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LotjaGi1g1v0278700.2

Overview

Field Value
Gene ID LotjaGi1g1v0278700
Transcript ID LotjaGi1g1v0278700.2
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT2G41970.1 Protein kinase superfamily protein; Swiss-Prot: sp|P93749|Y2197_ARATH Probable protein kinase At2g41970; TrEMBL-Plants: tr|G7KWA4|G7KWA4_MEDTR Tyrosine kinase family protein; Found in the gene: LotjaGi1g1v0278700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:68158871..68160458) extracted from Lotus japonicus Gifu genome v1.2.

ATGGAACTGATGCTGCAATTAAGAAGCTGGATTCCGGTTCTTCGCAAGAACCTGACTCCGATTTCGCAGCTCAGGTAAAA TTTTCATTTGGGATAGTAAATCCATTGGAACAATGTTTTGCCTCTTGGTATTGTCAGTGTCACACTCTACATTATGTCAC TATGGATCATGCAGCTATCAGTTGTTTCAAGACTGAAGCATCAAAATTTTGTGGAGTTGATTGGATATTGTCTAGAGGCA GACAACAGAATTTTGGTTTATCAATATGCAAGTTTGGGTTCTTTGCATGATGTCTTACATGGTAGGCCTAACCATATCAT ATAACTATTTTTTACTAAAGAAATTTCAAGTTTTTTTACTGAAGCCAAGCTTTTGATGTTACAGGAAGAAAAGGTGTACA AGGGGCTGAGCCTGGTCCAGTTTTAAGCTGGAACCAGAGAGCAAAAATTGCATTTGGTGCAGCAAAAGGGCTTGAGTTTC TTCATGAAAAAGTTCAACCTTCGATAGTTCATCGCGATGTTAGATCCAGCAATGTCTTGCTGTTCCATGACTATGAGGCC AAGATTGCTGATTTCAGCTTGACAAATCAGTCTTCTGACACAGCAGCTAGGCTGCATTCTACCAGAGTCTTGGGAACATT TGGCTATCATGCTCCAGAGTATATATATACCCTTAAATTCTACCTTCCTCTTAGTTTAACTTTTTCGCTCTTCTTAATAT GGGTGTCTACACCTAAAGTTGGCTTCAATGAAAAAATTTCTAACACAAATAAGTGTCAGAATATTCAAGCTTCTTGTTGG TTAATCTTTGGGTTCCATCCTAACTAAACACTACTCTTTGTGTATTAAACATAAGTTCATGTTAATTTATGTTATGATTT AGTTTTAAAATGACTAATCTCATCTTCAGGTATGCCATGACTGGGCAGATAACCCAGAAAAGTGACGTTTACAGTTTTGG GGTCGTGCTTTTGGAACTCTTGACAGGAAGAAAGCCAGTAGATCACACAATGCCCAAAGGGCAACAAAGTCTTGTGACTT GGGTATATATCTGTCCCCAATTCATTCATCTTAAGTTTATTGACAATAATTAGTTTATTTTTCCATTATAGTGTACTATT TTGCTGATATATTATTTTTAAAAACTATTTTAGGCGACTCCAAGGCTGAGTGAAGACAAGGTGAAACAATGTGTGGATCC TAAGCTAAACAATGACTACCCACCAAAGGCTATTGCTAAGGTTTGCTCCTTTATTCTTTCACCCAAGTTGACCTTATAGC ATGTTTGGATCAGCTTACTTTTCGTCAGGATCAATTCTGGTATGCAGAAGCTATTCACAAAAGCTTATCCACCAAATTGA TTCTGGCTTTAGAATCAATTGCATAAGGATTTCCAAACATGCTATCAGCTAGTGTTTAACATACTTTGAGACTGTGGCTG ATCATTTGATATGGACATGTAGTTGGCAGCAGTTGCAGCACTTTGTGTTCAGTACGAAGCTGATTTCCGGCCAAATATGA CTATTGTGGTCAAAGCTCTTCAGCCACTTCTCAATGCAAAACCAGCTGGTCCTGACTCTAGTGCTTGA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0278700.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAACTGATGCTGCAATTAAGAAGCTGGATTCCGGTTCTTCGCAAGAACCTGACTCCGATTTCGCAGCTCAGACTGAA GCATCAAAATTTTGTGGAGTTGATTGGATATTGTCTAGAGGCAGACAACAGAATTTTGGTTTATCAATATGCAAGTTTGG GTTCTTTGCATGATGTCTTACATGGAAGAAAAGGTGTACAAGGGGCTGAGCCTGGTCCAGTTTTAAGCTGGAACCAGAGA GCAAAAATTGCATTTGGTGCAGCAAAAGGGCTTGAGTTTCTTCATGAAAAAGTTCAACCTTCGATAGTTCATCGCGATGT TAGATCCAGCAATGTCTTGCTGTTCCATGACTATGAGGCCAAGATTGCTGATTTCAGCTTGACAAATCAGTCTTCTGACA CAGCAGCTAGGCTGCATTCTACCAGAGTCTTGGGAACATTTGGCTATCATGCTCCAGAGTATGCCATGACTGGGCAGATA ACCCAGAAAAGTGACGTTTACAGTTTTGGGGTCGTGCTTTTGGAACTCTTGACAGGAAGAAAGCCAGTAGATCACACAAT GCCCAAAGGGCAACAAAGTCTTGTGACTTGGGCGACTCCAAGGCTGAGTGAAGACAAGGTGAAACAATGTGTGGATCCTA AGCTAAACAATGACTACCCACCAAAGGCTATTGCTAAGTTGGCAGCAGTTGCAGCACTTTGTGTTCAGTACGAAGCTGAT TTCCGGCCAAATATGACTATTGTGGTCAAAGCTCTTCAGCCACTTCTCAATGCAAAACCAGCTGGTCCTGACTCTAGTGC TTGA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0278700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MELMLQLRSWIPVLRKNLTPISQLRLKHQNFVELIGYCLEADNRILVYQYASLGSLHDVLHGRKGVQGAEPGPVLSWNQR AKIAFGAAKGLEFLHEKVQPSIVHRDVRSSNVLLFHDYEAKIADFSLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQI TQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNDYPPKAIAKLAAVAALCVQYEAD FRPNMTIVVKALQPLLNAKPAGPDSSA
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SMART
SM00219
1 252 252 1.6E-12
IPR020635
ProSiteProfiles
PS50011
1 256 256 29.997
IPR000719
PIRSF
PIRSF000654
10 259 250 9.3E-25 –
Gene3D
G3DSA:3.30.200.20
14 51 38 6.2E-7 –
SUPERFAMILY
SSF56112
24 252 229 2.19E-57
IPR011009
PANTHER
PTHR27001
25 261 237 4.6E-107 –
Pfam
PF07714
25 252 228 2.0E-37
IPR001245
PANTHER
PTHR27001:SF697
25 261 237 4.6E-107 –
Gene3D
G3DSA:1.10.510.10
52 262 211 1.9E-58 –
ProSitePatterns
PS00109
102 114 13 -
IPR008266

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0004713
Molecular function Protein tyrosine kinase activity Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0278700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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