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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0244600 |
| Transcript ID | LotjaGi1g1v0244600.8 |
| Related isoforms 7 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transducin/WD40 repeat protein; TAIR: AT1G78070.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q9Y7K5|YGI3_SCHPO Uncharacterized WD repeat-containing protein C2A9.03; TrEMBL-Plants: tr|A0A0L9UG10|A0A0L9UG10_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0244600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:58728128..58733277) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGCATTTCAACAACGATGACCTCGAGTACGTCGTCGACGATGGCTTCTACTCCGACAACGCCTCCGACTTCGAAGA CGACCACCACGCCTTCTCCTCCGACGACAAACGGAGCTCCTCCTCCGCCGATTCCCCTGACTCCGACTCCGACTCCGATT TTGAAACGGTAATTTCTCTCTCTTTCTCTCTTTCTTGTTTTTGAAGTCTTTGTTAGCTTCGTCGATGGTGTTCACAATTC ATTGGTTCAATTGATTTTGAAACAGAGTGGTAATAATAGTGCGAAAACTGACACCTCTGCTTCGGAAGCGAGGAACGGGA AGGATATCCAGGGAATTCCATGGGAGAAGCTTAATTATAGCAGAGACGAGTACCGTGTCACGAGATTGAAGCAGTACATG AACTATGAGAATCTCTCTCGTTCACGTGAAGACCTACACAAGGTTAATTTTTATTTTTATTTATAATTTGGAATACTACT ACTATGTATGTAGCTTTTTAATTTTGTTATTAATTTTTGGTGTTTTTTGTTATTTTTGGTTCACAGGAGTGCTTGGAAGT GCAGAAAGGGAAGAGCTTCTATGACTTCCAGTTCAATACCAGGCTTGTCAAGTCCACAATTCTGCATTTTCAGGTACAGT TGAGGCTTTGTTCGTCGCGATTCATTAGTTAACTTAACTATGGATGTTCCACTATATTTGGGGGTTTTGGGGTGATTCAT TTGACTTTTACTGCTATTTATATGTTGGATTTTGACTAGAGTTGCCGTTATTTAGTGACTAAAAACTATTAATCCCAGCT TATGTTCATTGGTTTACTGCTGTTATGTTATCATGTTTGTTATTGCTCATATTTTACTGATATTGTTAACTGCTACTGCT AACTGACCATATAAATAATTTTTCTATGCATGATTTTGGTATTGTTCTAGTTTTGCAGGATTGTGTAACCTGTACTATTT CTTTACAGGATGGAATTAGTGGCTGCGCCTCCTGTATATAAAGATTTATATCAAATCTCTTTGGAATTTCACATGCACAA AACTAACAACCAACTTCAAGTTTGAGAATTTTTCAACACTAATTTATGAAAACCTTGTTCTTCGACTGGAACCCAAAGAA ATTATTCAACTTTTTTGGAAGCAAGTCTTGAGTCTGATCTGGGTGAATTTTTTTCCATGCCCAGATAGAAGAGAAATGAG TTTTCTTTATGATATATTCTTCATAAAGGGTTTCCATACAGAATTTTATTCACTGCATCCTCTCTCTGTTTTTTTACTTT ACAAATTTTCTCCAGGATGCTTCTTTCTTTCCTTAAAACTGTTTTTGAAATTTCTTTCTTTTTAAAAACAAAAAGTAAAC TTTTCTAAAGAATGATCTCCAATAGATGCCACATATTCTTTTGCACAGACAAGACGGTTTCATGCTAATTTATGGATATG GAGGCATCAAGGCTATGGTATGACTTGGCATTCTTAAAATTTTGGTGATGATTTCCTGTGAAAAAGATGTTTTTTTTGCC TCTATGTAATGAGCTTTCATGCGACATACTGAATGACTGTGCACACACAGCACTATGGATCATCCTATAAAAGCTTTAGA GACTTCATACCATCTTCTTCCAGTGTCTGAAATGGATTTCTGATTAAGATTCAGCACCATGAATTGTATTATACAAGTAC AGTTTCTAACTAGAATCAGCAGAGTATTACACTAAAAAAAAGTTGGCCCCTTTATGTTAGTTCTTGTCAAACTAAGCCAA CAATCTGTCTGGGTCCTGAAGTCAAATATTCTAGTTAAGTGAAGATATGTTCAATAGGCTTGGAGACGAAAGCCTACATG GCTGGCAGATTGTCTTTTAAGGCGGAAGGATTAACTTACATGGCACGAAACTGGTGACCATGCAATTAGTTGTCCTTTGA TAATGATAAATTATGTACTTACATGGTTTCAGAGTAGTCATTACAACTGCAACAACAGTTAATAATTCTTAAGCCAAGGT TTCAATATTACAAATTTTTACACCTTGAATAATTTTGGAAGCATTGTATGTTTCCCATGATTATGTCTGCTACGTTATTG TTATATCATTACCTTCTACAGTATATGTGTTCATTTGCCTTTGTAATTATGCACCTATTCATCTAGTAGCTGTTGCACTG TACGTTTCTGCTATATAATTTATTGCTTGACTTGTTTCTGCATTTAGGCCTTCTATTTCTCTCTTTATGTCAGCTTTTAA AGCAGGTGGAGTGTGAGCAGCTTGGCAGGACATTATCTTATGGTATGGTAGGAAAAATATCTGACCACATTTGAGAGGGC TCTAACATTATCAGTTATTTGTTAGTGTTGATTTTGACATTATCAGGAGAGGCCTTGCCTCATATTGTTTGGCTATATAT TTTTAGGATCTTCTTGTCTATAGAATAGTTATCATTTAAATATTTTTTACTTCATATTTAGTTACCTGTTAGATTTCTTG TCTGTCACCTGATTTCTGCAGTAGATTTTGTTTCATTTAGTATATGAAGATCACATTTTTTTTTGGAAGATAAATCATAT CGTTATCATAAAATTGAGTACAAAGGTCATTACAACATCCTTCTCATGAAGGCCCCTTAATTGTGAGCCATATCCTCAAA GCAAAACCAAGGAGGATCAACCCTATTACAACCAATCTTAGTTAGATAGTCTGCAATTGTATTAGCTTCCCAATACGCGT GTCTAACACCCCAGCAATTCACCTCCCCCAACAGAAAATTGATTTGATTCCACTCGTTGAGGAGCTTCCACGGCCTGTTT TGTTTTGAATTCACCCTAATATGAAGATCAATTATACTTCATGGAACTAGTTTTTTTTAATCACTAGTATTTTGAAGAAT TTTTAATTTTACATTTTTATCATCACAGGGCACAAGGTTTAAGTTGATGGAAATAAGTATAGTCACGTTTTCTTTAGAAG TTCTGTATTTTTGTGCTGGGCTTCTTGTTTGAGATCATAAACTCACTCTGCATAATAGTGATTCTTGACTTCAATAATGT TTCATGATTGATTATATAATGACCATTTTTGTGTTTACAACTTGATATTAACCATTTCCGTTTCTGTACTGTCATTGTCT TCCGCTTTCTCTCTACAGAAGTCAGGCTCGTCAGCTGTAGTTTGGCCACTGACTTGCTTCATAATTTTTAGCATTTCTAT TTTTTAAATTCTACCTTTCTTGCATAGTAAAAAGAGAAAAGTGGGAAAATGGCTTTTCTATCGTCTATTTTTCTGTGCTT TTGGACCAATATCAACCCCAACAAATCAAACACTAACCATCCGGTGAAGAAAAATAGAATTGAAGTAACGTATTTGTGTG GAGTTCAGTAGTAGTGTAACTTATAGAGGGTTATATCCACTGTTGAAGTTTTAGGATTATTATGGAAAAGCGTAATGAGA ATTTGTTGTAAATATTACTGACCTCATATCTATATTTACACTAACAATCTAGGTCAAGTACGAAAATAGTACATGTGTAC TTGATTGAATGATATTGTCTTAGTGCTAATACTATAACTTACCAGATATTTGACATAGAATACCCTACTAATCTAACATT GTATTGATATTTATTGATACTAACGTTTCTCATTAACGGATCATGTTTGATAATGGATTGTGATGCTTGATTTAACTAGA ATGGTATCAATACCTTATTTACCAAAATCATATAATTATAATATCTTTCTTTCTTTTCCTGGTTGTGTATTATTACTATT ATCTTCATTATGTTTCTTTCCTGTGCAGCTGAGGAATTTGTTGTGGGCAACATCAAAGCATGATGTGTACCTTATGCAGA ACTATTCAGTGATGCATTGGTCCTCACTACTCCGAAAGGGTAAAGAAGTGCTTAACGTAGCCAAACCAATTATTCCGAAC CTTGTACGTATCCATTTAGTTGATAAAATCTGCTTCTTTTGTATTCAATTGCATTGGATCTAAGTGTTCTGATATTATTT TGCAGAAGCGTACTGGCTTTTTAGCTCAACCTGTCTCCAGAGTGCAAGTAAGCACCATGGCTGTTAAGGAAAATCTGATG GTGGCAGGTGGTTTCCATGGGGAGGTTATTTGTAAGGTAGGGTAAATCATGATTTCTTGCAATTGAATAATCAACTATAT GAAGGGCCCTTGTTTAATGCACGGATTATTTGTGTACCAGAATTTGAATCAGTCTGGAGTTGCATTCTGCAGTAAAATAA CTACAGATGACAATGCCATCACCAATGCTGTGGATGTTTTCCGCAATCCTGGGTAAGCATCTAAATGCAGAATCTTTGAA TTTGAAATTTTTGCTTTGGTTTGATTTGTAACCGAACCTTCACTTTGCAGTGGATCATTGAGGGTCATCGCAGCAAATAA TGACTCCCAAGTTCGGGTTTTTGATGCAGAGAATTTTGCTTCTCTTGGTTGTTTCAAGTATGTTTGGTCTGTCAACGTGA GTGTCATCAACTGATATTCCTATTACTAACTTCATCTCTAGGAACAGTATGCAAGTAACCATTATGTTTACATTTGCAGA ATATTTCTGCTAGTCCGGACGGCAAGTCGTTAGCTGTTCTTGGGGACAGTACCGAGTGTTTGATAGCTGATGTTAATACC GGGAAGGTATGTTTAACTTGCAGTTGTATTTTAGGTGTTATTATCCCTAATTTTTTGTTTAATATCTGATTTTATGCATT TTACGGTGTCGCGTAGGTTACTGGGAGCCTAAAAGGACACTTGGACTATTCTTTTGCATCTGCTTGGCACCCAAATGGAC AAATATTGGCCACTGGGAATCAGGACACAACATGCAGGTTGTGGGACATTAGAAATCTTTCACAGTCCATGGCGGTGCTC AAGGGAAGAATGGGTGCAATAAGGGCCTTAAGGTTCACATCTGATGGAAGGTTTTTGGCCATGGCTGAACCAGCTGACTT CATCCATGTTTTTGACTCACATTCTGGATATGAGCAATGTCAAGAGATAGATATATTTGGTGAGATTGCTGGAGTATCGT TTAGCCCGGACACAGAGGCTCTGTTTGTTGGTGTTGCTGACCGAACCTACGGTAGCTTGTTAGAGTTCACCAGAAATCGT AATCATCATTATGTAGATACCATGTTTTAA
CDS sequence (LotjaGi1g1v0244600.8) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACTATGAGAATCTCTCTCGTTCACGTGAAGACCTACACAAGGAGTGCTTGGAAGTGCAGAAAGGGAAGAGCTTCTA TGACTTCCAGTTCAATACCAGGCTTGTCAAGTCCACAATTCTGCATTTTCAGCTGAGGAATTTGTTGTGGGCAACATCAA AGCATGATGTGTACCTTATGCAGAACTATTCAGTGATGCATTGGTCCTCACTACTCCGAAAGGGTAAAGAAGTGCTTAAC GTAGCCAAACCAATTATTCCGAACCTTAAGCGTACTGGCTTTTTAGCTCAACCTGTCTCCAGAGTGCAAGTAAGCACCAT GGCTGTTAAGGAAAATCTGATGGTGGCAGGTGGTTTCCATGGGGAGGTTATTTGTAAGAATTTGAATCAGTCTGGAGTTG CATTCTGCAGTAAAATAACTACAGATGACAATGCCATCACCAATGCTGTGGATGTTTTCCGCAATCCTGGTGGATCATTG AGGGTCATCGCAGCAAATAATGACTCCCAAGTTCGGGTTTTTGATGCAGAGAATTTTGCTTCTCTTGGTTGTTTCAAGTA TGTTTGGTCTGTCAACAATATTTCTGCTAGTCCGGACGGCAAGTCGTTAGCTGTTCTTGGGGACAGTACCGAGTGTTTGA TAGCTGATGTTAATACCGGGAAGGTTACTGGGAGCCTAAAAGGACACTTGGACTATTCTTTTGCATCTGCTTGGCACCCA AATGGACAAATATTGGCCACTGGGAATCAGGACACAACATGCAGGTTGTGGGACATTAGAAATCTTTCACAGTCCATGGC GGTGCTCAAGGGAAGAATGGGTGCAATAAGGGCCTTAAGGTTCACATCTGATGGAAGGTTTTTGGCCATGGCTGAACCAG CTGACTTCATCCATGTTTTTGACTCACATTCTGGATATGAGCAATGTCAAGAGATAGATATATTTGGTGAGATTGCTGGA GTATCGTTTAGCCCGGACACAGAGGCTCTGTTTGTTGGTGTTGCTGACCGAACCTACGGTAGCTTGTTAGAGTTCACCAG AAATCGTAATCATCATTATGTAGATACCATGTTTTAA
Protein sequence (LotjaGi1g1v0244600.8) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNYENLSRSREDLHKECLEVQKGKSFYDFQFNTRLVKSTILHFQLRNLLWATSKHDVYLMQNYSVMHWSSLLRKGKEVLN VAKPIIPNLKRTGFLAQPVSRVQVSTMAVKENLMVAGGFHGEVICKNLNQSGVAFCSKITTDDNAITNAVDVFRNPGGSL RVIAANNDSQVRVFDAENFASLGCFKYVWSVNNISASPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHP NGQILATGNQDTTCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEIDIFGEIAG VSFSPDTEALFVGVADRTYGSLLEFTRNRNHHYVDTMF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 358 | 357 | 1.8E-217 | – | |
| PANTHER | 2 | 358 | 357 | 1.8E-217 | – | |
| Gene3D | 97 | 352 | 256 | 2.5E-31 | ||
| SUPERFAMILY | 98 | 338 | 241 | 1.83E-34 | ||
| SMART | 175 | 216 | 42 | 420.0 | ||
| ProSiteProfiles | 184 | 310 | 127 | 15.821 | ||
| SMART | 219 | 258 | 40 | 2.7E-7 | ||
| Pfam | 221 | 258 | 38 | 1.4E-5 | ||
| ProSiteProfiles | 226 | 267 | 42 | 13.884 | ||
| ProSitePatterns | 245 | 259 | 15 | - | ||
| SMART | 262 | 301 | 40 | 6.7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0244600.8, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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