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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR006534
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We have found 73 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 5.535s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0067579.1
n.a. PREDICTED: ATPase 11, plasma membrane-type-like isoform 1 [Glycine max] gi|356508600|ref|XP_003523043.1| chr0 24009873 24019264 -
2 domain predictions
3 GO terms
Lj0g3v0067579.2
n.a. PREDICTED: ATPase 11, plasma membrane-type-like isoform 1 [Glycine max] gi|356516750|ref|XP_003527056.1| chr0 24013773 24020348 -
2 domain predictions
3 GO terms
Lj1g3v1966250.1
n.a. PREDICTED: plasma membrane ATPase 4-like [Cicer arietinum] gi|502132162|ref|XP_004501246.1| chr1 23288263 23297566 +
2 domain predictions
3 GO terms
Lj1g3v5061270.1
n.a. PREDICTED: ATPase 10, plasma membrane-type-like [Cicer arietinum] gi|502114188|ref|XP_004494890.1| chr1 62054875 62063725 +
2 domain predictions
3 GO terms
Lj2g3v1024320.1
n.a. PREDICTED: ATPase 11, plasma membrane-type-like [Glycine max] gi|356572262|ref|XP_003554288.1| chr2 16390764 16398562 +
2 domain predictions
3 GO terms
Lj3g3v0527240.1
n.a. PREDICTED: plasma membrane ATPase 1-like isoform 2 [Glycine max] gi|356520782|ref|XP_003529039.1| chr3 5998704 6006655 -
2 domain predictions
3 GO terms
Lj4g3v1604460.2
n.a. PREDICTED: ATPase 11, plasma membrane-type-like isoform X3 [Cicer arietinum] gi|502152150|ref|XP_004508789.1| chr4 23620272 23625364 +
2 domain predictions
3 GO terms
Lj4g3v1604460.3
n.a. plasma membrane H+-ATPase [Sesbania rostrata] gi|31580855|dbj|BAC77532.1| chr4 23620789 23624835 +
2 domain predictions
3 GO terms
Lj4g3v2120500.1
n.a. p-type H+-ATPase [Vicia faba] gi|4165323|dbj|BAA37150.1| chr4 29062839 29069462 +
2 domain predictions
3 GO terms
Lj6g3v1088780.1
n.a. PREDICTED: ATPase 8, plasma membrane-type-like [Cicer arietinum] gi|502089385|ref|XP_004488894.1| chr6 13078524 13084256 +
2 domain predictions
3 GO terms
Lj6g3v1358600.1
n.a. PREDICTED: plasma membrane ATPase 4-like isoform 1 [Glycine max] gi|356556196|ref|XP_003546412.1| chr6 16142645 16150982 -
2 domain predictions
3 GO terms
LotjaGi1g1v0214400.1
n.a. Plasma membrane ATPase; TAIR: AT5G62670.1 H -ATPase 11; Swiss-Prot: sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type; TrEMBL-Plants: tr|A0A151S7C9|A0A151S7C9_CAJCA Plasma membrane ATPase; Found in the gene: LotjaGi1g1v0214400 LjG1.1_chr1 47281054 47293150 +
3 domain predictions
3 GO terms
LotjaGi1g1v0214400.2
n.a. Plasma membrane ATPase; TAIR: AT5G62670.1 H -ATPase 11; Swiss-Prot: sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type; TrEMBL-Plants: tr|A0A151S7C9|A0A151S7C9_CAJCA Plasma membrane ATPase; Found in the gene: LotjaGi1g1v0214400 LjG1.1_chr1 47281102 47288667 +
3 domain predictions
3 GO terms
LotjaGi1g1v0214400.3
n.a. Plasma membrane ATPase; TAIR: AT5G62670.1 H -ATPase 11; Swiss-Prot: sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type; TrEMBL-Plants: tr|A0A151S7C9|A0A151S7C9_CAJCA Plasma membrane ATPase; Found in the gene: LotjaGi1g1v0214400 LjG1.1_chr1 47281544 47288146 +
3 domain predictions
3 GO terms
LotjaGi1g1v0214400.4
n.a. Plasma membrane ATPase; TAIR: AT5G62670.1 H -ATPase 11; Swiss-Prot: sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type; TrEMBL-Plants: tr|A0A151S7C9|A0A151S7C9_CAJCA Plasma membrane ATPase; Found in the gene: LotjaGi1g1v0214400 LjG1.1_chr1 47281556 47288146 +
3 domain predictions
3 GO terms
LotjaGi1g1v0214400.5
n.a. Plasma membrane ATPase; TAIR: AT5G62670.1 H -ATPase 11; Swiss-Prot: sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type; TrEMBL-Plants: tr|A0A151S7C9|A0A151S7C9_CAJCA Plasma membrane ATPase; Found in the gene: LotjaGi1g1v0214400 LjG1.1_chr1 47281613 47288146 +
3 domain predictions
3 GO terms
LotjaGi1g1v0214400.6
n.a. Plasma membrane ATPase; TAIR: AT5G62670.1 H -ATPase 11; Swiss-Prot: sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type; TrEMBL-Plants: tr|A0A151S7C9|A0A151S7C9_CAJCA Plasma membrane ATPase; Found in the gene: LotjaGi1g1v0214400 LjG1.1_chr1 47281617 47288146 +
2 domain predictions
3 GO terms
LotjaGi1g1v0214400.7
n.a. Plasma membrane ATPase; TAIR: AT5G62670.1 H -ATPase 11; Swiss-Prot: sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type; TrEMBL-Plants: tr|A0A151S7C9|A0A151S7C9_CAJCA Plasma membrane ATPase; Found in the gene: LotjaGi1g1v0214400 LjG1.1_chr1 47281945 47288146 +
3 domain predictions
3 GO terms
LotjaGi1g1v0393600.1
n.a. Plasma membrane ATPase; TAIR: AT2G24520.2 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|V7AUY2|V7AUY2_PHAVU Plasma membrane ATPase; Found in the gene: LotjaGi1g1v0393600 LjG1.1_chr1 87814365 87822301 +
3 domain predictions
3 GO terms
LotjaGi1g1v0393600.2
n.a. Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|V7AUY2|V7AUY2_PHAVU Plasma membrane ATPase; Found in the gene: LotjaGi1g1v0393600 LjG1.1_chr1 87816074 87821324 +
3 domain predictions
3 GO terms
LotjaGi1g1v0393600.3
n.a. Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|V7AUY2|V7AUY2_PHAVU Plasma membrane ATPase; Found in the gene: LotjaGi1g1v0393600 LjG1.1_chr1 87816207 87821324 +
3 domain predictions
3 GO terms
LotjaGi1g1v0393600.4
n.a. Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|V7AUY2|V7AUY2_PHAVU Plasma membrane ATPase; Found in the gene: LotjaGi1g1v0393600 LjG1.1_chr1 87816296 87821324 +
3 domain predictions
3 GO terms
LotjaGi1g1v0393600.5
n.a. Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|V7AUY2|V7AUY2_PHAVU Plasma membrane ATPase; Found in the gene: LotjaGi1g1v0393600 LjG1.1_chr1 87816312 87821324 +
3 domain predictions
3 GO terms
LotjaGi1g1v0393600.6
n.a. Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q9SJB3|PMA5_ARATH ATPase 5, plasma membrane-type; TrEMBL-Plants: tr|A0A1J7HPA9|A0A1J7HPA9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0393600 LjG1.1_chr1 87816624 87821324 +
3 domain predictions
3 GO terms
LotjaGi1g1v0798500.1
n.a. Plasma membrane ATPase; TAIR: AT1G17260.1 autoinhibited H -ATPase isoform 10; Swiss-Prot: sp|Q43128|PMA10_ARATH ATPase 10, plasma membrane-type; TrEMBL-Plants: tr|A0A072U4I4|A0A072U4I4_MEDTR Plasma membrane ATPase; Found in the gene: LotjaGi1g1v0798500 LjG1.1_chr1 136911955 136923951 +
3 domain predictions
3 GO terms
LotjaGi2g1v0255500.1
n.a. Plasma membrane ATPase; TAIR: AT5G62670.1 H -ATPase 11; Swiss-Prot: sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type; TrEMBL-Plants: tr|A0A0B2PVV0|A0A0B2PVV0_GLYSO Plasma membrane ATPase; Found in the gene: LotjaGi2g1v0255500 LjG1.1_chr2 72173633 72182786 +
3 domain predictions
3 GO terms
LotjaGi2g1v0255500.2
n.a. Plasma membrane ATPase; TAIR: AT5G62670.1 H -ATPase 11; Swiss-Prot: sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type; TrEMBL-Plants: tr|A0A0B2PVV0|A0A0B2PVV0_GLYSO Plasma membrane ATPase; Found in the gene: LotjaGi2g1v0255500 LjG1.1_chr2 72173747 72181585 +
3 domain predictions
3 GO terms
LotjaGi2g1v0255500.3
n.a. Plasma membrane ATPase; TAIR: AT3G47950.1 H -ATPase 4; Swiss-Prot: sp|Q08436|PMA3_NICPL Plasma membrane ATPase 3; TrEMBL-Plants: tr|A0A0B2PVV0|A0A0B2PVV0_GLYSO Plasma membrane ATPase; Found in the gene: LotjaGi2g1v0255500 LjG1.1_chr2 72174087 72181276 +
3 domain predictions
3 GO terms
LotjaGi2g1v0255500.4
n.a. Plasma membrane ATPase; TAIR: AT3G47950.1 H -ATPase 4; Swiss-Prot: sp|Q08436|PMA3_NICPL Plasma membrane ATPase 3; TrEMBL-Plants: tr|A0A0B2PVV0|A0A0B2PVV0_GLYSO Plasma membrane ATPase; Found in the gene: LotjaGi2g1v0255500 LjG1.1_chr2 72174146 72181276 +
3 domain predictions
3 GO terms
LotjaGi2g1v0255500.5
n.a. Plasma membrane ATPase; TAIR: AT3G47950.1 H -ATPase 4; Swiss-Prot: sp|Q08436|PMA3_NICPL Plasma membrane ATPase 3; TrEMBL-Plants: tr|A0A0B2PVV0|A0A0B2PVV0_GLYSO Plasma membrane ATPase; Found in the gene: LotjaGi2g1v0255500 LjG1.1_chr2 72174171 72181276 +
3 domain predictions
3 GO terms
LotjaGi2g1v0255500.6
n.a. Plasma membrane ATPase; TAIR: AT3G47950.1 H -ATPase 4; Swiss-Prot: sp|P23980|PMA2_SOLLC Plasma membrane ATPase 2; TrEMBL-Plants: tr|A0A151RD98|A0A151RD98_CAJCA Plasma membrane ATPase; Found in the gene: LotjaGi2g1v0255500 LjG1.1_chr2 72174381 72181276 +
2 domain predictions
3 GO terms
LotjaGi2g1v0255500.7
n.a. Plasma membrane ATPase; TAIR: AT5G62670.1 H -ATPase 11; Swiss-Prot: sp|Q08436|PMA3_NICPL Plasma membrane ATPase 3; TrEMBL-Plants: tr|A0A0B2PVV0|A0A0B2PVV0_GLYSO Plasma membrane ATPase; Found in the gene: LotjaGi2g1v0255500 LjG1.1_chr2 72174381 72181276 +
3 domain predictions
3 GO terms
LotjaGi2g1v0255500.8
n.a. Plasma membrane ATPase; TAIR: AT5G62670.1 H -ATPase 11; Swiss-Prot: sp|Q08436|PMA3_NICPL Plasma membrane ATPase 3; TrEMBL-Plants: tr|A0A0B2PVV0|A0A0B2PVV0_GLYSO Plasma membrane ATPase; Found in the gene: LotjaGi2g1v0255500 LjG1.1_chr2 72174381 72181276 +
3 domain predictions
3 GO terms
LotjaGi3g1v0005200.1
n.a. Plasma membrane ATPase; TAIR: AT1G80660.1 H -ATPase 9; Swiss-Prot: sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase; TrEMBL-Plants: tr|I1M5Y0|I1M5Y0_SOYBN Plasma membrane ATPase; Found in the gene: LotjaGi3g1v0005200 LjG1.1_chr3 640326 646063 +
3 domain predictions
3 GO terms
LotjaGi3g1v0005200.2
n.a. Plasma membrane ATPase; TAIR: AT1G80660.1 H -ATPase 9; Swiss-Prot: sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase; TrEMBL-Plants: tr|I1M5Y0|I1M5Y0_SOYBN Plasma membrane ATPase; Found in the gene: LotjaGi3g1v0005200 LjG1.1_chr3 640625 645661 +
3 domain predictions
3 GO terms
LotjaGi3g1v0005200.3
n.a. Plasma membrane ATPase; TAIR: AT1G80660.1 H -ATPase 9; Swiss-Prot: sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase; TrEMBL-Plants: tr|I1M5Y0|I1M5Y0_SOYBN Plasma membrane ATPase; Found in the gene: LotjaGi3g1v0005200 LjG1.1_chr3 640878 645661 +
3 domain predictions
3 GO terms
LotjaGi3g1v0005200.4
n.a. Plasma membrane ATPase; TAIR: AT1G80660.1 H -ATPase 9; Swiss-Prot: sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase; TrEMBL-Plants: tr|I1M5Y0|I1M5Y0_SOYBN Plasma membrane ATPase; Found in the gene: LotjaGi3g1v0005200 LjG1.1_chr3 640881 645661 +
3 domain predictions
3 GO terms
LotjaGi3g1v0005200.5
n.a. Plasma membrane ATPase; TAIR: AT1G80660.1 H -ATPase 9; Swiss-Prot: sp|Q42556|PMA9_ARATH ATPase 9, plasma membrane-type; TrEMBL-Plants: tr|A0A1J7GTK5|A0A1J7GTK5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0005200 LjG1.1_chr3 641208 645661 +
3 domain predictions
3 GO terms
LotjaGi3g1v0005200.6
n.a. Plasma membrane ATPase; TAIR: AT1G80660.2 H -ATPase 9; Swiss-Prot: sp|Q42556|PMA9_ARATH ATPase 9, plasma membrane-type; TrEMBL-Plants: tr|I1M5Y0|I1M5Y0_SOYBN Plasma membrane ATPase; Found in the gene: LotjaGi3g1v0005200 LjG1.1_chr3 641656 645661 +
3 domain predictions
3 GO terms
LotjaGi3g1v0066100.1
n.a. Plasma membrane ATPase; TAIR: AT5G62670.1 H -ATPase 11; Swiss-Prot: sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type; TrEMBL-Plants: tr|A0A0R0J2X3|A0A0R0J2X3_SOYBN Plasma membrane ATPase; Found in the gene: LotjaGi3g1v0066100 LjG1.1_chr3 7013190 7021842 -
3 domain predictions
3 GO terms
LotjaGi3g1v0066100.2
n.a. Plasma membrane ATPase; TAIR: AT5G62670.1 H -ATPase 11; Swiss-Prot: sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type; TrEMBL-Plants: tr|A0A0R0J2X3|A0A0R0J2X3_SOYBN Plasma membrane ATPase; Found in the gene: LotjaGi3g1v0066100 LjG1.1_chr3 7013586 7020311 -
3 domain predictions
3 GO terms
LotjaGi3g1v0066100.3
n.a. Plasma membrane ATPase; TAIR: AT5G62670.1 H -ATPase 11; Swiss-Prot: sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type; TrEMBL-Plants: tr|A0A0B2RRU4|A0A0B2RRU4_GLYSO Plasma membrane ATPase; Found in the gene: LotjaGi3g1v0066100 LjG1.1_chr3 7013586 7020550 -
3 domain predictions
3 GO terms
LotjaGi4g1v0245100.1
n.a. Plasma membrane ATPase; TAIR: AT5G62670.1 H -ATPase 11; Swiss-Prot: sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type; TrEMBL-Plants: tr|Q7Y066|Q7Y066_SESRO Plasma membrane ATPase; Found in the gene: LotjaGi4g1v0245100 LjG1.1_chr4 59697114 59703873 +
3 domain predictions
3 GO terms
LotjaGi4g1v0245100.2
n.a. Plasma membrane ATPase; TAIR: AT5G62670.1 H -ATPase 11; Swiss-Prot: sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type; TrEMBL-Plants: tr|A0A0S3R7T1|A0A0S3R7T1_PHAAN Plasma membrane ATPase; Found in the gene: LotjaGi4g1v0245100 LjG1.1_chr4 59697160 59704273 +
3 domain predictions
3 GO terms
LotjaGi4g1v0245100.3
n.a. Plasma membrane ATPase; TAIR: AT5G62670.1 H -ATPase 11; Swiss-Prot: sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type; TrEMBL-Plants: tr|Q7Y066|Q7Y066_SESRO Plasma membrane ATPase; Found in the gene: LotjaGi4g1v0245100 LjG1.1_chr4 59697653 59703643 +
3 domain predictions
3 GO terms
LotjaGi4g1v0245100.4
n.a. Plasma membrane ATPase; TAIR: AT5G62670.1 H -ATPase 11; Swiss-Prot: sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type; TrEMBL-Plants: tr|A0A0S3R7T1|A0A0S3R7T1_PHAAN Plasma membrane ATPase; Found in the gene: LotjaGi4g1v0245100 LjG1.1_chr4 59697662 59703643 +
3 domain predictions
3 GO terms
LotjaGi4g1v0245100.5
n.a. Plasma membrane ATPase; TAIR: AT5G62670.1 H -ATPase 11; Swiss-Prot: sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type; TrEMBL-Plants: tr|A0A0L9TRX0|A0A0L9TRX0_PHAAN Plasma membrane ATPase; Found in the gene: LotjaGi4g1v0245100 LjG1.1_chr4 59697738 59703643 +
3 domain predictions
3 GO terms
LotjaGi4g1v0245100.6
n.a. Plasma membrane ATPase; TAIR: AT5G62670.1 H -ATPase 11; Swiss-Prot: sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type; TrEMBL-Plants: tr|A0A0L9TRX0|A0A0L9TRX0_PHAAN Plasma membrane ATPase; Found in the gene: LotjaGi4g1v0245100 LjG1.1_chr4 59698071 59703643 +
3 domain predictions
3 GO terms
LotjaGi4g1v0284000.1
n.a. Plasma membrane ATPase; TAIR: AT3G42640.1 H -ATPase 8; Swiss-Prot: sp|Q9M2A0|PMA8_ARATH ATPase 8, plasma membrane-type; TrEMBL-Plants: tr|I1LZM3|I1LZM3_SOYBN Plasma membrane ATPase; Found in the gene: LotjaGi4g1v0284000 LjG1.1_chr4 65619818 65626269 -
3 domain predictions
3 GO terms
LotjaGi4g1v0284000.2
n.a. Plasma membrane ATPase; TAIR: AT3G42640.1 H -ATPase 8; Swiss-Prot: sp|Q9M2A0|PMA8_ARATH ATPase 8, plasma membrane-type; TrEMBL-Plants: tr|V7CCB3|V7CCB3_PHAVU Plasma membrane ATPase; Found in the gene: LotjaGi4g1v0284000 LjG1.1_chr4 65620202 65624829 -
2 domain predictions
3 GO terms