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LotjaGi1g1v0214400.6

Overview

Field Value
Gene ID LotjaGi1g1v0214400
Transcript ID LotjaGi1g1v0214400.6
Related isoforms 6
Lotus japonicus genome version Gifu v1.2
Description Plasma membrane ATPase; TAIR: AT5G62670.1 H -ATPase 11; Swiss-Prot: sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type; TrEMBL-Plants: tr|A0A151S7C9|A0A151S7C9_CAJCA Plasma membrane ATPase; Found in the gene: LotjaGi1g1v0214400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:47281617..47288146) extracted from Lotus japonicus Gifu genome v1.2.

ACCAGATCTGAATGTTTGTTTCTTTGTTTTGTTCTTCTTTGCTGTGGTTTCTTTGTTTCATTGTGTGTGTTTGTGTTTGT GTGTTTGCAGGAGAATATACCTATTGAGGAGGTTTTTGAGAATCTGAGATGTAGCAAAGAAGGTCTCACCAATGCGGCTG CTGAAGAGAGGTTGCTCATTTTCGGCCACAACAAGCTCGAGGAGAAGAGGGTTAATTAATTCACACTTAATTCACTCTTG TTTCGGCCGCGTGGATTTCGCGGTGAATTATAATATCTTTTTGGTGTTTTTTTTTCAGGAGAGCAAGTTTTTAAAGTTCT TAGGGTTTATGTGGAATCCTTTGTCTTGGGTCATGGAGGCTGCTGCTATAATGGCAATTGCTCTTGCCAATGGAGGAGTA AGTGGAGTGGACTACACTCAGCTTATTTGGGAGTGTTCTTAATTAATGACTGTAATTTTTACTGATGAGATGATTTTTAT GCAGGGCAAGCCGCCGGATTGGCAGGATTTTGTGGGGATCATCACCTTGCTTGTCATCAATTCAACTATTAGTTTCATTG AGGAGAACAATGCGGGTAATGCTGCAGCAGCTCTCATGGCTCGTCTTGCTCCGCAAGCAAAGGTGTCAAATTTTGATTCT TTCAGTTTGATAAAGTGTGCATTTTTTTTATATTGGTGCTTTAAAATCTTTGCTCTGGAAAGGATTCAACTTTTATTTTT GTTTTCGTCTCATATTTTCATTTGTAATTTCTGTGTTGTGAAGGTTCTTCGAGATGGTAGGTGGAGTGAGCTAGATGCGG CGGTCCTAGTACCTGGTGATATAATCAGCATTAAGCTTGGTGATATTGTACCAGCTGATGCTCGACTTCTTGAAGGGGAT CCTTTGAAAATTGATCAGGTGTCTATTGTTTTATCCCTTACGTGCTAAATGGTTCAATTACACCCTGTTTTAACCTATGC CATGTACCTTTCAGTCTGCACTTACAGGTGAGTCTTTGCCAGTGACAAAGGGCCCTGGAGATGGTGTGTATTCTGGTTCT ACCTGCAAACAAGGAGAGATTGAAGCTGTGGTCATTGCAACCGGTGTTCATACCTTTTTTGGGAAAGCCGCTCACCTTGT AGATACCACTAATCAAGTTGGTCACTTTCAAAAGGTATCACGAAGGCAGACACAATTTTTCTGGCATTATAAAATTTTGT TCAGGTGTTATATTTTCTGCTGTTGTTTAGGTCTTGACTGCAATTGGGAATTTCTGCATATGTTCAATTGCTGTGGGGAT GATTATTGAGATTATTGTTATGTACCCCATCCAAGATCGAGAGTACCGTCCTGGAATTGATAACCTTCTTGTACTTCTTA TTGGGGGGATTCCAATTGCCATGCCCACTGTTCTCTCGGTGACCATGGCCATTGGTTCTCACAGGCTATCTCAGCAGGTT GGTTAGGTCCCTTCAATCGAGTATGTTTGGTAAAAATGGTTAAGAATTAATGGTTAATTGGATATACTGTTTGCAGGGAG CTATCACAAAGAGGATGACAGCTATTGAAGAGATGGCAGGAATGGATGTGCTTTGCAGTGATAAGACTGGGACTCTAACA TTAAATAAGCTAACTGTTGACAAAAATCTTATTGAGGTCAGGCGATGAATGGTTTTACTAGTTGTTATAAGATCGAGCCT TTTGTAAAATATAATAGTTTTCTGATTATTCTTTTTGACAAATAAGGTCTTCGCAAAAGGAGTGGATCCAGATACTGTTG TTTTGATGGCAGCTCAAGCTTCGAGACTTGAGAATCAAGATGCAATAGATACTGCCATAGTATCGATGCTGGCGGATCCA AAGGAGGTTAGTCAATTATATATCATTCACTGTGATTCTTCCAAAAACTTATATTTCATAGCTGCATGCCTGCAACTCTA ATCCTCACATGCTTACAATATTTGATGTATTTGTATAATAATTTTCTTTCCTGACCAACTGCTATAAAGGCGCGTGTTGG TATCCAAGAAGTACATTTTCTTCCTTTCAATCCTACTGATAAGCGGACAGCATTGACTTATATTGATCGTGATGGTAAGA TGCATAGAGTTAGCAAAGGTGCTCCAGAACAGGTAATTTAGTAACGATTTCCTCTGAAGTTTCTGTTAAAGGTTGGTTTA TTCTCATTCTTTTTTGTACCATTGTTGCTAGATCCTTAATCTTGCACACAATAAGTCAGACATTGAACGTAGAGTTCATG CAGTGATAGACAAATTCGCAGAGCGTGGTTTACGATCCCTTGCAGTGGCATACCAGGTAATTGATTCATTGCACGCTCTC CGGCTTGATCATTTGGCGAATTTGTATACCTACATTTTATGCTAGAAATATTTTTTCTAAGGTTTCTCCAATTTACACAG GAAGTTCCAGAGGGACGAAAAGTGAGCCCCGGAGGTCCATGGCAGTTTATTGGCCTTATGCCTCTGTTTGACCCACCTCG GCATGACAGTGCAGAAACGATACGGAGGGCACTGAACCTTGGAGTGAATGTCAAAATGATTACAGGTCTATTACAATTAC ACATAACAGTGAAAACCCTTGAGTTGCTTTTAGTTTGGCACTAAAATAACTTTACTTATCGGCTTAAATACTCTTTTGGT CCTTAAAATTGTAAAGGGAATCAAATCTGATCCCTGTAAAATTTTCACATCAAATTGGGTCCCTAAAATTGTTTTTTTAA TCTAATTAAATCCTTTTGCTCAATTTTGACTAGTCAACGGTCCAGTGGAAAGCCTAGTCAGCTAAGGATGGCCACATGTA TTTTTTTTCACATCAATTTTAGTCCTTTAAAAAATATTTTAATCAATTTTAGTCCTTGTTCTTCCACCTTCCTCTTCCAC CTTCTTCCTCTTCCTCCATAACTCAAATCCTTAAATCTAGAAATTCAAAACCCTAAAAAAACTATATGTTCATCACATTC ACCTTGTTCTTCCTTTTGAATTTATGGGATTTGAGTTATAGAGGAAGAGGAAGAAGGTGGAAGAGGAAGAAGATGAAGGT GGAAGAGGAAGAAGATGAATGTGGAAGAACAGGGACTAAAATTGATTAAAATACTTTTCAAGGGACTAAAATTGATGTGA AAAAGTCAACGTGGTCGTCTTTAGCTGACTAAGCTTGCCACTGGACCGTTGACCGGTCAAAATTGAGCAAAAGGAGTTAA TTAGATTAAAAAAAATAATTTTTGGGACCCAATTTGATGCGAAAATTTTACAAGGATCAGATTTGATTCCCTTTACAATT TCAAGGACTAAAGTGTTATTTAAGCCTTACTTATCTACCAAAAAAAATAACTTTACTTAAAATCTAGTTAATTTCTAAGC TCAGGAACAAGCAGTTGCATTCAACTGATGCAAGTTTAGTCTTGTCAAATTTGGTAGTCCAGTACTGTTGCTCGTTATTC TGTGATTAAGCAAATATTATTGGCCACATAAACTTCTTGTGCATATTGCTTAAGAGTCATGATTGAAGTTGATTTGATCT GAGTTAAAAGTTAAAAACAAACATTCACTAGTAAATGAAGGGAGACATCTACACAACCAGGTCATCATGAACATCCTGTA GTGAAAGAATTTTTGTGAGGCATGGTATCCACCTGAAACTGGCTTTTCATTTGGATTCAAAGTAATGGATTATTTTCCCA CATTACCTTGAAACTTCTGTTTTACCTCATTAACCCCATATCCTCCCTCTAATTTTTATTTATACATTCTCCTTCAGTCC TTCTTAACTTTCTATTGACTTCTTTTATGCATGTAGAGTAATCAATATGATTTCCAACTTTGCTACATTATGATTTATTT TTCTGACCTTATTGTCTCATATCCTCCTCCTAATTTCATTTACATATCCTCCTTCACCTTATCAGGGGATCAGCTAGCTA TAGGAAAGGAAACAGGCCGTCGTTTGGGAATGGGTACCAATATGTATCCGTCATCTGCATTGCTTGGGCATGATAAGAAT GAATCCATTTCAGCCTTACCGATTGACGAACTCATAGAAAAAGCCGATGGATTTGCTGGTGTCTTTCCTGGTATGTTTTT TATGTTGATCAATTCAATTGATTGTTTTTATTGTTTGACATAACTGGATGAAATATTAGATATCAGTTGGGACTCGGGAT AATTAAGCAGCATATTGTTATTTTTCTCATATTAATTGGTTTATATATTTTGCCAGAGCACAAGTATGAGATTGTCAAGC GTTTACAAGCAAGGAAACATATCTGTGGAATGACTGGTGATGGGGTGAATGATGCGCCTGCACTCAAAAAGGCAGACATT GGGATTGCTGTTGCTGATGCAACTGATGCAGCTAGAAGTGCTTCTGATATTGTTTTAACAGAACCAGGCCTTAGTGTTAT TATTAGTGCTGTGTTGACCAGCCGAGCTATATTCCAGAGAATGAAAAATTATACTGTAAGCGATATCTTCTTAATAGTTT TGTACTTTTTTTTAATGATCCCCCAAATATACGTATCCTGTTATAGTAATCCATCACTATTAATTTTTAGGATTTTTTTT GTTCAGGCCATATGCACTTGAGCTAATACGAGTGCGTATAATGCCATTGTTTGACCCATTTGTTTCGTCTTTCATGCAGA TTTATGCTGTCTCAATTACAATTCGTATTGTTGTAAGTGAATTATATTCCAGCTCTGAAATATACTTTCTACTTTAGGTG TCACCATTCCTTTGATCAGTCTCTTATTCTGTATTTTACATCTTTGACATGCTTGCAGCTTGGTTTCATGTTGCTGGCTC TTATATGGAAGTTTGACTTTCCACCTTTTATGGTGCTTATTATCGCCATTCTAAATGATGGTTTGTTGTTTCTTTTCTCC TACTATAGCATGCCCCTTTCTAGTCCTGAGCTATATTGGGAGCTAATATTGTGATATATATCCATAAATATATATATATA TATATATATATATATATATATAATTGCAGGTACTATTATGACAATTTCTAAGGATCGTGTAAAACCATCACCTCTGCCAG ATAGCTGGAAGCTAGCTGAAATATTTACTACTGGCGTTGTGCTTGGATCTTACTTGGCAGTGATGACTGTCATATTCTTT TGGGCAGCATACAAAACAAATTTCTTCCCGGTATATCTATTGATATTGTTGGTTTCAAAATATTTTCTAGTTTAATTAAA TTTGGTTATACTTATATCAGAGTGTATTGTGTGAATTCTTGTATGCAACTTTATCGCATGTGGTATGTATTCTAGTGTAT GACTGTTATAATTTAAAGTTTCCTAATTATGTGCGTCAATGTCAATTTCTGCCTTACATGGATTCTGTTTGTTGTTTCTA TCTAGTTAAAATGTCTCATTCATTTTTCATGCCTGCTATTTGTGCAGCGGGTATTTGGAGTCTCTAGTCTTGAAAAAACT GCTCATGATGATTTCCGAAAACTAGCCTCTGCAATCTATCTTCAAGTGAGTACTATTAGTCAGGCCCTAATATTCGTGAC TCGGTCTCGAGGTTGGTCATATGTTGAACGTCCTGGTATCTTGCTGATGACAGCTTTTGTGATTGCACAACTGGTAAGCC AAATAACCCTTACTCTGCTGCAACGTTTTTCAGCCATATCAAGGATGACTTTGGTGATTGATATGCTGTTTGCAGATTGC CACTTTGATTGCGGTGTATGCAAGCTGGAGCTTTGCTGCCATTGAAGGCATAGGTTGGGGTTGGGCTGGTGTAATATGGT TATATAACATAATATTCTACATCCCTCTTGACATCATCAAGTTTCTCATTCGATATGCTTTAAGTGGAAGGGCATGGGAG CTTGTCATTGAGCAAAGGGTAAGTAAAGTTTTTTCATTGAGTTTGTTTGGAGGCCAACCAAAGAGCAGTTATTGGAGCTT ATCTAGTGCCTTTTTTTAAGTAAAGATACTCCAAGAAGTGCTCTTTGGTTGGTATCCAAACCTGCTATACAAGGAACACA TTAGATTGCATTCGTGCGCTCATGGATTTCATTGGCTTTGTGCGCTCATGGCTTTTATTGTCATGTAGATTGCATTCACA AGGCAAAAGGACTTTGGAAAGGAACAAAGGGAACTTCAATGGGCGCATGCACAGAGGACATTGCATGGATTACAACCACC TGACACCAAGATGTTCCCTGAGCGCACACATTTCAATGAACTCAATCAAATGGCCGAAGAAGCTAAGCGGAGAGCCGAAA TTGCAAGGTATGGACAGCTATAATTTTAAGCAATTGCATTTTTTGTTTAATAAGGAATTTAATTGGGGAAATAACATCAT AACATTGCCTGCATGTGGCATACGAGGAAGTTGTGAGTTTGAATCTATTCCATTCAAGTAGGATATAAGTTGCAAATAAC TGTGATTATTTGTTTCCTAATACTTGTTTGCAGGTTGAGAGAACTGCATACACTAAAAGGTCATGTAGAATCAGTTTTGA AATTGAAGGGGATTGATGTAGATACAATTCAGCAAGCATACACAGTGTGA 

CDS sequence (LotjaGi1g1v0214400.6) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATTATTGAGATTATTGTTATGTACCCCATCCAAGATCGAGAGTACCGTCCTGGAATTGATAACCTTCTTGTACTTCT TATTGGGGGGATTCCAATTGCCATGCCCACTGTTCTCTCGGTGACCATGGCCATTGGTTCTCACAGGCTATCTCAGCAGG GAGCTATCACAAAGAGGATGACAGCTATTGAAGAGATGGCAGGAATGGATGTGCTTTGCAGTGATAAGACTGGGACTCTA ACATTAAATAAGCTAACTGTTGACAAAAATCTTATTGAGGTCTTCGCAAAAGGAGTGGATCCAGATACTGTTGTTTTGAT GGCAGCTCAAGCTTCGAGACTTGAGAATCAAGATGCAATAGATACTGCCATAGTATCGATGCTGGCGGATCCAAAGGAGG CGCGTGTTGGTATCCAAGAAGTACATTTTCTTCCTTTCAATCCTACTGATAAGCGGACAGCATTGACTTATATTGATCGT GATGGTAAGATGCATAGAGTTAGCAAAGGTGCTCCAGAACAGATCCTTAATCTTGCACACAATAAGTCAGACATTGAACG TAGAGTTCATGCAGTGATAGACAAATTCGCAGAGCGTGGTTTACGATCCCTTGCAGTGGCATACCAGGAAGTTCCAGAGG GACGAAAAGTGAGCCCCGGAGGTCCATGGCAGTTTATTGGCCTTATGCCTCTGTTTGACCCACCTCGGCATGACAGTGCA GAAACGATACGGAGGGCACTGAACCTTGGAGTGAATGTCAAAATGATTACAGGGGATCAGCTAGCTATAGGAAAGGAAAC AGGCCGTCGTTTGGGAATGGGTACCAATATGTATCCGTCATCTGCATTGCTTGGGCATGATAAGAATGAATCCATTTCAG CCTTACCGATTGACGAACTCATAGAAAAAGCCGATGGATTTGCTGGTGTCTTTCCTGAGCACAAGTATGAGATTGTCAAG CGTTTACAAGCAAGGAAACATATCTGTGGAATGACTGGTGATGGGGTGAATGATGCGCCTGCACTCAAAAAGGCAGACAT TGGGATTGCTGTTGCTGATGCAACTGATGCAGCTAGAAGTGCTTCTGATATTGTTTTAACAGAACCAGGCCTTAGTGTTA TTATTAGTGCTGTGTTGACCAGCCGAGCTATATTCCAGAGAATGAAAAATTATACTATTTATGCTGTCTCAATTACAATT CGTATTGTTCTTGGTTTCATGTTGCTGGCTCTTATATGGAAGTTTGACTTTCCACCTTTTATGGTGCTTATTATCGCCAT TCTAAATGATGGTACTATTATGACAATTTCTAAGGATCGTGTAAAACCATCACCTCTGCCAGATAGCTGGAAGCTAGCTG AAATATTTACTACTGGCGTTGTGCTTGGATCTTACTTGGCAGTGATGACTGTCATATTCTTTTGGGCAGCATACAAAACA AATTTCTTCCCGCGGGTATTTGGAGTCTCTAGTCTTGAAAAAACTGCTCATGATGATTTCCGAAAACTAGCCTCTGCAAT CTATCTTCAAGTGAGTACTATTAGTCAGGCCCTAATATTCGTGACTCGGTCTCGAGGTTGGTCATATGTTGAACGTCCTG GTATCTTGCTGATGACAGCTTTTGTGATTGCACAACTGATTGCCACTTTGATTGCGGTGTATGCAAGCTGGAGCTTTGCT GCCATTGAAGGCATAGGTTGGGGTTGGGCTGGTGTAATATGGTTATATAACATAATATTCTACATCCCTCTTGACATCAT CAAGTTTCTCATTCGATATGCTTTAAGTGGAAGGGCATGGGAGCTTGTCATTGAGCAAAGGATTGCATTCACAAGGCAAA AGGACTTTGGAAAGGAACAAAGGGAACTTCAATGGGCGCATGCACAGAGGACATTGCATGGATTACAACCACCTGACACC AAGATGTTCCCTGAGCGCACACATTTCAATGAACTCAATCAAATGGCCGAAGAAGCTAAGCGGAGAGCCGAAATTGCAAG GTTGAGAGAACTGCATACACTAAAAGGTCATGTAGAATCAGTTTTGAAATTGAAGGGGATTGATGTAGATACAATTCAGC AAGCATACACAGTGTGA 

Protein sequence (LotjaGi1g1v0214400.6) extracted from Lotus japonicus Gifu v1.2 Proteins.

MIIEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTL TLNKLTVDKNLIEVFAKGVDPDTVVLMAAQASRLENQDAIDTAIVSMLADPKEARVGIQEVHFLPFNPTDKRTALTYIDR DGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKVSPGGPWQFIGLMPLFDPPRHDSA ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGHDKNESISALPIDELIEKADGFAGVFPEHKYEIVK RLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI RIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVLGSYLAVMTVIFFWAAYKT NFFPRVFGVSSLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRGWSYVERPGILLMTAFVIAQLIATLIAVYASWSFA AIEGIGWGWAGVIWLYNIIFYIPLDIIKFLIRYALSGRAWELVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQPPDT KMFPERTHFNELNQMAEEAKRRAEIARLRELHTLKGHVESVLKLKGIDVDTIQQAYTV 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 22 22 -
Gene3D 1 88 88 1.2E-9
TIGRFAM 1 554 554 7.4E-240
PANTHER 1 678 678 0.0
PANTHER 1 678 678 0.0
SUPERFAMILY 3 595 593 1.16E-49
Phobius 23 45 23 -
TMHMM 23 45 23 -
Phobius 46 390 345 -
SFLD 55 384 330 0.0
SFLD 55 384 330 0.0
Pfam 69 346 278 1.0E-17
SUPERFAMILY 69 379 311 1.24E-38
PRINTS 73 87 15 3.6E-35
ProSitePatterns 75 81 7 -
Gene3D 89 232 144 1.6E-45
PRINTS 189 207 19 5.5E-60
PRINTS 227 238 12 3.6E-35
PRINTS 249 259 11 3.6E-35
PRINTS 304 320 17 5.5E-60
TIGRFAM 307 420 114 4.3E-28
Gene3D 314 594 281 1.7E-110
PRINTS 332 351 20 3.6E-35
PRINTS 332 348 17 5.5E-60
PRINTS 355 367 13 3.6E-35
PRINTS 363 388 26 5.5E-60
TMHMM 391 413 23 -
Phobius 391 413 23 -
Phobius 414 418 5 -
Phobius 419 436 18 -
TMHMM 420 437 18 -
Phobius 437 455 19 -
TMHMM 455 477 23 -
Phobius 456 478 23 -
Phobius 479 502 24 -
Phobius 503 522 20 -
PRINTS 508 529 22 5.5E-60
Phobius 523 533 11 -
TMHMM 533 555 23 -
Phobius 534 555 22 -
Phobius 556 566 11 -
TMHMM 565 584 20 -
Phobius 567 591 25 -
Phobius 592 698 107 -
Coils 649 669 21 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
Molecular function Proton-exporting ATPase activity, phosphorylative mechanism Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) -> ADP + phosphate + H+(out). These transporters use a phosphorylative mechanism, which have a phosphorylated intermediate state during the ion transport cycle.
Cellular component Integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
Biological process Proton export across plasma membrane The directed movement of hydrogen ions (protons) from inside a cell, across the plasma membrane and into the extracellular region.

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0214400.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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