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LotjaGi1g1v0197100.6

Overview

Field Value
Gene ID LotjaGi1g1v0197100
Transcript ID LotjaGi1g1v0197100.6
Related isoforms 5
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT5G50180.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q2MHE4|HT1_ARATH Serine/threonine-protein kinase HT1; TrEMBL-Plants: tr|I1KCB5|I1KCB5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0197100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:39869515..39872723) extracted from Lotus japonicus Gifu genome v1.2.

ATGGTGATAGTGACTGAGTTGTTATTAGGAGGAACGTTGCGTAAGTATTTACTAAACATGCGCCCCAAATGCTTGGATAC ACATGTTGCCATTGGTTTTGCGCTTGATATTGCACGTGCTATGGAATGCCTACATTCTCATGGGATCATACACCGTGATC TTAAGCCGGGTAATAATTTGCTTTGCTTTCCAAATGAATAACTGATTTTTAGGTCAGATCCAGTAAATGTAGGCTTGTAT TCTCTGTATTTCATGTTGATGTTGCATAGCTGAGAAATCATAAGTGGTATAGCAGCAGTGTTCTACGACATGATTTCTGT AGTATCTGCTCTCTGACTTCCCTTCAAAATGAATTTCATACCCAAATTGCTATTCATTTTATACTAAATTGACGTTGCCC AAATACGAATCTATATATTTCTTTTCTTCTTTTATTTGTAGTTGCATTTACAGATTACATTATCTCCCATTGTTAGAATT CAGGTGCGAAAATATATGACATTGTGGTTTCAAGTTACTCCCTCCGTTCCAAAACTATTGTAGTTTAAGGTTGTGCACAA AGTTTAGGAGTTTATTAATTGATGTTATAATTTGACTAAAACACCCTTATTTAATTAGTTATGTGAAAGAGAGAGAATGA AAATCATTGCTCAACTAATTGGTGAGAATTGTGATCGGTGGAAATAAAAGGTGGTACATGGGAGATACAATAGTAAATGA GGGCATGAATGGAAGAGAATGAGATAAAGTGCTTTGGATATGTAAAACAACAATGATTTTGGAACAAAACAAAAAAACTA AAACTACAATAGTTTTGGAACGGAGGGAGTACTATCTTTCCGAACATGGTTGTCACTTGTCACTTGTCACACATGGTTGT CATTCCTATTTATTTGCTCTAAGAGAGATGAAAAAGTTTGTTCCTAATTATTATTTTCTCAATCATATCCTTATGTCCAC CTAGTAATTTTCAGGTATAGTTAAGTTTTATTGTTAAGCCTATGCTTGTATGTAACTTTCTATTTCCGGTCCGCCTATGC TTGCATGGCCAGTCCAAGTCCGGGTGAAGGAAGAGGATTGTGTTAGGCCTCGGAAGGCAACTTAAAACTAGTCAATATCT TCAAGATGGATCAAACACTACAGTAAAGTCCCATTGTTGAGTAATCCAAAGGTCAAAGGGTAAAATAGAAAGTTCAGAAA TAATTTTAACAAATTAATTGTATTTCTTAGTCTGCGTAGTTTCTTCTCTCTCTGAACAGATAAATAGGAACAGAAGTAGT ACTTGTGTGTATCTTAGTTCAAGTAAGCCTGAAACAACTTTGAAGACTAGTACTTCTTGTATGTTGATTATTGGCACTGA ATTGATAAGTTGTTATCTACATTAGCAAATAGATTTACAATCTTCATTGAGACAAGAAGTAAGTTTTTTTTTTTTTTTTT CTTTTTAAATAGTGCAATATATGATGATGACTGCCAGGATTTGTTCTATTCTGTTCTTGTCATACAATAATATCATGTCT GTCTAAAAAAGTGTTATCCTTATTTTTCATCCTCCTCCTTCCTCCAACTCTGTCCTATCTGCTACGATTGAGATCATATA ATTAAAAAAATTATACTTCAAAGAACAAGCTTTTATTGTTGCTTCCCTTCTGAACTCTCTCTCTCTGTTTTTTCAAGTTG CTGTTGATTAATATGTAAAACTGGATCCAAGTGCTCCACTGACCACTAACTTCACTTACTCTTTGATCCTTGATAATATA CCTCATTATTTCCTTTGTAAGGAGTTGGACAAGTGACCATTTATGCACAATTGATCTTGGGAAAAGTTACATATGGTAGC ACAGGTCATATAATTTTTGTTAAACACTAATTAACTGCCATGGCAATAAAAAATGAGTATTTTATTCATGATCTGATATT AGTTGTTCAGTGCTGAAGCTTCCATCCCTCAAATTTATAACTTCCCCTAGTGTAAAACATGTGCATAATGGATATGAAGA TTATTCTCTTCTCCTTTGTACAGATAACTTGTTATTGACTGAAGACCAGAAAACAGTCAAGCTAGCAGATTTTGGTTTAG CAAGAGAAGAGTCCTTAACTGAGATGATGACTGCCGAAACAGGAACTTACCGTTGGATGGCTCCGGAGGTATGATGACGA ACAGATATGCTTTCAGTGTCTTGTCAATTTTTTGAGCATGTGGACTGACTGCATTGACAAAAAATTGCAGTTGTATAGTA CTGTCACACTGAGGCAGGGGGAGAAGAAGCATTACAACCATAAAGTCGATGCTTATAGTTTCGCAATCGTGTTTTGGGAG CTCTTACACAACAAAGTTCCTTTTGAAGGCATGTCAAACCTACAGGCAGCATATGCTGCAGCCTTTAAGGTAAAAAGATG AGTTAAATATGTTTTAGGTCCCTGTAAATTAAGTGAGATTTTCTGTTTTAGTCCCTTGCTGGAGTAAAGTTGCAAAAACA CCACTACAATTAGAGAAATAGCCTAGTTTTAGTCATGGCCTGAGCCGGAGCTCTGGCAACCTTACCGTGTGTGCGGTCAG GCGTTATGTGACACACCACTTGGAATGCCACATCTTAAAAAATAATTCCACATGGCGTGCCACATCAGGCATACACATGG CAATGTCGTCGGAACTCCAACACAGGCGATGATACAAACTAGACTATTTCTCTAATCGTAGGGGTGTTTTTGCAACTTTA CTCTGACGAGAAACTAAAACCAAATTTCTCTCTCTTGGTACCTGGACCAAAAACTTATTTAACCCTAAAAGGATCATGCC TATTTCCTATATGCTGTCATCTAAATGTGTTTGATTAATCTATCTTCTAATGTTACATATAGCTGATAGCTTGAAGTGCT TTCTTTTGTTTCAGAGTGTAAGGCCAAGTGCAGAGAATCTTCCTGAGGAATTGGCTGTAATTCTTACTTCATGCTGGCAA GAGGACCCAAATGCCAGACCCAACTTCACTCGGATAATCCAAATGCTCCTAAACTATCTTTACACTGTTTCACCTCCTGA ACCTGTGATTCCTTCAAGAATATTCACCCCTGAGAACACAGTCTTTCCGCCAGAGTCCCCTGGTACTAGGTCCTTAATGG CCAAACGTGATGACACAGGCGACACACCCAGAGCAAAGGATGAAATCAAGTCTAATGGTTTTCTTTGCTGCTTCAGCCAG TGTTATTAA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0197100.6) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTGATAGTGACTGAGTTGTTATTAGGAGGAACGTTGCGTAAGTATTTACTAAACATGCGCCCCAAATGCTTGGATAC ACATGTTGCCATTGGTTTTGCGCTTGATATTGCACGTGCTATGGAATGCCTACATTCTCATGGGATCATACACCGTGATC TTAAGCCGGATAACTTGTTATTGACTGAAGACCAGAAAACAGTCAAGCTAGCAGATTTTGGTTTAGCAAGAGAAGAGTCC TTAACTGAGATGATGACTGCCGAAACAGGAACTTACCGTTGGATGGCTCCGGAGTTGTATAGTACTGTCACACTGAGGCA GGGGGAGAAGAAGCATTACAACCATAAAGTCGATGCTTATAGTTTCGCAATCGTGTTTTGGGAGCTCTTACACAACAAAG TTCCTTTTGAAGGCATGTCAAACCTACAGGCAGCATATGCTGCAGCCTTTAAGAGTGTAAGGCCAAGTGCAGAGAATCTT CCTGAGGAATTGGCTGTAATTCTTACTTCATGCTGGCAAGAGGACCCAAATGCCAGACCCAACTTCACTCGGATAATCCA AATGCTCCTAAACTATCTTTACACTGTTTCACCTCCTGAACCTGTGATTCCTTCAAGAATATTCACCCCTGAGAACACAG TCTTTCCGCCAGAGTCCCCTGGTACTAGGTCCTTAATGGCCAAACGTGATGACACAGGCGACACACCCAGAGCAAAGGAT GAAATCAAGTCTAATGGTTTTCTTTGCTGCTTCAGCCAGTGTTATTAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0197100.6) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVIVTELLLGGTLRKYLLNMRPKCLDTHVAIGFALDIARAMECLHSHGIIHRDLKPDNLLLTEDQKTVKLADFGLAREES LTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVFWELLHNKVPFEGMSNLQAAYAAAFKSVRPSAENL PEELAVILTSCWQEDPNARPNFTRIIQMLLNYLYTVSPPEPVIPSRIFTPENTVFPPESPGTRSLMAKRDDTGDTPRAKD EIKSNGFLCCFSQCY
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:1.10.510.10
1 199 199 5.3E-54 –
PANTHER
PTHR23257
1 255 255 2.4E-151 –
PANTHER
PTHR23257:SF806
1 255 255 2.4E-151 –
ProSiteProfiles
PS50011
1 193 193 33.927
IPR000719
SMART
SM00220
1 193 193 3.8E-15
IPR000719
SUPERFAMILY
SSF56112
2 219 218 1.08E-55
IPR011009
Pfam
PF07714
2 189 188 2.0E-41
IPR001245
PRINTS
PR00109
5 18 14 1.9E-10
IPR001245
PRINTS
PR00109
43 61 19 1.9E-10
IPR001245
ProSitePatterns
PS00108
49 61 13 -
IPR008271
PRINTS
PR00109
117 139 23 1.9E-10
IPR001245
PRINTS
PR00109
160 182 23 1.9E-10
IPR001245
MobiDBLite
mobidb-lite
213 238 26 - –
MobiDBLite
mobidb-lite
224 238 15 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0197100.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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