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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0201300 |
| Transcript ID | LotjaGi1g1v0201300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Eukaryotic translation initiation factor 3 subunit I; TAIR: AT3G15610.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q54LT8|STRAP_DICDI Serine-threonine kinase receptor-associated protein; TrEMBL-Plants: tr|A0A151S8K4|A0A151S8K4_CAJCA Serine-threonine kinase receptor-associated protein; Found in the gene: LotjaGi1g1v0201300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:42619433..42626906) extracted from Lotus japonicus Gifu genome v1.2.
TAGAGCTTAGATTCATATTCAAAGATTGTCCAACGGCACTTACAGCAGTGAAACTTACATCAGTGGGACTAAAATCCCAA GCAGTGATTCTGCAATGCATAAACAGATAAGCAATTGAAGACTAATAAGCATGCTCACTCATGCTGATACAAGTAATCAA CTAACAAAGAAAAACCTTACAAGCACCCTAAATCTCAGAAACCAGTGAAAAGTTTGGCTTTCCAAGCAGTAGTAAATCAT TCCTTTTTAAAACAACTGCTTCAACTTGCAATCCATCCGACTCTGCCGGAGATGCAAACACTTTAGCCTTCAAGGAAGCA CACAAACGGCTTCAACTGCACCAAGATGAGTCAAGCCGGTGGCACTGGCACCAAGGGTAGAGGGGAACCTGCAGATCAAC CCAGAAACAACCAGAACAGAGGGAAAAGGGATGGTGGTGGCCGGAGCAGACCAGATCGCGGCTGAGGTACGGCGACGGCG GTGGCTCAGTGGCGCGGTGAGGCTACTAACAAATCAGCACAACTAGAGCCCTCCCCGTTTCAACCCAGGACTTGCCTGAG ACCAGAGAGAAGGCCTCCGGCCCGGGTACAGGGGCGTACACAGCAGCAGCAGTGGCAGCGAGACACAGGACGCACCGTCT CAACACTAGATCTGCAACCCAACTCACTGAGATCGATGGATGCGGTGAGAACGGCCAAGGTGGAGGCGATGGCGGTGAGG GCGGAGGATGTGGTGGCCGTAAAAGAGGGAAACCAGACCATAAACAAAAGGAAACCCACTTATTTGGGTAGTAGATCCAC CTAATGTGGAAGATATCCACCTATTGTGGAAGAAACCCACCTATTGTGGAGGGAAAACACGTAGGAAGCAGGAACGAAAC CTCCCTAATGGAGGAGGAGCCCCCCAAGGGGGAGGAGCCCCCAAGGGGAGAAACGGCGCTGGAGATTCTGTAACCCTAGC AGAGCTTCAGTGTCAAAGTTAAAGCTTGTTTTAATTCGTTTGAGAAACTTGACACAAAGGTGATCATTGATCAATCAACA ATCTTATTGTTGGGCTTCAGCCCATCAATAAATCCCTTTGTGTTTATCCATAACCATAAGTTGATAAAATAGTGGGACCG AATTGAACAAAAAACCAGCCTTGAATAAAAAAAAAAAGACTCGTACGATACGACAGCGTATGAAGAGTTTAGTCCTGTAC GACATTTTCAATTGACGGAAGGGTCCCACTACTGAACAACTGCCGGTATAAAAGAGCAGATCCAGAAGCCATTCATCCCT GCGCCTGGCCCTTCCTCTCCCAGCTCTGTTCTTCTCTTTATTTCTTTTTCATTTTTTTTTATCAATTACCATTTTATCTT AATTTTTTTTGTTAGGTTTCGAGTTTTTCTTCGAAATTTGCTTGTTTTGTTGTTTGTTAATTTTCAGAGCTTGAGGGTTA GGAGGTGTGGATTCAGTTCAAGATAGATAGATATTCAGCGTTTCCCACCTGTGTTTATAATAATACCGCCACTTAGCGTT TTTTGATAATTAATTCCCTATAAAATTGAGTCAACACCATACCATAAAATTGAGAAATGGAAAAGAAAAAGGTAGCGGTT CCTCTTGTTTGCCATGGTCACTCTCGCCCAGTGGTCGATCTCTTTTATAGTCCTGTTACTCCCGATGGATTCTTCCTTAT CAGCGCAAGCAAGGGTACGGTTACGGTACGCGTGGGTTTTGATTTTTTTTATTGGATCTAGATGAAATGTGATTTTGAAT TGTGATGATTTGGGTTGCACAGATTCCAATCCTATGCTCAGGAATGGAGAGACTGGAGACTGGATTGGAACTTTTGAAGG GCACAAAGGCGCAGTCTGGAGTTGCTGCTTGGATGCTAATGCTTTGCGGGCTGCAACTGCTTCTGCTGATTTCTCCTCGT ATGTCATTCATGTTTTATTTCTTCAGTCAATAATATTCGGTCACATTTAGCTTAATTCTATTTTGAACCCTAATCATTGT TTCACTGGTCCATTTGGTTATACATTTTATCAAATTGGATATGCAATGTTTGGTTTTAGATAGTTAAGTCGCCAGAAAAT GGATTAGAGCCTTCCTGCCCTGAAATGTTTGTTGTAAAGCCTTCTACTGTTGCGATTCGATTGTGGCCATTATTTTAGTT TCCTAGTCACAAACCCTGCCATACATCTAGCCTATGGAGCTTCTTTGATCTCGTAATCCCGAGATCAGAGAACCCATTGT TCATCTAGACAGATGTCGAAGTCCCGTAGTTGACCTTCACTCCATTCGCTGCTGTTTTTGTTCAGACCTGAAATGCACGG CCTATTTGCGGTTTCTTCCTCTGTTTTGATTGGCATCACCCCTAGTCCCTTTCACCAGTTATTGCCTCTTTATATCTTTC AAGTAGGAAACTCATCCAAAATGGAAGACACATGACTGCCCATTTCTTTTAGTAATTTACATCACTGCCTTCTTGTTTTC AGTTATTTTCACTACAGACCTTTTTCATTTTGGTATCGAGTTTCATGCTTTCTATTTAGTTTTACCAATGGATTAGAATT TTGTTGTCCCCGTACTTTTAAGTATTTTTGCACTACCTTTAAACAAAATAATTGAGAAATGTCTTAAATTTTGAATTAGA ATATTAAAACTTTGTTTTGTTTATCGCATAAACAATACATTTGGAATCATATTTGATAATTGATTTGATTCATAAATGTT AATTTTCTGTTTGGGAAGTTATAAACTACGAATTGATTTCATTTTGAAATCAGTTTGGATTAGTGTTATGTGCACTTAGA AATTCGCCACTGGATTTGATTTTATTTGTAATCTAAATAAATTATGGTTTTTCTTTTTTAATCTACCCCTTAACTTTTCA AGCAAGTTTGCTAAACTTATTATCCTGCTAGGATTGGAAAGGAGGAGTAAATGTGAGATGGTAAAATGAATCCTAAGATC TTACATATACTCTCACATGCACACAATTTTGTGTGGCCGAGGGTTTCCGGGTCGCTTTTCTATAATTCTGTTAAAGGTCC AAATCTCTCACCCTAAATTGAGCCTCTCACCATGTTCCGAAAACAGACTGTTACGCCCTTTTATCTGTTGACCGCGATGA TCATCTATCTCAAGTCGATGACTATCTCTGCTGGTGCATAGTTGCATCCTCTGTTCTCTCACACCGTCTGTTCTCCTAGC CCTTTGTTTCTCTTCGTCTTCCCACCCTTGGTAGGCTCAATTTTGCAATCTCATCTCTGTCTGTTGCTGGACATCCTAAC ACACCTTTTCAGTCACATATCTCTATTATTTTTAGTGATGGTCCTAACTTATCTTTTTTGTTTTATTTTCGTAATGAAAC ACTAATGGATTTAGATCTTCACTTTATTTTTTATGTTAAGATGTGTTTTATATGATATTTTACGAATCTATGCTATTTTT TATGCCTATGTATAAGTAAACTCTTACATTTTTAATAGAATTTTATTATCTGATATACAATTCTATGATTTACGATCCCC CTTCCCATTCTAGATCAAATCTCCAATTTTGCAACATTGCACATATATCTAATAACATAAATATGAAAAATAAACTTCAA AGCCAAGGTTGAAATTGTATCAACAAAGGTCATATTCAAGGTTGTCAAACTTGATAGTCAATATTAACTTGTGGTGTGTA TAAACTCGGCTATTTAAAAAGCTACCATAATAATAATAATATCATAAATAAATATTTTACGTTCCAACATTCAACTTCAT AATAAAGCAATTTAAAATTAATAGGAATGATTTTTCCTTATTTCAATTGTAGTAATGAGTAATGAATGACCCCCAATATT GGAGGTTAATTACTTCAACTAGTCCCCATGTTCTTGGAATGGATCTTAGTTGTTTCAAGCCAGCAGGGTTGCCCAAAAGC AGTATATAATACTCATAAAACTTACTAGTAAGCCAGATATATAATTTTAGGTAGAGTTTCTGTGTTGAAACGATACATAA ATGAAACTTGACAATAGGTCAAGTACATAAATGGATCTTGAGAACAAACAGAACAAATAGATTGGTTGTATTTGAAATTG CAAAGAACAGAATAGATTTGCCTAAAATAATTTTGCTGTGCAGCTTCAAGGGTCATGACTTGGATTTGCAGAAAAATATT TTTGCCTTCACTAGCCACAACCTTGATTAATTTGGTCATGATTTATAGAAAATGTTTGATCTTGAAACTGGGCTCATGAA AGAATTGCCGAAAGCTTTGATCGGCTAGGTTTTACGGTGACAGTTTGATTGTGAATTTAATGTTTTCCTTGTTGACTCAA CATGAGAGTCTAATTTGTGAGATTGATGAGTCCTCTCAATTCTACCAAGGAAATATTTTTTGTGCAACTAAACTTAAATA TTCTTCCTAGAATTGTAAGCTCGTAAGATTCGACAATTTGACCCCAGATGCACCAAAGTTGCTAAGTCGTACCTGTGTCC GGAACCAATACTTATGTGTATAATACTCCTAGTTATCTATGCCAGAAATATCCTTCCAAGTTTTTTTGAAAGAAATTGTG TCATTCTTTTGCGATACTCCTTTGGTACATTTCAGATACAACAACTCGCCTTAAAGCTTAATGTAGACTTCTGGTTCATC ATTTTGTGATAGGAAATAAAGTACATAATTTGTATTTGTTCTTTTAAGAGAAACAAATTGGATCCTAAAAGGGCAAATGA TTTAACTTTGTGCATTCTAACCTTTGACTTTTGTCTATGAAAGATAAAGGATTCTAATTGAGAGACAAGGTTGCAGGATA TATACGGTCGTGGATTTCTTGAATTGCAGCATTGTCTAAAGAGCTAGACTTAGAAGCTATGATATGCAATCAAAAGAGCC AATACTTGTTTAAGTAGGACTAATGATGCTATGTGACATTCTAGCATTGGTAGGGAAATGATATGTAATTTTTATGGCAT GTTTATCAAGGAACAAATATATTTTGATGGGGACAAGATGTGTCTATCACTTTGAGAATGTTCACTCTAATAAAATCAAA TTGAATAAAACCAATTCTGTATTTTAATGATATGAACAAGTTAGGATTATGGTGTTTTACATATTTTAAGCAATGCTGAT AAACCTACCATTTTTGCTGCAATCATCGCTTGGCAGTCTGCAATACCTCTATCCACCTTTCTGAATGGGTGTTTCGCTTC AAATTTTTCCATTAACTGCTTTTGTGCTAGTCTTTTAGTAGTATAAGAGAGTCAGTATCTTCTTATTTGCAGTGAATGTT TTAGACTAAGCAATAAACGAAGTTCATTCTCTATTAATGTAATTGCAGTTCTTTGGTCAAAAGCTGACACATCATCATTT TGGTTGCAGCAAAGTTTGGGATGCATTAACGGGTGATGAGTTACATTCTTTTGAACATAAGCACATTGTTAGAGCATGTG CTTTTTCTGAGGTACAATTTACACTGATATGTTTCTGTTTGTTTTAAATTTCAAATACCATGACTATGCTACAGTTGTTA TGTTTTGGATAAGGACCTATTTTGATGATGACCTCTTATAAGTTCTCTTTACACTCCTACTTTGTCATTTCAACTCTCTC CGTAGACTTTTAATTCCGAACAGATATTAAGATAATTGATATAATCTTATGTAGATTTTGTTGAAATTTGGATTCTTCAT TGATGTTTATTTTTTATCTGGGGCTTGCATACTTTGTTCATATGCATTGATATTTATATACTTGGTAGCAGGATACGCAC CTTTTGCTCACTGGGGGAGCTGAGAAAATTCTCCGAATTTATGATTTGAATCGTCCTGATGCAGCACCCAGAGAAGTGGA TAAATCCCCTGGTTCTGTCAGGACTGTTGCATGGCTTCATAGTGACCAGACAATATTAAGTTCTTGTACTGATATGGGAG GTGTCAGGTATGTCTCATTCAGCCATTAGATGCTGACTTGTCTGGGGTTGTAGTTTTGCATGTGTAAGGTTGATTATTTT TTATTCGTAATCTTTGGTTTTAACCCCAAACTGTGATGATATATTGTACTGAATCTAGTAGTTAATTCACAGGCTATGGG ATGTCAGAACTGGTAAAATAGTGCAGACACTTGATACCCAAGCATCTATGACTAGTGCTGAAGTGAGTCAGGATGGTCGT TATATTACAACTGCTGATGGTTCTACTGTTAAGTTTTGGGATGCAAACCAGTATGTAACTATAGACCTAGCCAGCCAATT TCATTTTTTAAGATCATTCCTTTTAGGTTCATAGGGTTACCTGTATTTTTCAGCTATGGATTGGTGAAGAGCTATGATAT GCCCTGCACTGTGGAATCTGCTTCATTGGAGCCCAAGTATGGGAACAAGTTCATTGCTGGAGGAGAAGACATGTGGATCC ATGTTTTTGATTTCCATACTGGCAATGAGATTGGTAAGCTATTGATCAGTTAGTCACATCTAATTGAAAATACTTGATTA GCTTAAACATATGTTCAGTTCCTAAAACTAAGATATATTATTCTAGTCCGTATTTTCTCTGTTTTTATCCCTACATTAAC AAAATAGTGTGCTTTCACGCCCTCACTGGGTACTTTTTAAAAGGACTAAAAACGCATGATTTTCATATCTTTAAGGACTA AAACAAAATCAAAGAGTGTGTAATCTGAAAAAAGTATCATAATTTTCGGGATCAAAAGCATTTATGAGCCTGCTGGTTGC TTGAAGATATTTATGCATTGATTAATTTTACAGTTTTGATTTTTCATATCTTTTAATAACTAAATTGATTTTTATAGCTT GTTTGTTTGTGTTCCAAAACCCATAACCTATTATCGAGTTTGCAAAAGCTACATATTGTTGCTTTGACTAGGTGTGGATC TGAGAGATAACGTTTCTCACCCAAACTTTTTTTCAAACATATACTTAGTTTTTGTTTTGATTTGTTGTGCAGCATGCAAC AAGGGCCATCATGGTCCTGTACACTGTGTCCGTTTCTCCCCTGGAGGAGAATCATATGCATCAGGATCTGAGGATGGAAC CATCAGAATATGGCAGACAGGTCCATTGACTCATGATGATGAATCAGAGGTTTTATCCCCCGAAAAAGTGAAGGTAACCG CGGATGAGGTTTCAAGCAAGATTGAGGATTTTCATATTGCAGAGGAGGCTAAGTCCAAAGAAAAGGAAGAGGTTGGGGAG GAATTATAGTACTGATAATTATGCCCATTTTGCTTGGCAGAGTCATAGACTTTTAGCATATTACCTGAACCAAGGGCCTT ATATATGATTATTATAAACTGAATTTTGTAAATTTTAGTTTGTATTCGACGTATACTGAATTGTTGAGCTGGTTAAAGAT AGTTTTATTGAGTTTTATGGTGAGTAACGATATATACACATCTCATTTTTGAAACATTTTATTTCCACATCTTTTTATTT CTATCTCTCTCCTCTTATTATTTATCACATCTAA
CDS sequence (LotjaGi1g1v0201300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAAGAAAAAGGTAGCGGTTCCTCTTGTTTGCCATGGTCACTCTCGCCCAGTGGTCGATCTCTTTTATAGTCCTGT TACTCCCGATGGATTCTTCCTTATCAGCGCAAGCAAGGATTCCAATCCTATGCTCAGGAATGGAGAGACTGGAGACTGGA TTGGAACTTTTGAAGGGCACAAAGGCGCAGTCTGGAGTTGCTGCTTGGATGCTAATGCTTTGCGGGCTGCAACTGCTTCT GCTGATTTCTCCTCCAAAGTTTGGGATGCATTAACGGGTGATGAGTTACATTCTTTTGAACATAAGCACATTGTTAGAGC ATGTGCTTTTTCTGAGGATACGCACCTTTTGCTCACTGGGGGAGCTGAGAAAATTCTCCGAATTTATGATTTGAATCGTC CTGATGCAGCACCCAGAGAAGTGGATAAATCCCCTGGTTCTGTCAGGACTGTTGCATGGCTTCATAGTGACCAGACAATA TTAAGTTCTTGTACTGATATGGGAGGTGTCAGGCTATGGGATGTCAGAACTGGTAAAATAGTGCAGACACTTGATACCCA AGCATCTATGACTAGTGCTGAAGTGAGTCAGGATGGTCGTTATATTACAACTGCTGATGGTTCTACTGTTAAGTTTTGGG ATGCAAACCACTATGGATTGGTGAAGAGCTATGATATGCCCTGCACTGTGGAATCTGCTTCATTGGAGCCCAAGTATGGG AACAAGTTCATTGCTGGAGGAGAAGACATGTGGATCCATGTTTTTGATTTCCATACTGGCAATGAGATTGCATGCAACAA GGGCCATCATGGTCCTGTACACTGTGTCCGTTTCTCCCCTGGAGGAGAATCATATGCATCAGGATCTGAGGATGGAACCA TCAGAATATGGCAGACAGGTCCATTGACTCATGATGATGAATCAGAGGTTTTATCCCCCGAAAAAGTGAAGGTAACCGCG GATGAGGTTTCAAGCAAGATTGAGGATTTTCATATTGCAGAGGAGGCTAAGTCCAAAGAAAAGGAAGAGGTTGGGGAGGA ATTATAG
Protein sequence (LotjaGi1g1v0201300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEKKKVAVPLVCHGHSRPVVDLFYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCCLDANALRAATAS ADFSSKVWDALTGDELHSFEHKHIVRACAFSEDTHLLLTGGAEKILRIYDLNRPDAAPREVDKSPGSVRTVAWLHSDQTI LSSCTDMGGVRLWDVRTGKIVQTLDTQASMTSAEVSQDGRYITTADGSTVKFWDANHYGLVKSYDMPCTVESASLEPKYG NKFIAGGEDMWIHVFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPLTHDDESEVLSPEKVKVTA DEVSSKIEDFHIAEEAKSKEKEEVGEEL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 342 | 342 | 8.1E-221 | – | |
| PANTHER | 1 | 342 | 342 | 8.1E-221 | – | |
| SUPERFAMILY | 5 | 301 | 297 | 8.7E-65 | ||
| SMART | 5 | 47 | 43 | 43.0 | ||
| Gene3D | 9 | 324 | 316 | 5.3E-74 | ||
| ProSiteProfiles | 12 | 307 | 296 | 28.555 | ||
| CDD | 14 | 298 | 285 | 2.13756E-46 | – | |
| SMART | 50 | 89 | 40 | 5.1E-5 | ||
| Pfam | 54 | 89 | 36 | 0.012 | ||
| ProSiteProfiles | 57 | 98 | 42 | 10.475 | ||
| ProSitePatterns | 76 | 90 | 15 | - | ||
| SMART | 92 | 130 | 39 | 1.5E-5 | ||
| Pfam | 94 | 130 | 37 | 0.0023 | ||
| ProSiteProfiles | 98 | 139 | 42 | 9.005 | ||
| SMART | 134 | 174 | 41 | 1.9 | ||
| SMART | 177 | 214 | 38 | 0.26 | ||
| SMART | 217 | 256 | 40 | 70.0 | ||
| SMART | 259 | 298 | 40 | 2.1E-9 | ||
| Pfam | 265 | 297 | 33 | 9.0E-8 | ||
| ProSiteProfiles | 266 | 298 | 33 | 14.519 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0201300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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