Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi1g1v0197100 |
Transcript ID | LotjaGi1g1v0197100.5 |
Related isoforms 5 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Kinase family protein; TAIR: AT5G50180.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q2MHE4|HT1_ARATH Serine/threonine-protein kinase HT1; TrEMBL-Plants: tr|I1KCB5|I1KCB5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0197100 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:39869098..39872723) extracted from Lotus japonicus Gifu genome v1.2.
TTCTCTGATCTGAATTATAAATTTTTATTTTCTTGTTTAATCTTGTTGATAATGCCATTCCTATTATTAGTTTTTTTGCT GGGTTTGTTTCAGATATAAAAACCAGACTGTTGCTATTAAAATTGTACAGAAAGGAGAAACTGCAGAAGACATCGTCAAG AGAGAAGGGCGCTTTGCAAGGGAGGTGGCTATGTTGTCAAGAGTGCAACATAAGAACTTGGTGAAGGTGGGAATTTGGTT TAGGATCTCGCTGATTCTTTCCCCTTGTGTCTGCTGTATGTTATTGAAGCAAAAAATAGATACTTCATATAACAAGGACT ACTTGTTAGTTAGTTATATGCCCAGTTTCCAACAGCTGACAGTAAATATTGTCACTCTATTTCTCAACAGTTTATTGGTG CCTGCAAGGAGCCAGTAATGGTGATAGTGACTGAGTTGTTATTAGGAGGAACGTTGCGTAAGTATTTACTAAACATGCGC CCCAAATGCTTGGATACACATGTTGCCATTGGTTTTGCGCTTGATATTGCACGTGCTATGGAATGCCTACATTCTCATGG GATCATACACCGTGATCTTAAGCCGGGTAATAATTTGCTTTGCTTTCCAAATGAATAACTGATTTTTAGGTCAGATCCAG TAAATGTAGGCTTGTATTCTCTGTATTTCATGTTGATGTTGCATAGCTGAGAAATCATAAGTGGTATAGCAGCAGTGTTC TACGACATGATTTCTGTAGTATCTGCTCTCTGACTTCCCTTCAAAATGAATTTCATACCCAAATTGCTATTCATTTTATA CTAAATTGACGTTGCCCAAATACGAATCTATATATTTCTTTTCTTCTTTTATTTGTAGTTGCATTTACAGATTACATTAT CTCCCATTGTTAGAATTCAGGTGCGAAAATATATGACATTGTGGTTTCAAGTTACTCCCTCCGTTCCAAAACTATTGTAG TTTAAGGTTGTGCACAAAGTTTAGGAGTTTATTAATTGATGTTATAATTTGACTAAAACACCCTTATTTAATTAGTTATG TGAAAGAGAGAGAATGAAAATCATTGCTCAACTAATTGGTGAGAATTGTGATCGGTGGAAATAAAAGGTGGTACATGGGA GATACAATAGTAAATGAGGGCATGAATGGAAGAGAATGAGATAAAGTGCTTTGGATATGTAAAACAACAATGATTTTGGA ACAAAACAAAAAAACTAAAACTACAATAGTTTTGGAACGGAGGGAGTACTATCTTTCCGAACATGGTTGTCACTTGTCAC TTGTCACACATGGTTGTCATTCCTATTTATTTGCTCTAAGAGAGATGAAAAAGTTTGTTCCTAATTATTATTTTCTCAAT CATATCCTTATGTCCACCTAGTAATTTTCAGGTATAGTTAAGTTTTATTGTTAAGCCTATGCTTGTATGTAACTTTCTAT TTCCGGTCCGCCTATGCTTGCATGGCCAGTCCAAGTCCGGGTGAAGGAAGAGGATTGTGTTAGGCCTCGGAAGGCAACTT AAAACTAGTCAATATCTTCAAGATGGATCAAACACTACAGTAAAGTCCCATTGTTGAGTAATCCAAAGGTCAAAGGGTAA AATAGAAAGTTCAGAAATAATTTTAACAAATTAATTGTATTTCTTAGTCTGCGTAGTTTCTTCTCTCTCTGAACAGATAA ATAGGAACAGAAGTAGTACTTGTGTGTATCTTAGTTCAAGTAAGCCTGAAACAACTTTGAAGACTAGTACTTCTTGTATG TTGATTATTGGCACTGAATTGATAAGTTGTTATCTACATTAGCAAATAGATTTACAATCTTCATTGAGACAAGAAGTAAG TTTTTTTTTTTTTTTTTCTTTTTAAATAGTGCAATATATGATGATGACTGCCAGGATTTGTTCTATTCTGTTCTTGTCAT ACAATAATATCATGTCTGTCTAAAAAAGTGTTATCCTTATTTTTCATCCTCCTCCTTCCTCCAACTCTGTCCTATCTGCT ACGATTGAGATCATATAATTAAAAAAATTATACTTCAAAGAACAAGCTTTTATTGTTGCTTCCCTTCTGAACTCTCTCTC TCTGTTTTTTCAAGTTGCTGTTGATTAATATGTAAAACTGGATCCAAGTGCTCCACTGACCACTAACTTCACTTACTCTT TGATCCTTGATAATATACCTCATTATTTCCTTTGTAAGGAGTTGGACAAGTGACCATTTATGCACAATTGATCTTGGGAA AAGTTACATATGGTAGCACAGGTCATATAATTTTTGTTAAACACTAATTAACTGCCATGGCAATAAAAAATGAGTATTTT ATTCATGATCTGATATTAGTTGTTCAGTGCTGAAGCTTCCATCCCTCAAATTTATAACTTCCCCTAGTGTAAAACATGTG CATAATGGATATGAAGATTATTCTCTTCTCCTTTGTACAGATAACTTGTTATTGACTGAAGACCAGAAAACAGTCAAGCT AGCAGATTTTGGTTTAGCAAGAGAAGAGTCCTTAACTGAGATGATGACTGCCGAAACAGGAACTTACCGTTGGATGGCTC CGGAGGTATGATGACGAACAGATATGCTTTCAGTGTCTTGTCAATTTTTTGAGCATGTGGACTGACTGCATTGACAAAAA ATTGCAGTTGTATAGTACTGTCACACTGAGGCAGGGGGAGAAGAAGCATTACAACCATAAAGTCGATGCTTATAGTTTCG CAATCGTGTTTTGGGAGCTCTTACACAACAAAGTTCCTTTTGAAGGCATGTCAAACCTACAGGCAGCATATGCTGCAGCC TTTAAGGTAAAAAGATGAGTTAAATATGTTTTAGGTCCCTGTAAATTAAGTGAGATTTTCTGTTTTAGTCCCTTGCTGGA GTAAAGTTGCAAAAACACCACTACAATTAGAGAAATAGCCTAGTTTTAGTCATGGCCTGAGCCGGAGCTCTGGCAACCTT ACCGTGTGTGCGGTCAGGCGTTATGTGACACACCACTTGGAATGCCACATCTTAAAAAATAATTCCACATGGCGTGCCAC ATCAGGCATACACATGGCAATGTCGTCGGAACTCCAACACAGGCGATGATACAAACTAGACTATTTCTCTAATCGTAGGG GTGTTTTTGCAACTTTACTCTGACGAGAAACTAAAACCAAATTTCTCTCTCTTGGTACCTGGACCAAAAACTTATTTAAC CCTAAAAGGATCATGCCTATTTCCTATATGCTGTCATCTAAATGTGTTTGATTAATCTATCTTCTAATGTTACATATAGC TGATAGCTTGAAGTGCTTTCTTTTGTTTCAGAGTGTAAGGCCAAGTGCAGAGAATCTTCCTGAGGAATTGGCTGTAATTC TTACTTCATGCTGGCAAGAGGACCCAAATGCCAGACCCAACTTCACTCGGATAATCCAAATGCTCCTAAACTATCTTTAC ACTGTTTCACCTCCTGAACCTGTGATTCCTTCAAGAATATTCACCCCTGAGAACACAGTCTTTCCGCCAGAGTCCCCTGG TACTAGGTCCTTAATGGCCAAACGTGATGACACAGGCGACACACCCAGAGCAAAGGATGAAATCAAGTCTAATGGTTTTC TTTGCTGCTTCAGCCAGTGTTATTAA
CDS sequence (LotjaGi1g1v0197100.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGTCAAGAGTGCAACATAAGAACTTGGTGAAGTTTATTGGTGCCTGCAAGGAGCCAGTAATGGTGATAGTGACTGA GTTGTTATTAGGAGGAACGTTGCGTAAGTATTTACTAAACATGCGCCCCAAATGCTTGGATACACATGTTGCCATTGGTT TTGCGCTTGATATTGCACGTGCTATGGAATGCCTACATTCTCATGGGATCATACACCGTGATCTTAAGCCGGATAACTTG TTATTGACTGAAGACCAGAAAACAGTCAAGCTAGCAGATTTTGGTTTAGCAAGAGAAGAGTCCTTAACTGAGATGATGAC TGCCGAAACAGGAACTTACCGTTGGATGGCTCCGGAGTTGTATAGTACTGTCACACTGAGGCAGGGGGAGAAGAAGCATT ACAACCATAAAGTCGATGCTTATAGTTTCGCAATCGTGTTTTGGGAGCTCTTACACAACAAAGTTCCTTTTGAAGGCATG TCAAACCTACAGGCAGCATATGCTGCAGCCTTTAAGAGTGTAAGGCCAAGTGCAGAGAATCTTCCTGAGGAATTGGCTGT AATTCTTACTTCATGCTGGCAAGAGGACCCAAATGCCAGACCCAACTTCACTCGGATAATCCAAATGCTCCTAAACTATC TTTACACTGTTTCACCTCCTGAACCTGTGATTCCTTCAAGAATATTCACCCCTGAGAACACAGTCTTTCCGCCAGAGTCC CCTGGTACTAGGTCCTTAATGGCCAAACGTGATGACACAGGCGACACACCCAGAGCAAAGGATGAAATCAAGTCTAATGG TTTTCTTTGCTGCTTCAGCCAGTGTTATTAA
Protein sequence (LotjaGi1g1v0197100.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLSRVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLNMRPKCLDTHVAIGFALDIARAMECLHSHGIIHRDLKPDNL LLTEDQKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVFWELLHNKVPFEGM SNLQAAYAAAFKSVRPSAENLPEELAVILTSCWQEDPNARPNFTRIIQMLLNYLYTVSPPEPVIPSRIFTPENTVFPPES PGTRSLMAKRDDTGDTPRAKDEIKSNGFLCCFSQCY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 276 | 276 | 8.2E-166 | – | |
Pfam | 1 | 210 | 210 | 8.6E-48 | ||
ProSiteProfiles | 1 | 214 | 214 | 36.555 | ||
SMART | 1 | 214 | 214 | 2.3E-28 | ||
PANTHER | 1 | 276 | 276 | 8.2E-166 | – | |
SUPERFAMILY | 1 | 240 | 240 | 1.48E-62 | ||
CDD | 1 | 210 | 210 | 1.72433E-91 | – | |
Gene3D | 1 | 219 | 219 | 1.8E-61 | – | |
PRINTS | 26 | 39 | 14 | 2.5E-10 | ||
PRINTS | 64 | 82 | 19 | 2.5E-10 | ||
ProSitePatterns | 70 | 82 | 13 | - | ||
PRINTS | 138 | 160 | 23 | 2.5E-10 | ||
PRINTS | 181 | 203 | 23 | 2.5E-10 | ||
MobiDBLite | 234 | 259 | 26 | - | – | |
MobiDBLite | 245 | 259 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0197100.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…