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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0287900 |
| Transcript ID | LotjaGi1g1v0287900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinesin light chain 3; TAIR: AT5G53080.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|P0CI65|NPHP3_DANRE Nephrocystin-3; TrEMBL-Plants: tr|A0A151RZS1|A0A151RZS1_CAJCA Nephrocystin-3; Found in the gene: LotjaGi1g1v0287900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:69839977..69845406) extracted from Lotus japonicus Gifu genome v1.2.
CTAAGATTTGATCCTTAAACGAACCAAGACAAGGTTGGTTGGTTTCTGTTCTATGAGCAATGGAAGCTTCGCTTCTTCTT CCCTCTCACTCAGTCACTGGATTCAGGTACTCTCTCTTCTCTAACTTTGCTTGCAATTCTGTGAGGTGGGTCTTTCTGAA TTGTGCTCACTTTACTTGGTTCAACTCTAATATCCATTTACATGCCACTGTTTTGTTAATTTGCTGCAACAATCACCTTT AGATAAGAACAATTTGATTAATTCAACCTTGTTTGCTACTAAGTACGTGCTGAATAATAAAGGATAATGCTCCTTACAAT TATTAAACTTGTTCAACTGCTTTTGGATAGCTCACCATCTCCTATATGATATCTGTTTTTTTGAAGTATTGGATACTTGG AAAGGAGCATGTGTGAGTTTTGTTAAAAAACTTAATTAAGTGTTTATAGCAACTTATAAGTGCTTATTCATAAGCTGATT TGAGAAAGTTATTGAAATAAGTTCAAAACAGATTGTAGGTAGGTATAAGCCCTTATTCATAAGCTACTCTGACTCAGCTA AAAACAGCGGTGCGGAAGCGTAAAATTGTGGGATTTTAAGATTTTGCTAACATTGCTACAGGGAGTAGCTTTTGTGGGAG GAGAAGTGATTTTGAGACGATTAAAAGTGGATTCAAAACATATTGTATCTTGTTCATGGGTTGAACTTTTAGATTGTATT TGAAAAGTTAAGATTCATTAAACAGATGGAACTGGACACCAGCACACTAATGTATATGAATAGAGGCAGAAATTTTATAA ATAATTCAGGTGCAAGTTTTGGCCAAGATGCATTTTTAATCTGTGAGTAAAAATAGTTGTATTTGGTTATCCTTATTGCT TTTTAGTTGTGAAGTCTTGATTTTGTTGTAAATATCTGATTAGAATGATAGGTGGCGCCGTGGCGGCATGGTCTAATGTT TTCTCTAATCTATTCTATTTTTAGGGCTAGCAAAGAGCTTCCGCATGTGCTGTCACTGCGTGAGTTGAAAAGCATAATAT GCTTCTCAGTTTGTAATCAGAAGCAAAGTTACAATCGAAAGTTTTACATTCTACCCATTAGGACTGTTTCTGGGTTCTGC ACTTCAAGATCCTCAGTTAGGTCATTGGAATTCAGTGGGACAGGCCCACATAGTGATGCTCATTCTGGTTTTTCAGCTCC AAATGACAATCAGAGGTGGGAATTGGTTCAAATGATTTAACTTCTTCTTTTCTTCCGTTATTTATACTTGTTGTATATTG AAATATTTCAATATTCTTGTTGTGCCTAAAATTTCCGGACCAATGTATTAGAATTTTATCCTTTAAGGAGAAAGCATTTT TGTATCATCATTATAACTTAAATTTCTCAGTATGAAAACTCTCTTGACTCTGCAAGTTATACATTCCACAGATATAGCAA TTTTGAGAAAGAGTTGGAAGAATTATTTGTTGAAGTGAAAAGAATGATTAAAACGGGAAAGAAAAATGATGCTATAGACC TGCTTAATGCAAATTATGAAGTGGTGAAAGAGCAGATGAATGCAGGCACTAAAGGCATAGAAGAAGCTGCAATGTTAGAC ATCCTAGCATTGGGCTACATGGCTGTTGGAGACTTAAAATTTGTTGGTTCTCTGTTGAATTTGGTATTCCTCCCTTCCTG TCTCCATCTTGTGCATTCTTCAGTAATTTTGATATCTTGTATAATTATATTTGAGATTCTTTGGATTCATAGTAACTTAA ATTTATGTCAGCATGGGTCATTAGTTGAACTCTCAGAATCCACACCATGTTTAAGTATGTAATCCATATTCTATGCCTTT TTAACTGTTTAAGAATTAAGAGTAAAGATTTATGCCATGGTAATAGTTCCAGTTTTTACTAAAATGAGAGTACGGTAAGA AGTCAACTGTTTTTATTTACTTTCATGAGTTAACAAATTTTCCCTGGCTTGTGAGGCTTGAATGAATAATTGATCACCAA AATATGTGCTGCCAAATTAACTGCAATCATTTTTCGCTGATGGGCATGTTTTCATGCACGCGACTGAGTGTTTCCACATG TATGCTTATTAACTTTCGATTAGTATCACATTTTTTACTCCTTCATACTGAAGTACCTTCCTTTGTATCTGTCTTAGTAT GTATTAACCTAACTGACAGTTTCAAATAATGTTATGTTCCACATTTCTGTTAAAGGCATACATTATGCACATCTCTTTTT GTTGTTATTCCCACCCTTTAGTGACTCACTCCCCTTTCTCTATGGTTTGCATTTTTATGTTTTAATTAATGATTAGATGA AAGAAGTTGTTGACAACTTAAAGGATGATGCACCACATATAGATTCAATACTTGTGCATATGGGCAGTCTGTTTGTGAAG TTAAGCGAGTTTGAAAAATCATTGAACGCGTATCAAAGGGCTGTGTACATTATGGAGAAGACCTATGGTGAGTGCATTTT CAGTTAGTAATGCCAGTCTTATTTACTATTTAATTAATCTTATTTAGCTATAATTAAGGGGTGTGGTTATGTTGTGTTGC CTATCTGTTTGATTACAAAACTTTAGCTATTTTCATGATATTTTCAATTTTGCATGTCTAGTTAGAAGCTACTTTTAAAA GTTCTTCTCCAGATACACCATAGTGGAAATGATTCATTGTGAAGCCAACTTAGCTTTTAATTTCTGTATTTAATTTTTCC AAATCTTTGTATTCTCAATATAATTTATTCTTTTAGGTAAGGATAGCACTATGCTTGTGACACCCCGTTTGGGTATGGCA AAAGCTCTTGGTTCCGTTGGAAAAGCAACAAAAGCAATAGAGATATACCAGCATGTTATTAGTCTCTTGGAATCAAGTAG AGGTGCTGAAAGTAAGGACTTGGTTATACCTTTACTTAGTCTTGGCAACCTTTTACTGAAAGAAGGGAAAGCCAATGACG CAGAAAGCCACTTTACTAGGTTAAGCTTCCTATTTTTGTTTTCTCCTTCTAATTTCTGTCTAGTAGTGGCTCTCTTTCCT CTATATTAACTCTATTTATTGTTGTTTTCTAGGGTTCTAAACATATACACAAAAGTATATGGACAAAAGGATGGAAGAAT AGGAATGGCTATGAGTTCCCTAGCCCAAGTGAAGTGTGCTCTAGGTAACTTCATAATCTTGCTCATGTATTTTCTCTGTG TCTCAATCTTCCTTTTTTCTTAAATATCCCCTCCCCTTTGGGGGCGTTAGGTAGAAGGTTGGGAAATACATCCCTGGGAA TAATATTCCTGGGAGTCTGATTGTTGGGAATATCATTCCTGGCTAAGACTTTGTCTATTCTTTCTTTCATGTATGGGTCT TGTATCATGCAGAATAATGGTGGAATAAACACCTATATCTACACATAAAGTTTATTTGGTGTTAATCCATATAAGAAAAT TACTGCATGCCATTTTTTAAAAATGTTGTCCAAGAGCAGGCCCTAACTTCTGCTTTCTTTTACTTTCCCTTTTTTTACGC ACTTATTGATGTGTGATATATTTTGCAGGGAAGTCAGATGAAGCAGTTAATTTGTTGAAAGGTGCTCTTAAGGTCATGAA GGAATCAAATTACATGTCACCGGATGACAGTATTATGGAAAAGATGAGGGTAGATCTAGCTGAGTTACTCCATGCTGCTG GGAGGTAAGCTTCTCTACAACTTTTTTAGCAAGAAAGAAATATTTAAGTATTTGATAGCATTTAAGAATAAAACCAGGCA ACATAAGGTGTCTTACTTTTTCATGTTGCACACCCTTTGTATCTTCAAATAACCTAGTGGTTTTACTATACCACCCCCCA CCTATACCAAAAAAAGGAGAAAAAAGTAAGACTAAGTAGGTTATTGAGTTGAAGTGTTGTGCATATGGTAACTCGACACT TATTGCGGTTGGTTTCTGTTGCTTTAATTCAAGAGGACAAGAAGGTAGAGAGGTGTTAGAGGAGTGCTTATTAATCACTG AGAGGTCCAATGGAAAGGATCACCCGAACTTAGCGGTACACATGATAAATCTTGCAACTTCATATTCACGGTCGAAGAAT TATGCAGAGGCTGAACACTTGCTGAGAAGAAGTTTGCAGATCATGGTAAAGCATAAGGGAACTGATGACCAATCCATTAG CTTTCCTATGTTGCAACTTGCCGTTACACTATACCATTTGAAAAACGACGAAGAAGCAGAGAAACTTGCCCTGGAGGTTT TGCGCATCCGCGAGAAGGCATTTGGGGATTATTCTCTTCCCGTTGGTTAGTTTCCCGTCTCCTCCTTGAAAACATGGTTC CTCATAATAGTTAATATGATCAAGACAGTTAAACAGCCATTATGTAGATAGTTAATTTCAGTTGCATTTCACTTATGAGT GTAAGGGCAAACCTGGGGCTATAAAGCTCTCGCTATGTGTGAGGTATAGGTAGGGGCTGGCCCCACGTTTGGATTTAATG TAGCCAATATTACCTTGCACTTTGGCAAGAGGCTGATTCCACAGCTCGAACTTATGCCCGCAAAGTCACATGGCAGCAAC CTTACTGTTGCGCTAAGGCTCGCCCTCATTTCATTGATGAGGGTGCTAATCAAATTCTTACAATGAAGAAAAAAACCATG AACCTAACTTTCCCCCATATTGTTTTTCTTTTAATGACTATTATTAATCTTATATTATGCATGGCAGGGGAGGCTTTGGA TTGTTTGGTGTCTATTCAAACCAGACTGGGTAAGGATGAAAATGAGTTACTTGATGCTCTTAGAAGGATCTTAAATATCC AAGAGAAGGAATTTGGATATGAAAGTGAAGAGGTTTTGGTTACACTACAAAAAATTGTATACTACTTGGATAAGCTAGGG AGAAAAAATGAAAAGCTACCTTTAGAGAGAAGGTTATCTGTGCTTAGGAAGAAGTTTAAGATGATGGTTCCTCATAGTGG GAAATAACAATATGATTTATTATGTTTGTAATTTATCTTTAATGCTTGAAGCGTTTCTCCAAATGTTTCCATGTGCAGTC AATCATGCATTAGTGCTAGTTCTTTAAGGTTTTCAGCATTCTTTACAATTTAGCACAAATTCTAATGCCCCAACTCAAAG AAACAATAGTTGGTTAGTACCGCAGAACAAGCTTATGTTTGAGTTGTTGCAAACATAAAAGTAAAACACACTCACATTTC TATGTGAAAATAAGTGAATGATAGATTTCAGATTCCTAAAATCTAGACAAATTTTGTTACTCCCTCATCCACAAAAATTA TTGTTTAAGGTTGTGGCACAAAGAGTAAGATGACAATTATTGATAGTGTAATATTACTAAAGTACCCTTATTTAATTTTA CTTGTATCATGTGTAGATATTAAATTTTGCTTGAATAGAGAAGAATGTAGTTGATAATAAGAGTTGTGAT
CDS sequence (LotjaGi1g1v0287900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGCTTCGCTTCTTCTTCCCTCTCACTCAGTCACTGGATTCAGGGCTAGCAAAGAGCTTCCGCATGTGCTGTCACT GCGTGAGTTGAAAAGCATAATATGCTTCTCAGTTTGTAATCAGAAGCAAAGTTACAATCGAAAGTTTTACATTCTACCCA TTAGGACTGTTTCTGGGTTCTGCACTTCAAGATCCTCAGTTAGGTCATTGGAATTCAGTGGGACAGGCCCACATAGTGAT GCTCATTCTGGTTTTTCAGCTCCAAATGACAATCAGAGATATAGCAATTTTGAGAAAGAGTTGGAAGAATTATTTGTTGA AGTGAAAAGAATGATTAAAACGGGAAAGAAAAATGATGCTATAGACCTGCTTAATGCAAATTATGAAGTGGTGAAAGAGC AGATGAATGCAGGCACTAAAGGCATAGAAGAAGCTGCAATGTTAGACATCCTAGCATTGGGCTACATGGCTGTTGGAGAC TTAAAATTTGTTGGTTCTCTGTTGAATTTGATGAAAGAAGTTGTTGACAACTTAAAGGATGATGCACCACATATAGATTC AATACTTGTGCATATGGGCAGTCTGTTTGTGAAGTTAAGCGAGTTTGAAAAATCATTGAACGCGTATCAAAGGGCTGTGT ACATTATGGAGAAGACCTATGGTAAGGATAGCACTATGCTTGTGACACCCCGTTTGGGTATGGCAAAAGCTCTTGGTTCC GTTGGAAAAGCAACAAAAGCAATAGAGATATACCAGCATGTTATTAGTCTCTTGGAATCAAGTAGAGGTGCTGAAAGTAA GGACTTGGTTATACCTTTACTTAGTCTTGGCAACCTTTTACTGAAAGAAGGGAAAGCCAATGACGCAGAAAGCCACTTTA CTAGGGTTCTAAACATATACACAAAAGTATATGGACAAAAGGATGGAAGAATAGGAATGGCTATGAGTTCCCTAGCCCAA GTGAAGTGTGCTCTAGGGAAGTCAGATGAAGCAGTTAATTTGTTGAAAGGTGCTCTTAAGGTCATGAAGGAATCAAATTA CATGTCACCGGATGACAGTATTATGGAAAAGATGAGGGTAGATCTAGCTGAGTTACTCCATGCTGCTGGGAGAGGACAAG AAGGTAGAGAGGTGTTAGAGGAGTGCTTATTAATCACTGAGAGGTCCAATGGAAAGGATCACCCGAACTTAGCGGTACAC ATGATAAATCTTGCAACTTCATATTCACGGTCGAAGAATTATGCAGAGGCTGAACACTTGCTGAGAAGAAGTTTGCAGAT CATGGTAAAGCATAAGGGAACTGATGACCAATCCATTAGCTTTCCTATGTTGCAACTTGCCGTTACACTATACCATTTGA AAAACGACGAAGAAGCAGAGAAACTTGCCCTGGAGGTTTTGCGCATCCGCGAGAAGGCATTTGGGGATTATTCTCTTCCC GTTGGGGAGGCTTTGGATTGTTTGGTGTCTATTCAAACCAGACTGGGTAAGGATGAAAATGAGTTACTTGATGCTCTTAG AAGGATCTTAAATATCCAAGAGAAGGAATTTGGATATGAAAGTGAAGAGGTTTTGGTTACACTACAAAAAATTGTATACT ACTTGGATAAGCTAGGGAGAAAAAATGAAAAGCTACCTTTAGAGAGAAGGTTATCTGTGCTTAGGAAGAAGTTTAAGATG ATGGTTCCTCATAGTGGGAAATAA
Protein sequence (LotjaGi1g1v0287900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEASLLLPSHSVTGFRASKELPHVLSLRELKSIICFSVCNQKQSYNRKFYILPIRTVSGFCTSRSSVRSLEFSGTGPHSD AHSGFSAPNDNQRYSNFEKELEELFVEVKRMIKTGKKNDAIDLLNANYEVVKEQMNAGTKGIEEAAMLDILALGYMAVGD LKFVGSLLNLMKEVVDNLKDDAPHIDSILVHMGSLFVKLSEFEKSLNAYQRAVYIMEKTYGKDSTMLVTPRLGMAKALGS VGKATKAIEIYQHVISLLESSRGAESKDLVIPLLSLGNLLLKEGKANDAESHFTRVLNIYTKVYGQKDGRIGMAMSSLAQ VKCALGKSDEAVNLLKGALKVMKESNYMSPDDSIMEKMRVDLAELLHAAGRGQEGREVLEECLLITERSNGKDHPNLAVH MINLATSYSRSKNYAEAEHLLRRSLQIMVKHKGTDDQSISFPMLQLAVTLYHLKNDEEAEKLALEVLRIREKAFGDYSLP VGEALDCLVSIQTRLGKDENELLDALRRILNIQEKEFGYESEEVLVTLQKIVYYLDKLGRKNEKLPLERRLSVLRKKFKM MVPHSGK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 35 | 232 | 198 | 2.2E-8 | ||
| Coils | 94 | 114 | 21 | - | – | |
| SUPERFAMILY | 114 | 258 | 145 | 6.64E-9 | ||
| PANTHER | 143 | 525 | 383 | 1.0E-59 | – | |
| PANTHER | 143 | 525 | 383 | 1.0E-59 | – | |
| SMART | 186 | 219 | 34 | 34.0 | ||
| ProSiteProfiles | 186 | 219 | 34 | 9.116 | ||
| ProSiteProfiles | 186 | 345 | 160 | 12.393 | ||
| Pfam | 187 | 461 | 275 | 7.0E-17 | ||
| ProSiteProfiles | 228 | 261 | 34 | 5.487 | ||
| SMART | 228 | 261 | 34 | 75.0 | ||
| Gene3D | 233 | 389 | 157 | 4.5E-18 | ||
| SUPERFAMILY | 234 | 342 | 109 | 8.13E-13 | ||
| ProSiteProfiles | 270 | 303 | 34 | 6.726 | ||
| SMART | 270 | 303 | 34 | 11.0 | ||
| ProSiteProfiles | 312 | 345 | 34 | 5.812 | ||
| SMART | 312 | 345 | 34 | 96.0 | ||
| SUPERFAMILY | 360 | 496 | 137 | 9.83E-15 | ||
| Gene3D | 390 | 561 | 172 | 2.0E-27 | ||
| SMART | 398 | 431 | 34 | 10.0 | ||
| ProSiteProfiles | 398 | 431 | 34 | 6.402 | ||
| ProSiteProfiles | 398 | 431 | 34 | 7.138 | ||
| SMART | 440 | 473 | 34 | 110.0 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0287900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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