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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0256900 |
| Transcript ID | LotjaGi1g1v0256900.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein; TAIR: AT3G08570.1 Phototropic-responsive NPH3 family protein; Swiss-Prot: sp|Q9C9Z7|Y3857_ARATH BTB/POZ domain-containing protein At3g08570; TrEMBL-Plants: tr|A0A0B2S5U1|A0A0B2S5U1_GLYSO BTB/POZ domain-containing protein; Found in the gene: LotjaGi1g1v0256900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:62200269..62204060) extracted from Lotus japonicus Gifu genome v1.2.
GAACAAAAGCAGCCAAAAAGCAAAAGATGGTTTTGGCTATACACACATCACATGTTGTATGAAAACGAAAAGAAAAGGTT GTGTTGTTGTTTGTGTGTGTGTCATGGCATTTGTGAATATTTGATAGCTTTGTTGAGGGCTTTTCGGGGTGTTCACCTCA AAATGTTCCTGAAAACCTGCAATCTTTTTTTCGTACACATTATTTGATAGTTTAATCATCCACAGTCACAGGGTCACAAC TTGTGTTGCTGTTACAGAAACTTACGCAACACATTGAAAGAAAGAAAGAAAATGGTTTCTGAAAACTCTATTTCTTCTTC TAAACACTCTCCAGCTACTCCTAACTTCTCCAACTCATTCACTACAAGGTACTAATTAATACCTTTATTGATCTTTTTGC TTACTAGTTCTCTCTGACTGTTGTTTTTTGTCTAGTAAGAGTGTGATTTAGTTGTCTCTTTTTATTTCATTTGATGGTGG ATTAAGAATGTAGCTTTGGAATACAAAAATCAATGGTTAGGATGTGGCTGTAGGAGCTGGAGGGAAAAAAGTGCTGGAGA GGATCCAAATTCATGTGTTTGCTTTGTTTTCATTTCATTCAAGTTTTATCTTACATGGGGTAGGGTTATAGTTATATAGT ACCTTTTTGTAGATTGTGCAGTTCTTAACTTTGTTAGCCAGTTTCATCTGGATTTTATGAATAAAGGCTATACCATAACA TAGTAATCTTGAAAAATAAAGGTTATAGCTTGTTTGGAAATTCTTCTGCATTTGATTCTAAAGCCAAAATCAGTTCTAGA AGAAAAGAAGCTTATGTGAGTAGTTTCTAGGTGACTCTGAGGAAAAATAAGTTCATTCAAACATATATTAATGTCCAGCA CATGTTTGATTGTGAGATATTTGGAGTTATTAAGGTAGAGAGAGTTATCTAAATTCTTGGGAGAATAGTAGAATTGCAGG TTTAAAGACAATTGTCATGTCATATTGATCTTTTTTTATGGCAGGATTTTTGCTGATGTTGCTGGTGACATTACGATTGT TGTTGATGGGGAATCATTTTTGCTGCACAAGGTAAATCTTTGAAGATGTGGTTTAAAGACTAGACAAATTCATGAGCTTG TTCTGTTTTATATACTACTTTCTATGAATTGGGATTTAATGAATACTTTATGAGATAGAATCTATCATATGTTAGCATGG ACTAAAATCTACAACTGTTTTTCCAAAAGTAATGCCTACTTTAGAAATCAATCAAAGGGAAAAGCTCATGACTCTATTTG GCTTCTTTTGAGTACACATTAGCTCCCCCCATTCAACATAAGACTATTCAGACTTTGTTTGGATATCTGTGACCATCACT GTAAATGAGCGTTAGTCCTCACTTCGAGACAAAAAAAAACAGATGAAACTTTTCTTGTTGATTGAGATGAAAATTCGTTT ACATTGCACTCAACTAGTAACCAAACACACTTAGATGATGTCTTAAATTGACCAAAACAGTTAGATTGAACTCAAAATCT TTAAAAACTAATTTGTTACTTTTTCCTGTATTCATGAAGTTTCCCCTGGTGACCCTAAGTGGGAAGATCAGGAAGATGGT TGCTGAAGCCAAAGGCTCCAATCTTTCAAACTTGGAGCTACTCAACTTTCCAGGGGGATACCCAACATTTGAACTCGCCA TGAAGTTCTGTTACGGGATGAATTTCGAGATCACAACATTCAATGTCGCGAGGCTACGTTGCGCGGCTGAGTACCTGGAA ATGACAGAAGAATACCGGGAGCGAAACCTCGTCTCAAGAACAGATACTTATCTCAATGAGATTGTCTTTCAAAGTCTTCA GAAGTCAGTGGAAGTACTATCCACCTGTGAGATGCTACCTCCAAACATGGTGGAGGAGATTAGAATATCGAAAGGGTGTG TAGAAGCCATTGCAATGAATGCATGCAAGGAGCAACTAGCTTCTGGTTTATCTAAATTAGATTGTGATGGTGAATCTAAA GAACTAAAGGAAGGTTGTGTTGCATGGTGGGTTGAAGATCTCTCAGTGTTGAGTATTGATTTCTTCCAGAGAGTTATAAG TGCTATGGGAAGAATGGGAGTTGGATCAGATAACATCATTGCTTCATTGATTCATTATGCTGAATCATCACTTAAGGGTA TTGGGAAGAGTCAATTTTGGAATGCATCAAGGACAAGTTCAAGTCCAACCAATGGAGAAAAGGATCAAAGGACAATTGTG GAAACTCTTGTAAGTCTCATACCAACAGACAAGAGCTCTTCCATTCCATTGACCTTCTTGTTTGGCATGTTGAAGATGGC TATCATGTTGGGTGCAACCATTCCCTGTGGGCTTGAGCTTGAAAGGAGGATAGCATTAAGGTTAGAAATGGTTTCACTTG ATGATCTTCTTATACCATCTCTGCAGAGTGGGGATTCTCTGTTTGATGTTGATACAGTTCACAGGGTGCTGGTGAATTTC TTGCAGAGGATTGACGAGGAAGAAAGTGAAGATTATGGATATGAATCTGATGAGGTTGTTTCTAATTGCCATGGTTCTCT TCTAAAAGTGGGGCAGCTTATGGATGCTTATTTAACAGAAATTGCTCCTGATCCTTGCTTAAGTCTACTGAAATTCATTG CTTTGATAGAGGCACTTCCTGATTATGCTCGTGTCATTGATGATGGCCTTTATAGAGCTGTCGACATTTATTTGAAGGTA AATTTGCTTCAACTGAAGGGAAACCCCTTTTCTGATTCTAATAGTTATAGCATGTTTGGATCAACTTCTCTTTCATCAGA ATCAATTCTGCAACTTAGATCCCCATAATTGAATTGACTTCCAAATTAATTATATAAGGGTTTCCAAACACGCACTTAAG CACATTCTAGTCAAACTTCATTCTCAATCATGCTAGAGTTACACTTACAAAACTAAGGGAATTACTATTCGTATAGCCGG TTTCTCTCCTTGAACCAACCACATGCAGGTGGGCTAGTGCAGGGAGAGAAAAACGTGGTTCGAATAGTAATCCCCCAAAA CTAAACAGTTGAGTGTGTTTGTTATTCATTTTTCCTTCTTCATGCTGACAAAACACAGCACCTCTTTTTGATCAGGCACA TACAAAATTGACAGAACAAGAATGCAAGAAGCTTTGCAAGTTTATAGACTGCCAGAAGCTGTCTCAAGAAGCATGCAATC ATGCTGCCCAGAACGACAGGCTTCCAGTGCAGATGGTGGTGCAAGTCCTGTATGTTGAGCAGCTGCGTTTGAAGAATGCA CTGTCAGGGAGTTCAGGAGATGGGCTGCAATCACAGAGAATAAGCAGCGGTGTTCCAAGCGCTGCCATGTCTCCGAGGGA TAACTACGCTTCTCTGCGTCGGGAGAACCGAGAGCTGAAGCTAGAGATTTCGAGATTGAGGGTGAGGCTGAGCGAGTTGG AGAAGGAGCAGATGTTCATGAAACAAGGCATGATTAATAAGGCGGGAAATGGAAGAACATTCTTAACCTCCATTTCTAAG GGGATAGGGAGAATTGCCATGTTTAGCAGTCAAGGTGGAGGTAAACGCCAGAAATCAGTTAGGAAGTCTAGGGAGGGAAA AACTGGAAGAAGTAGGAGATACTCTGTCTCATAGATATTGTTCTTCTTCTTAGTTTAGCTTTTACAGCACCCTCCACTTA AACCTTTTCAGGTTATAACAACTTGTAAATGAATTGGTAAAAAGTTTCCCTTAATCTTTAGTCCTAGTCTCACGGTTGAA CTTCAATACTTCACTCTTCTTCTACCCCGTCA
CDS sequence (LotjaGi1g1v0256900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTTCTGAAAACTCTATTTCTTCTTCTAAACACTCTCCAGCTACTCCTAACTTCTCCAACTCATTCACTACAAGGAT TTTTGCTGATGTTGCTGGTGACATTACGATTGTTGTTGATGGGGAATCATTTTTGCTGCACAAGTTTCCCCTGGTGACCC TAAGTGGGAAGATCAGGAAGATGGTTGCTGAAGCCAAAGGCTCCAATCTTTCAAACTTGGAGCTACTCAACTTTCCAGGG GGATACCCAACATTTGAACTCGCCATGAAGTTCTGTTACGGGATGAATTTCGAGATCACAACATTCAATGTCGCGAGGCT ACGTTGCGCGGCTGAGTACCTGGAAATGACAGAAGAATACCGGGAGCGAAACCTCGTCTCAAGAACAGATACTTATCTCA ATGAGATTGTCTTTCAAAGTCTTCAGAAGTCAGTGGAAGTACTATCCACCTGTGAGATGCTACCTCCAAACATGGTGGAG GAGATTAGAATATCGAAAGGGTGTGTAGAAGCCATTGCAATGAATGCATGCAAGGAGCAACTAGCTTCTGGTTTATCTAA ATTAGATTGTGATGGTGAATCTAAAGAACTAAAGGAAGGTTGTGTTGCATGGTGGGTTGAAGATCTCTCAGTGTTGAGTA TTGATTTCTTCCAGAGAGTTATAAGTGCTATGGGAAGAATGGGAGTTGGATCAGATAACATCATTGCTTCATTGATTCAT TATGCTGAATCATCACTTAAGGGTATTGGGAAGAGTCAATTTTGGAATGCATCAAGGACAAGTTCAAGTCCAACCAATGG AGAAAAGGATCAAAGGACAATTGTGGAAACTCTTGTAAGTCTCATACCAACAGACAAGAGCTCTTCCATTCCATTGACCT TCTTGTTTGGCATGTTGAAGATGGCTATCATGTTGGGTGCAACCATTCCCTGTGGGCTTGAGCTTGAAAGGAGGATAGCA TTAAGGTTAGAAATGGTTTCACTTGATGATCTTCTTATACCATCTCTGCAGAGTGGGGATTCTCTGTTTGATGTTGATAC AGTTCACAGGGTGCTGGTGAATTTCTTGCAGAGGATTGACGAGGAAGAAAGTGAAGATTATGGATATGAATCTGATGAGG TTGTTTCTAATTGCCATGGTTCTCTTCTAAAAGTGGGGCAGCTTATGGATGCTTATTTAACAGAAATTGCTCCTGATCCT TGCTTAAGTCTACTGAAATTCATTGCTTTGATAGAGGCACTTCCTGATTATGCTCGTGTCATTGATGATGGCCTTTATAG AGCTGTCGACATTTATTTGAAGGCACATACAAAATTGACAGAACAAGAATGCAAGAAGCTTTGCAAGTTTATAGACTGCC AGAAGCTGTCTCAAGAAGCATGCAATCATGCTGCCCAGAACGACAGGCTTCCAGTGCAGATGGTGGTGCAAGTCCTGTAT GTTGAGCAGCTGCGTTTGAAGAATGCACTGTCAGGGAGTTCAGGAGATGGGCTGCAATCACAGAGAATAAGCAGCGGTGT TCCAAGCGCTGCCATGTCTCCGAGGGATAACTACGCTTCTCTGCGTCGGGAGAACCGAGAGCTGAAGCTAGAGATTTCGA GATTGAGGGTGAGGCTGAGCGAGTTGGAGAAGGAGCAGATGTTCATGAAACAAGGCATGATTAATAAGGCGGGAAATGGA AGAACATTCTTAACCTCCATTTCTAAGGGGATAGGGAGAATTGCCATGTTTAGCAGTCAAGGTGGAGGTAAACGCCAGAA ATCAGTTAGGAAGTCTAGGGAGGGAAAAACTGGAAGAAGTAGGAGATACTCTGTCTCATAG
Protein sequence (LotjaGi1g1v0256900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVSENSISSSKHSPATPNFSNSFTTRIFADVAGDITIVVDGESFLLHKFPLVTLSGKIRKMVAEAKGSNLSNLELLNFPG GYPTFELAMKFCYGMNFEITTFNVARLRCAAEYLEMTEEYRERNLVSRTDTYLNEIVFQSLQKSVEVLSTCEMLPPNMVE EIRISKGCVEAIAMNACKEQLASGLSKLDCDGESKELKEGCVAWWVEDLSVLSIDFFQRVISAMGRMGVGSDNIIASLIH YAESSLKGIGKSQFWNASRTSSSPTNGEKDQRTIVETLVSLIPTDKSSSIPLTFLFGMLKMAIMLGATIPCGLELERRIA LRLEMVSLDDLLIPSLQSGDSLFDVDTVHRVLVNFLQRIDEEESEDYGYESDEVVSNCHGSLLKVGQLMDAYLTEIAPDP CLSLLKFIALIEALPDYARVIDDGLYRAVDIYLKAHTKLTEQECKKLCKFIDCQKLSQEACNHAAQNDRLPVQMVVQVLY VEQLRLKNALSGSSGDGLQSQRISSGVPSAAMSPRDNYASLRRENRELKLEISRLRVRLSELEKEQMFMKQGMINKAGNG RTFLTSISKGIGRIAMFSSQGGGKRQKSVRKSREGKTGRSRRYSVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 291 | 291 | - | – | |
| PANTHER | 2 | 601 | 600 | 0.0 | ||
| PANTHER | 2 | 601 | 600 | 0.0 | – | |
| SUPERFAMILY | 17 | 118 | 102 | 9.42E-15 | ||
| Gene3D | 24 | 150 | 127 | 3.4E-8 | – | |
| CDD | 30 | 128 | 99 | 1.67545E-34 | – | |
| SMART | 33 | 125 | 93 | 0.0023 | ||
| ProSiteProfiles | 33 | 101 | 69 | 10.303 | ||
| Pfam | 34 | 117 | 84 | 3.2E-5 | ||
| ProSiteProfiles | 203 | 485 | 283 | 86.708 | ||
| Pfam | 204 | 461 | 258 | 1.6E-87 | ||
| Phobius | 292 | 313 | 22 | - | – | |
| Phobius | 314 | 606 | 293 | - | – | |
| MobiDBLite | 492 | 515 | 24 | - | – | |
| MobiDBLite | 492 | 511 | 20 | - | – | |
| Coils | 518 | 545 | 28 | - | – | |
| MobiDBLite | 578 | 606 | 29 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0256900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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