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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0241200 |
| Transcript ID | LotjaGi1g1v0241200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Trehalose 6-phosphate phosphatase; TAIR: AT5G10100.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|F4KFG5|TPPI_ARATH Probable trehalose-phosphate phosphatase I; TrEMBL-Plants: tr|A0A072V0M4|A0A072V0M4_MEDTR Trehalose 6-phosphate phosphatase; Found in the gene: LotjaGi1g1v0241200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:57635532..57639133) extracted from Lotus japonicus Gifu genome v1.2.
TCTGGTTTTCGTAACTCGACCTTGCCAATTAACCAAAACCGAGCCTGATATTTTTTCCCCACTTCAAAACTTTTTCCTTC TATAAAGTCCAACACCAACCAAAGCAAGAATCCACGTTCTAATAGAACAATCTCTTCTCTACTCTGTTTTTTATTGCTTT TACTCTGTTTCTTCAATACTCCTCAAGTTTTTTATTGCATTGAGGACTTTGAGGTTAAGAAATTGAGAATGACAAAACCG AATGTGTTGACCCCTGACACTAAGTCATGTATTACCACGCTTATTGGCGTGCCTGAATCCATGGCTGTGCTTGGTGGGAT TTTGGGCATTACACAACACAAAAATGTTGTGAAAAAGTTGGAAGGTGCTAAAGTTAGCACCTGGATTGATTCAATGAGAG CTGCTTCACCAACTAGAGTCAAATCTAATAACTTACCCTCCTCAGAAAACCAAGAAAAATGCTCTTGGATTGTAAGCATC TGAAATTTACCCTTTTTCTTTGGGATATTTAAGTATCAAAGATTAGCCTGTTATGTTAAAAGCCTCACATTAACTACACA CATACCACCGAGATGTCTTTATCAAGAGTGAAGCAACTCAAATATTCAAACTAGCTTTTTGATTTGCAGCTTTATCATCC TTCAGCACTGAGCAAGTTTGATGAGATAAAATATAACTCCAAAGGAAAGAAGATTGTGGTTTTTCTTGACTATGATGGAA CTCTCTCACCAATTGTTGCTGATCCTGATAAAGCTTTCATGACTAGACAGGTTTTTCTTTTGGTTCTCTATCCCTCTGTT TCATTCATACCCATTGAGTAAAGCTTATATTTTTTGTGAATGAATTTTGTGTAATTAGATGAGAGCGACACTGAAGAACA TAGCAAAACATTTTCCAACTGCTATTGTGACCGGAAGATGCAGAGACAAGGTACATTTTCTCCAAAGCAGAAAAAAAAAT CAATAACAAACCAATTTTTATTCACCGTGATTTTTTATAATGGTGAAATCAAAGGTAAAAAAAATTATGATGAACTAAAA TTACAGTGCAGAGTCGACAAATACCAAAGATAAAGAAAATTATTTTGCTTTATGGTGATCTTGGTGACATTGATTTTTCC ACTCTGCCTCTAAACACACTCTTAGAAGTAATTATTCATTATAATAATATTTTTTTCTCCTCATTATAATTGATGATGCC TAATGGTTCTTTCTACTCTCTTTTTTCTTTCTTTTAAGGTATTTAACTTTGTAAAATTGGGTGAACTTTACTACGCTGCA AGCCATGGCATGGACATCATGGGACCAACAAAAAGCCGAAATCTTGAGAAAGTAAGAGAGACATGCATTATGTGAATTCA TATTTGATGAGAATTTTATCTTTTCTTTTTTGTTCTTTATGCTTAGTTTATTGATTTGTTGCTTTGTTTCAGGGTAATGA TAAAGTAGTGTTGTTCCAACCTGCTAGTCAATTCCTGCCACTGATCGATGAGGTTTGTTCTTATTCAAAACGGGTTATGA TATATTCACACCTCTCTACTCCTTTTCCACCTTCTCTCTCCTTTATTTCTCTTTTCTCTATCAATCAAATCACCTATCAC ATCTTTACTTTCTCTCTCCTTTCTTCCTATCCCTCTCTTCCTCCACCTCTCCACACCTCAAAAATAAGGTGTGAAGAAAT AATTACTCATTCAAAACCTTCCCGTCAAACTGGCATTTGGCATCAGAAATAGCATAACATATTAACTTTTATAAAAAATA TAATTTATTTATTTCAGGTGTACAAAATATTGTTAGAAAAAACAAAGTCTGTTCCAGGGGCTAAAGTAGAGAACAACAAA TTTTGCTTGTCCGTGCACTTCCGTTGTGTTGACGAAAAGGTAACACAATTTCTTAATAATTGCTGAATTTGTAGATTTAC CTTACCAACCTCACATTGATTGCACAAATTTATCTAACCATTCTTTTGTATTCTCTTTTTGTTCAGAGTTGGGCAGTGTT AGCAGAGAAAGTTAGGTTGGTGCTTAATGAGTACCCACAACTTAGGCTCACTCAAGGGAGAAAAGTGCTAGAGATCAGAC CAACTATCAAATGGGACAAGGGCAAAGCTCTTGAATTCTTGTTAGAGTCGTTAGGTGGGTATATGTTCAGGGTTTTGATA CAATATTGAATACATGCAGTTTCTCTTACATCGTATTTTCATTCCTTTTTTTCTTCTTCTTTTTATTTATTTTTTCATAT GATATCACTTATCATATGTTCTTTTTTAAGAAATGCACTATAGATAAAATTTGGTCTTTGTGCCTTCTACCTTCTACCTT TTTGCTTGTTGATGTTTTATAACCTCCGCCTTTACAGGTTATAAAATTTGATTGGTTCATTTTTTAATTTGTTCAGTTCG TAGCTCAATTAGTTTGTGCCACCAAGAAGTTTCATTTTTTTTATTTTTCTATCTTCTATTTTTATTTTACTTTGGATGTG AATGAAATTTCCTCTCTTATGTTCATGCAAATATAGCCTAGCTTTGAGACAAATATTATAAGCCATTTGTACTAGTTAAT TAACTACAATACTGTTTGTATATTTAATTTGTAGGGTACGAGAATTCTGATGATGTTTTTCCAATTTACATCGGTGATGA TCGAACCGATGAGGATGCTTTTAAGGTAACAAAATGCCCCAACCTAGCTAGCTAGCTAGTTAGAATATTGCTAATTGCTA TTATATAATTCACTTGCACATGTTGACTGACTTATTGACGTTATAAATATAACTAGGTTTTAAGAAGAAGGGATCAAGGA GTTGGAATTCTTGTTTCTAGAGTACCCAAAGAAACCGAAGCTTCCTACTCTTTGCAAGATCCATCAGAGGCAAGCTCAAT ATATTCTCATCCAACATATATATGAAATTTAATGAGAAAATGTTATGCTCTTGTTATTAGAGTTTAATTTATTCTACTTT ATTTTATAAATTATTTCAACTTGTATTGAGAATATGGGTAATGTATTAACAATATCTTTATGCTTACATGCAGGTTGAGC AATTTTTGAGGTGTTTGGTGGAGTGGGAAAGATCCACTATATCGTGACTCAAAACAAGTTTGTAGAGTCGACCGTAGAAT TTAGATGATCGGTTCTAAGAACTGCAACTACCTTAGAATGTCATCGATGAAGGGATCGAAGCATCCAATTTTACAACTTT ATTGTTGAAATGGAAAATAGAATTCCATGATTTTATTTATTAGTTATGTCTGATTTATCAAGAGTACTACGTCGAATAAA CAAAACAAAATTATGGATCAGTATGAAATAATTAAATTTTATTCTGCATTATGTTCTCATCTTACACTACAAAAAAATGC ATTTTTAGTGGCATTGATATTGTTAAGTTGTGGCATTTATTAAATGCCCCAAGTGTTATTAGTGGCATTCACCTTTAAGT GCCTCTATTACATGTGTCACAACTGTTTTGTGGCATTTTTTGCTTAAATGCCGGTTTTGTATGCCACAACTGGTATTGAC ATCTTTTAAATGCCACGAAATGCACCAACCATTGAATTAGGCTCGAACTGTACTGGCATCCTTTAAGTGCCACAAAATGC AC
CDS sequence (LotjaGi1g1v0241200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACAAAACCGAATGTGTTGACCCCTGACACTAAGTCATGTATTACCACGCTTATTGGCGTGCCTGAATCCATGGCTGT GCTTGGTGGGATTTTGGGCATTACACAACACAAAAATGTTGTGAAAAAGTTGGAAGGTGCTAAAGTTAGCACCTGGATTG ATTCAATGAGAGCTGCTTCACCAACTAGAGTCAAATCTAATAACTTACCCTCCTCAGAAAACCAAGAAAAATGCTCTTGG ATTCTTTATCATCCTTCAGCACTGAGCAAGTTTGATGAGATAAAATATAACTCCAAAGGAAAGAAGATTGTGGTTTTTCT TGACTATGATGGAACTCTCTCACCAATTGTTGCTGATCCTGATAAAGCTTTCATGACTAGACAGATGAGAGCGACACTGA AGAACATAGCAAAACATTTTCCAACTGCTATTGTGACCGGAAGATGCAGAGACAAGGTATTTAACTTTGTAAAATTGGGT GAACTTTACTACGCTGCAAGCCATGGCATGGACATCATGGGACCAACAAAAAGCCGAAATCTTGAGAAAGGTAATGATAA AGTAGTGTTGTTCCAACCTGCTAGTCAATTCCTGCCACTGATCGATGAGGTGTACAAAATATTGTTAGAAAAAACAAAGT CTGTTCCAGGGGCTAAAGTAGAGAACAACAAATTTTGCTTGTCCGTGCACTTCCGTTGTGTTGACGAAAAGAGTTGGGCA GTGTTAGCAGAGAAAGTTAGGTTGGTGCTTAATGAGTACCCACAACTTAGGCTCACTCAAGGGAGAAAAGTGCTAGAGAT CAGACCAACTATCAAATGGGACAAGGGCAAAGCTCTTGAATTCTTGTTAGAGTCGTTAGGGTACGAGAATTCTGATGATG TTTTTCCAATTTACATCGGTGATGATCGAACCGATGAGGATGCTTTTAAGGTTTTAAGAAGAAGGGATCAAGGAGTTGGA ATTCTTGTTTCTAGAGTACCCAAAGAAACCGAAGCTTCCTACTCTTTGCAAGATCCATCAGAGGTTGAGCAATTTTTGAG GTGTTTGGTGGAGTGGGAAAGATCCACTATATCGTGA
Protein sequence (LotjaGi1g1v0241200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTKPNVLTPDTKSCITTLIGVPESMAVLGGILGITQHKNVVKKLEGAKVSTWIDSMRAASPTRVKSNNLPSSENQEKCSW ILYHPSALSKFDEIKYNSKGKKIVVFLDYDGTLSPIVADPDKAFMTRQMRATLKNIAKHFPTAIVTGRCRDKVFNFVKLG ELYYAASHGMDIMGPTKSRNLEKGNDKVVLFQPASQFLPLIDEVYKILLEKTKSVPGAKVENNKFCLSVHFRCVDEKSWA VLAEKVRLVLNEYPQLRLTQGRKVLEIRPTIKWDKGKALEFLLESLGYENSDDVFPIYIGDDRTDEDAFKVLRRRDQGVG ILVSRVPKETEASYSLQDPSEVEQFLRCLVEWERSTIS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 356 | 356 | 3.7E-182 | – | |
| PANTHER | 1 | 356 | 356 | 3.7E-182 | – | |
| TIGRFAM | 100 | 350 | 251 | 1.5E-46 | ||
| Gene3D | 103 | 190 | 88 | 3.3E-20 | ||
| CDD | 104 | 342 | 239 | 3.29355E-64 | – | |
| SUPERFAMILY | 104 | 351 | 248 | 3.57E-47 | ||
| TIGRFAM | 105 | 313 | 209 | 5.2E-17 | ||
| Pfam | 106 | 340 | 235 | 3.8E-75 | ||
| Gene3D | 206 | 357 | 152 | 2.1E-23 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Trehalose biosynthetic process | The chemical reactions and pathways resulting in the formation of trehalose, a disaccharide isomeric with sucrose and obtained from certain lichens and fungi. |
Expression pattern of LotjaGi1g1v0241200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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