHGLLV LDLSTNELSAIPDSIAGLQNLEELNLSSNLLESLPDSIGLLQKLKSLNVSGNKLTALPDSISHCRSLVELDVSFNSLSYL PTNIGYELPNLQKLMIQLNKIRSLPSSVCELKSLRHLDAHFNELHGLPMAIGKLTNLEVLNLSSNFTDLKELPETFGDLT NLRELDLSNNQIQALPDTFGRLDNLTKLNLEQNPLELPPMEIVNQGVQAIKTHMAKRWIDILLEEERKSNQEMQEQGEGG WLTRSTSWLKNVSGNVIGYIGAVGSPMSPKSPRDAFLDQQL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 24 | 47 | 24 | - | – | |
| MobiDBLite | 24 | 40 | 17 | - | – | |
| PANTHER | 25 | 521 | 497 | 7.7E-185 | – | |
| PANTHER | 25 | 521 | 497 | 7.7E-185 | – | |
| Coils | 90 | 110 | 21 | - | – | |
| Gene3D | 123 | 320 | 198 | 1.7E-32 | ||
| Coils | 150 | 177 | 28 | - | – | |
| SUPERFAMILY | 217 | 440 | 224 | 2.61E-52 | – | |
| SMART | 235 | 254 | 20 | 390.0 | – | |
| SMART | 235 | 257 | 23 | 26.0 | ||
| ProSiteProfiles | 237 | 259 | 23 | 6.218 | ||
| PRINTS | 238 | 251 | 14 | 8.9E-6 | – | |
| SMART | 258 | 280 | 23 | 1.9 | ||
| SMART | 258 | 277 | 20 | 6.8 | – | |
| ProSiteProfiles | 260 | 281 | 22 | 9.244 | ||
| Pfam | 260 | 317 | 58 | 3.1E-10 | ||
| SMART | 281 | 304 | 24 | 0.0064 | ||
| SMART | 281 | 300 | 20 | 0.011 | – | |
| ProSiteProfiles | 283 | 304 | 22 | 7.412 | ||
| SMART | 304 | 323 | 20 | 53.0 | – | |
| SMART | 305 | 327 | 23 | 43.0 | ||
| ProSiteProfiles | 306 | 327 | 22 | 5.941 | ||
| Gene3D | 325 | 451 | 127 | 7.8E-31 | ||
| SMART | 328 | 347 | 20 | 83.0 | – | |
| SMART | 328 | 351 | 24 | 0.16 | ||
| ProSiteProfiles | 330 | 351 | 22 | 6.649 | ||
| SMART | 351 | 370 | 20 | 320.0 | – | |
| ProSiteProfiles | 353 | 375 | 23 | 5.402 | ||
| SMART | 374 | 398 | 25 | 17.0 | ||
| SMART | 374 | 395 | 22 | 99.0 | – | |
| ProSiteProfiles | 376 | 396 | 21 | 6.58 | ||
| Pfam | 376 | 435 | 60 | 1.3E-10 | ||
| PRINTS | 399 | 412 | 14 | 8.9E-6 | – | |
| SMART | 399 | 422 | 24 | 8.0E-5 | ||
| SMART | 399 | 418 | 20 | 15.0 | – | |
| ProSiteProfiles | 401 | 422 | 22 | 8.266 | ||
| ProSiteProfiles | 424 | 444 | 21 | 5.687 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0196900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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