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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0283600 |
| Transcript ID | LotjaGi1g1v0283600.2 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphomevalonate kinase; TAIR: AT1G31910.1 GHMP kinase family protein; Swiss-Prot: sp|Q9C6T1|PMK_ARATH Phosphomevalonate kinase, peroxisomal; TrEMBL-Plants: tr|A0A1J7GGC5|A0A1J7GGC5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0283600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:69069563..69073708) extracted from Lotus japonicus Gifu genome v1.2.
TTGTCGTTGACCACATGCTGCTGGTTATCTCTTACATTAGTTGACCACATGCTGTTCTTGGAATTATTAGAATGTTCCAG AAACATCAATAACTTAGTAGTCTTTGTTTTATTGGCTTTGTAGGTTGCAGCTCAAGTAGTGCCCTTGCCAGAAGTTATCA CTGACATTCTAAAAGGAAACTGGGACCATGACAGGACCGAGTTCTCTTTACCACCTTTGATGACTCTTGTAAGCAACTTC AATTTTTGCAACTGTTGGGATATGTTCACATGTCTTGTAATTATGGCTATGGGCACTTACTTCCTCTCTGCCTCTCTTCC CTCAATATTTCGAAGGGATGGGTGGTGGGATGTACCTAATTCTATAGTTGTACTTGCAATTTCTATTCATAACCTTATTT TAACGGTTAAGAAAAAATGTGTTTTCTCCAGGCTTGTTAATAGCGCGCTATAGCGTAGCGCCCTAGGGGTTCACCGCTAC TCCACTATTCACCGCTATTTGCGCTATTTGCCGCTATAGCGCCGCAATAGCGTTTTTTGGGCTTGCCGCTACACTACGCT ATCCGCCATTAACAACCCTGGTTTGCTCATGATTTAGGCTCTTCTCCTCTTACCATTTCTTAGGACTTTTCAAAATTTGT AGGCTTTTGTTCCATGTAAGGCTTTTCGTATCCACAATCCACAGTTTGGACTCCCGGTTACCATGCCTTATGATGTCTAA GATCTTGCCTTTTATTGAACTTTTTTATTGTTTAGCTTTAGACTTTTTTGGTTGAATACTTGGTTTGTTGTCCAGTATCC AGTGCAGTGCACTGCCAACTACTCAGCCTAATGTGATATTTACAATTCAGGTGGTGTATTCTTGATTATTACAATTGTGT GAAGGAAACAATTAATAACATCAATGGCAGAGGTTTTAGTTCCCAAGGATCAGGCTGTTTGTCTTGATTTAAAGAAAATT ATCCATGTGACCATGTGAGATTTGGAGGCTAAGAGCCATTGAAGGCTTATCTATTAGTTCCTTGTTTCTCTGTGTTGTTT TATATTATTGTGATTTTCTATGATTAGTTTATTGTGAATTTGTGAGCAGCAAATGTAAACATTGAAGTGCATTTTAGTTA ATGACTTAAGAGGCAGAAGCTTAATGCTTCTTGTGCCATAAATTCTTGAAATCAAGTTAATTAATCTAATTGTGCAAGTT ACCAGTTTAACTTACAGAAAGCTTGGTGCTTCAATTTTCCAATTATATTCTGATTCTGAGTAGTACAAAGGAGAGCCTTC GTGTAACGGTTAAAGTTGCTAGGCAAGGTAAGGCTGCCTAGTGCCTATAATAGACCCCCAATGAGTTCGACCCTGCCGTG GCCAGAGTTTATTAATATCATGTTCTCTGTTTTCAATATGGGTGAATAGCTCATAAGATTCACTTAAACAGTTACCAACT TTCAAAATCAAAGAAGTTGAACCATATGTTACAAGGTTGAATTTATGTCCACAACTACATATTCACGACAAACAGTTACC ATCTTTTTTCATATTAAAGGAAATGTATTAGTAGGTGTCCCAGGATCTCTTTCTTGCTCTGTATCCTGTTCTGGTTCAGC AACTGACTTGATATGAATATCTATATTGAACAACTATGGTGTGGAAATTATTCCCATTTCTCTCTTACAAGCATCTCTCT CTCTCTCTCTCTCTCTCTCTCTCTCCTGTATCCCCTAAATTTCATTTTTCCAAATACTGTTTTAACTTGTTTGACATATG AACTCTCTTGGTTCCCTTATTGATGCCTTTATTTAGTTATTAGGAGAACCTGGAACTGGTGGATCATCCACACCATCAAT GGTTGGTGCAGTCAAAAAATGGCAAAAGTCTGACCCTCAGAAATCCCTAGACACATGGAGAAGATTGTCAGAGGCGAATT CAGCATTGGAATTGCAGCTCAACTTGTTAAGCAAATTAGCAAAGGAGCAGTGGGATGCATACAAATCTGTGATTGACAGC TGCAGCATACTCAGATCAGATAAGGTATTTATTTGATATCATTTGTGGTTGTTTAATTCATTGAAGTTAGTCAAAAACTG AATATTTATTATTTTGTTACTAAAGTGTATTGATTCACAAAGCTCTCCATTGGCCTCAAATAACTTTGAACATTATATTT GGACGGTAATCCTTAAATTGGATTAGAGTTTGATACTTTTCTTCTCATGTCAGCTCTTCATTAAATAGGACGCCTATCTT GATTAGTATACTTCTCTTATTAGTTTTGATTGGTTTGAAAGACAGACATGCAGCAGTATGTCTGACTAGAGCTACCTTGG AAATGAGTAGAGAAGCTTATTTGCTGCCTGCAGGCGACCTTCACTCTCATTATAGGTTACTAGAATTTAAAATATTCTTG AGAGTCTGATTCTGGCTTGATGTAGTGTTATAAGTTACTTTAAATTTTAACACCCTTGATTGTTTTTGTACCTCTTGATT TCCTTCATGCTTTGATATGACCTTATTACCTGAGAGTTTTGAACCTTGTCACTCACAATAGATTCAAACCTGATGATTAT GGAATGATGAACATTTCCGGGGCCCAACTATAATTGATCAGTTTGGTAACCCTTAGAAATGGAGGCTGAACAATTCACTG ATGGCATTTATGAAAAACTGTTTCAAAGTCACCAGTTAAATTTACGTCCCCATTTTTAAGGGCATACCCAGACTGACCTT TTAAGGGGAAAGATTTGACGGGATCCTTTCATGTGGCATGGATATGAGGAGGAGCAAAAAAAAAGTTGTTTCTCCTACCT TGCTTCTCATGCCCAGAAATTGTATTTAATATTTTTGATTATAGGGAAGCGCCCAAGCTGTATAAATCTATGATTCAGTT AACTCCAAACGAAGTTCTGTAGCTATTGCAGGCCTGGGTTTCAGTTTCAGGCTGTAAACTTTTTAAGTACATGTGATGTT ATTTTCTTGGGACTGCTCTTTCTTGCTGTCAAGTTTTAATAATCTTTGATGTATTGTGACATTTCTCCAAGCTGTATAAA TCTATGATTCAGTTAACTCCAAACGAAGTTCTGTAGCTATTGCAGGCCTGGGTTTCAGTTTCAGGCTGTAAACTTTTTAA GTACATGTGATGTTATTTTCTTGGGACTGCTCTTTCTTGCTGTCAAGTTTTAATAATCTTTGATGTATTGTGACATTTCT CCTTGCTGATCTTCTTTTGTGTTGATGCTTGGAATGCAAATTGCATAATCAGTGGATAGAACAAGCTTCTGAACCTGTAA AGGAAGCAGTTATTAAAGCACTGCTGGGTGCAAGAGATGCCATGCTGGGAATTAGATATCATATGCGCCTGATGGGCGAG GCTTCAGGGGTTCCAGTAAGTTCATTTCACTGATTCAGCACCTATTTGTATAGTTCTTTGTTGGTATGATGTCGATATTG CCTATGAAAATGCATGTCCAGTAGACTGTGTTACCCTTAAGAATTTTATTTTTGTTGAAATTTAGTGATTTTGCTTCATA CGTTAACTCCTGGTGAGGTACTAATCTCTAATCTTCCTACCATAAAAGTATAATATAGAACCATCCGTGTGGCTTCCCCA AACAAGTTAAGCTTTTTGGATAGTTGGTTCATAATATACTATCAGTCTATCGGAGCTTCTATGGCTATATGGTCTAGAGT TAAGATACGAATTAAATTGTGTTTATGGAACTTAAATATGCTGTATTTAGTTAAGTGTAGTCTGGTTTGCTTTCCTGAGT GATCAATCATTTAAAAGTTTAACAATTTATGAGTTCAGCAGTCTCTTGACTTGTAAAGTATACAGATTGAACCTGAAACA CAAACACAACTTCTGGATGCTACAATGAACTTGGAAGGAGTATTATTGGCTGGAGTTCCAGGGGCAGGAGGATATGATGC AGTCTTTGCTGTTACTTTGGGAGATTCGAGCAGCAATGTGACTAAAGTATGGGGCTCACTGAATGTTCTTGCCATGTTGG TTAAAGAAGACCCTTGTGGTGTTTCTTTAGAAAGTGCTGACCCAAGAACCAATGAAATCACATCAGCAGTGTCTTCAATT CATATTGAATAGGCTCATCTCCATCAATTACATATTGTAATCTGTGGAATATAGCTTCTAGACTAG
CDS sequence (LotjaGi1g1v0283600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTCTTTTATTAGGAGAACCTGGAACTGGTGGATCATCCACACCATCAATGGTTGGTGCAGTCAAAAAATGGCAAAA GTCTGACCCTCAGAAATCCCTAGACACATGGAGAAGATTGTCAGAGGCGAATTCAGCATTGGAATTGCAGCTCAACTTGT TAAGCAAATTAGCAAAGGAGCAGTGGGATGCATACAAATCTGTGATTGACAGCTGCAGCATACTCAGATCAGATAAGTGG ATAGAACAAGCTTCTGAACCTGTAAAGGAAGCAGTTATTAAAGCACTGCTGGGTGCAAGAGATGCCATGCTGGGAATTAG ATATCATATGCGCCTGATGGGCGAGGCTTCAGGGGTTCCAATTGAACCTGAAACACAAACACAACTTCTGGATGCTACAA TGAACTTGGAAGGAGTATTATTGGCTGGAGTTCCAGGGGCAGGAGGATATGATGCAGTCTTTGCTGTTACTTTGGGAGAT TCGAGCAGCAATGTGACTAAAGTATGGGGCTCACTGAATGTTCTTGCCATGTTGGTTAAAGAAGACCCTTGTGGTGTTTC TTTAGAAAGTGCTGACCCAAGAACCAATGAAATCACATCAGCACTTCTAGACTAG
Protein sequence (LotjaGi1g1v0283600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTLLLGEPGTGGSSTPSMVGAVKKWQKSDPQKSLDTWRRLSEANSALELQLNLLSKLAKEQWDAYKSVIDSCSILRSDKW IEQASEPVKEAVIKALLGARDAMLGIRYHMRLMGEASGVPIEPETQTQLLDATMNLEGVLLAGVPGAGGYDAVFAVTLGD SSSNVTKVWGSLNVLAMLVKEDPCGVSLESADPRTNEITSALLD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 27 | 27 | - | – | |
| PANTHER | 1 | 195 | 195 | 1.3E-75 | – | |
| PANTHER | 1 | 195 | 195 | 1.3E-75 | ||
| MobiDBLite | 7 | 21 | 15 | - | – | |
| Gene3D | 9 | 178 | 170 | 4.3E-5 | ||
| Pfam | 106 | 162 | 57 | 1.5E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0283600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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