Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0293300 |
| Transcript ID | LotjaGi1g1v0293300.3 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Bifunctional fucokinase/fucose pyrophosphorylase; TAIR: AT1G01220.1 L-fucokinase/GDP-L-fucose pyrophosphorylase; Swiss-Prot: sp|Q9LNJ9|FKGP_ARATH Bifunctional fucokinase/fucose pyrophosphorylase; TrEMBL-Plants: tr|A0A151TY35|A0A151TY35_CAJCA L-fucose kinase; Found in the gene: LotjaGi1g1v0293300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:71151089..71156856) extracted from Lotus japonicus Gifu genome v1.2.
TACCATCTGAGACTATCTGTCCGTCACCCATCTAGGGTTCCGCCATCGTCCTCACCGCCGCTAGCCCCGAGCAAGCTCAC CTCTACACCGGGCCAAGCGCTTAGGTCGGATCGCCCCATCCACCGTCACCCTCAATGCCATTCACGCCCTCGCTCTCCGT TACCACACCACCGCCCAGGTACCCTTCATTTCCTATTTCTCAGAACTCAACCAAATCTATAACCATTTATTTACTTTCCT AACTTCACTGTTTTTACTACCAATGGCAGTGATGATTCTCTTCTTCTCCCAATGGCTAGCTTGCTGGCCAATAAGCATAT ACTGTTGTTCCATGCTGGAGGTGATTCTAAAAGAGTGCCTTGGGCTAATCCTATGGGGAAAGTGTTTCTTCCTCTTCCCT ACTTGGCATCAGATGAGCCTGATGGCCCAGTTCCCCTGCTCTTTCACCACATACTTGCCATTGCTTCTTGTGCAAGACAA GCATTTGGGGATCAAGGTTATTTTCTTCATATATGCATTCATTCAAGTCAATGTATTTTATTTCCTTTCCATATGTTGAC TTGGCATTACAAGATATCCAAGTTATATCAATTAAGTTTTACTCTCCACCACTGCTATTAGTTGTCTGCATTCATATATA ATGTGCATGTTTTAGGGAATTCTGTATATAGATCAGGGTTGTTAATTGCGGATAGCCTAGCGTAGCGGCAAGCCCAAAAA ACATTATTTCAAGCGCTATAGCGGTAAATAGCGGACAGTAGCAGTGGAGTAGCGGTGAACCCCCAGGGTGCTACGCTATA GCGCTATTGCGCCGCTATAGCACGCTGTTAACAACCCTGATATAGATATATATTCAACATGGCATTACTCATAAAAATTT AATTTAACCAAAAACTTAACAACATTATCATTGTTCTTTCTCAATGGGATTTATTTGCTGTCTTTTTCTCTGGGGTTACC TGCTGATGTTTGCACAAAAATTCCTTCAATCCTCTCAGGTGGAATGTTGACCATGACTGGTGATGTTCTACCATGTTTTG ACGCCTCTGTGATGATTCTTCCTAATGACACTTCGTGCATCATCACCGTTCCGATCACCCTTGATGTTGCTTCAAACCAT GGAGTTATTGTTGCAGCTGAAACTGAACGTTCAACTAAGAGTTATGCAGTCAGTTTAGTAGATAATCTCCTTCAGAAACC TACTTTAGAAGAGCTAGTTGAAAATAAGGCAGTTCTAGCTGATGGTAGAACACTTCTTGATACCGGAATAATAGCAGTTA GAGGTAAGGCATGGTTGGAGCTTGTTACACTTGCATGTTCCTGTCAGCCAATGATTTCAGAGCTCCTAGAAAGCAAAAAG GAGGTACACTACATTGTTTGGTTTTTATGGGTGGAAAAGAAATGAAATGAAAGTATTATATAATTAAATTCTTTGTTATG CTTTTGTATATAGGGAAAGAGAACAAATTGCTAAAACCAAGTTTATTTGATTTACAGAACATAATCATGAAGTTTATTTG TGCTTTACAAATTTTGTACATTGGCGATAGTTGTTAGTCAGTTTAAAATAAAACTATTTATTGATGTCAAGATTGTCATT TAATATAAAATAGATATATATTTTGATATTCTATGCAGGACTTAAAATATGGTGCAGCAGCTTCCATCCAAATCTGTCCA CTTATAGACAAAATGGATTTTTTTTTGGGGAAGGGGTATTTCATTTCCTCAGATTATAAAGTAACAGACAGAGAAAGATA GGTTGCTTTATGTTCATTGCACACAATTCCATTCAACCATACAAATCATGAATTTTATGTGTTATGAGTGCCATGCCAGT AATATCTTTGAGGAGCTTACTTTGAGTGCTCTCATAAGCCATGTTTAGTAAAGCATCTTTGTAAAATACACAATTGAACT GATATCATGAGACCTGTATTCGTCGTTTTAAGTAACAATCTTTATTATAATGGTAATATTGACTCAGTTAGGTCCTACTG CAGCTACTTTGGTTGACCTTGCATGTAATAAAAGATCACTTTTCTGATTTAACGAAACTTTATATATTTTGGTGTGTGCC CATATGCTGATATTTTGGTTATCCCACTTTTCCCTTCTTTCTCATTTGATTACTATTCATGTTGTTAATTTTTCTTCAAT TTGAGTGTAAATTTCAATTAACAAAAGAAATATTGTTATATAAATACCTACGAAGTCTGCCCATGTAAAATGCTCGTGTT CGTTTGAGGAACAATGAAAGTATTTTATCTAAGAATAAATGCTTTGTGCTGTGCAGATGAGTTTATATGAAGATCTGGTT GCTGCCTGGGTACCTGCAAAGCATGAATGGTTGAGAAAGCGCCCTTTGGGTGAAGAACTAGTTAATAAATTGGGAAAGCA GAAGATGTTCAGCTACTGTGCCTGTATGCCAAGCTCAATTTCAGTCTTCTATCTGTATCTGCAATTCTTCATCATTCCTA TATCTATCTGTACAAAGTAAAACATTGATTCGCTCATATATTATGCCATTGCAGATGATTTGTTGTTCTTACATTTTGGG ACCTCAAGTGAAGTGCTAGATCACCTCAGTGGTGCGGGTTCAGAATTGGTTGGTAGAAGACACCTGTGTTCTATTCCAGC TACAACTGCATCTGACATTACAGCATCTGCTATTATTCTTTCTAGTGAAATTGCACCTGGTGTCTCAATTGGGGAAGATT CTCTCATATATGATTCGTCTATTTCTGCCGGAATACATATTGGCTCCCTGTGTATAGTGGTTGGAGTCAACATCTCTCTA GATGACTATATAAGCACTGAAGATTCAATCAAGTTCATGCTTCCAGATCGCCATTGTCTTTGGGAGGTTCCCTTGGTTGG AAGTAGTGAGCGAGTTCTTGTATATTCTGGTCTTCATGATAACCCCAAAAGTTCTCTTTCTAAAGATGGTACGTTTTGTG GGAAGCCCTGGAAGAAAGTTTTACATGACTTAGGCATTCAAGAAAGTGACTTGTGGGGGTCCTCAGGCTCTCAAGAAAAG TGTTTATGGAATTCAAGAATATTCCCCATACTTCCTTATGCTCAAATGCTCAAGGTTGCGATGTGGCTGATGGGCTTAGC TAAACATAAAAGTGAATACTGGGGCATCAGTCTGGAGGAATTGCATAGATCAATTGATTTCTCCACAATGTGCATAGGTT CACGTAATCATCAAGCTGATCTCGCAGAAGGAATTGCAAAAGCTTGCATTAGGTATGGAATGCTGGGGCGCAATTTGTCT CAACTATGTGAAGAAATTCTTCAAAAGGAGGGTTCTGAAGTTGAAATATGTAAGGATTTCCTAGCTATGTGTCCAAAAGT TCGGGAGGAAAACTCTAATATACTTCCTGAGAGCAGGGCATACCAGGTGCAAGTTGATCTCCTTCGAGCTTGCAATGACG AAACAACAGCATGCGAGTTGGAGCACAAAGTTTGGGCTGCGGTGGCTGATGAAACTGCTTCAGCAGTAAGATATGGCTTT AAAGGTACATGCTTTAATCATGCTCATGTCCCAAGATGCCATCTTCATGAAAAATAATTGCAAACAGTTCATTGCTGCTG GCATTTTTTTTAAGGTGAAGCTGGGAGGATTCTTGCTACAGCTTTGGCTTTTGATGATTGAGTTTTGCTTGAGTTAGTAC TGAAAACATAAACATGGTTCATTTAAGGACTTGTGCTATAGCTTAAGATAACATCCATGATATTTTGCTTATTAGCATGA TAAGTACAAAACTAAAAACTACCTGTTGGCATCAAAATAGTGACCGAAAGTCTAATGTGTGGTGACTATTGAAAGAATTA ACTTTAAGGTTAAGCGATTGAGAGCCCAAGTTTTCTGAGAATATAAATTAGTGAGATATTGGAGATAGCAATTATAGCAT CTTTATGTGATTTATGGTGGTAGTATTAGTTTCTCATAGTATTATCTCTCTACAATCAACTCTCAAAATACAGACTTAGA GAAAGTGTTATCTACGATTAATGCCATTTAGAATTCATTTGACCTCAAGAGTGGTTACAACTAGCTATCTGAGTGTTTTG TTTTAAAATCTTACATATCACATCCATTCCTATATTTGAATGAATGGACAATTGCTTCTAAATATTCATGTGAAAAATTA GAGAACTGATTTTTCTGAATTCATTCTCTTTGTGTAGAACATTTATCAGAGACTCCCGGTAGCCTCTCATGTCAGGAGTA CCAAAGTAATGGGCGCACTCGTCAACCTTTCCATCCTAAAAGAGTAAAAGTAGAATTACCAGTTCGCGTAGATTTTGTTG GTGGTTGGAGTGATACCCCTCCATGGAGCATTGAACGTGCTGGATGTGTTCTCAACATGGCAATAAGCTTGGAAGGTTCT CTTCCAATTGGCACCATCGTAGAGACGACAGATACAACAGGAGTATTAATTACTGATGACACAGACAACCATTTATACAT TGAAGATTATAAATCTATATGTACACCATTCAATGGTGATGATCTATTTCGGCTGGTCAAATCCGCATTACTTGTGACTG GCATTATTCATGATAACATCCTTGCGGATATGGGCATGCACATTAAGACATGGGCCAATGTTCCTCGTGGTAGTGGATTG GGTACTTCTAGTATTTTAGCTGCATCAGTGGTGAAAGGGCTTCTTCAGATAATTGATGAGGATGATAGCACTGACAATGT TGCGAGACTTGTTTTGGTGTTAGAACAACTCATGGGGACAGGAGGTGGCTGGCAAGACCAAATTGGGGGTTTGTATCCAG GGATTAAATGTACTTCAAGCTTTCCCGGAATTCCATTGCGGCTTCAAGTGGTCCGGTCCCCCTGTTGGCTTCACCAGAGT TGATTTCTGAATTGCAGCAACGGCTTCTTGTGGTATTCACCGGTCAAGTAAGTATTTGTTTGTTCATATGAAAATGCATT TTGCGTTCCTCCATGCACCACCAATAATTGCCTAAAAGCTTGTAGTGTACGCTTTGGATCAACATGATTTTTCCTCATAA TCAATTTTACACCGCCACACACAAAAGTTTCTCCCCGTAATTGAATTTGGCTTTAGAATCAACTGTAATATTTCCAAACA TGCACAAGGACAGGAATTAAAGCTCCTGGGAAAAAGCTGAAATATTGGACAAATAGCAAAATTAGCAAGTTTCCAGATTA AAATTTCAGGAGATATGTTGTTCATGTTTTGTTTTGAATTTTTGTTTCTTTTTTAACATATATAATTACACATCTTATTT AAGGTTGTCATTTTGAAGCTAGTGTGGCCATTCACTTAATTCAACATCCTGTATTACTAACTTTGATTTTGGATTTACAT GGAATTGTTTTGCAGGTTCGGCTTGCAAAGAAGGTGCTGCAAAAGGTGGTAACTAGATATCTTCGGCGGGATAATCTGCT AGTATCGAGTATCAAGCGTCTTGTTGAGCTGGCAAAGATTGGGAGAGAAGCTTTGATGAACTGTGAGATTGATGAATTTG GGGAGATAATGTTGGAAGCTTGGAGATTGCATCAGGAACTTGACCCTTTCTGCAGTAATGAGTCTGTTGACCGGCTATTT TCTTTTGCTAGTCCTTACTGCTGTGGCTACAAGCTGGTTGGAGCTGGTGGTGGAGGCTTTGCTCTCTTACTTGCCAGAGA CAAACAGCTAGCCAAGGAACTTAGACACAGGCTAGAAGATGAGAAGCATTTTGAAGTGAAAATCTATGATTGGCAGGTAT CTCTATAA
CDS sequence (LotjaGi1g1v0293300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTAGCTTGCTGGCCAATAAGCATATACTGTTGTTCCATGCTGGAGGTGATTCTAAAAGAGTGCCTTGGGCTAATCC TATGGGGAAAGTGTTTCTTCCTCTTCCCTACTTGGCATCAGATGAGCCTGATGGCCCAGTTCCCCTGCTCTTTCACCACA TACTTGCCATTGCTTCTTGTGCAAGACAAGCATTTGGGGATCAAGGTGGAATGTTGACCATGACTGGTGATGTTCTACCA TGTTTTGACGCCTCTGTGATGATTCTTCCTAATGACACTTCGTGCATCATCACCGTTCCGATCACCCTTGATGTTGCTTC AAACCATGGAGTTATTGTTGCAGCTGAAACTGAACGTTCAACTAAGAGTTATGCAGTCAGTTTAGTAGATAATCTCCTTC AGAAACCTACTTTAGAAGAGCTAGTTGAAAATAAGGCAGTTCTAGCTGATGGTAGAACACTTCTTGATACCGGAATAATA GCAGTTAGAGGTAAGGCATGGTTGGAGCTTGTTACACTTGCATGTTCCTGTCAGCCAATGATTTCAGAGCTCCTAGAAAG CAAAAAGGAGATGAGTTTATATGAAGATCTGGTTGCTGCCTGGGTACCTGCAAAGCATGAATGGTTGAGAAAGCGCCCTT TGGGTGAAGAACTAGTTAATAAATTGGGAAAGCAGAAGATGTTCAGCTACTGTGCCTATGATTTGTTGTTCTTACATTTT GGGACCTCAAGTGAAGTGCTAGATCACCTCAGTGGTGCGGGTTCAGAATTGGTTGGTAGAAGACACCTGTGTTCTATTCC AGCTACAACTGCATCTGACATTACAGCATCTGCTATTATTCTTTCTAGTGAAATTGCACCTGGTGTCTCAATTGGGGAAG ATTCTCTCATATATGATTCGTCTATTTCTGCCGGAATACATATTGGCTCCCTGTGTATAGTGGTTGGAGTCAACATCTCT CTAGATGACTATATAAGCACTGAAGATTCAATCAAGTTCATGCTTCCAGATCGCCATTGTCTTTGGGAGGTTCCCTTGGT TGGAAGTAGTGAGCGAGTTCTTGTATATTCTGGTCTTCATGATAACCCCAAAAGTTCTCTTTCTAAAGATGGTACGTTTT GTGGGAAGCCCTGGAAGAAAGTTTTACATGACTTAGGCATTCAAGAAAGTGACTTGTGGGGGTCCTCAGGCTCTCAAGAA AAGTGTTTATGGAATTCAAGAATATTCCCCATACTTCCTTATGCTCAAATGCTCAAGGTTGCGATGTGGCTGATGGGCTT AGCTAAACATAAAAGTGAATACTGGGGCATCAGTCTGGAGGAATTGCATAGATCAATTGATTTCTCCACAATGTGCATAG GTTCACGTAATCATCAAGCTGATCTCGCAGAAGGAATTGCAAAAGCTTGCATTAGGTATGGAATGCTGGGGCGCAATTTG TCTCAACTATGTGAAGAAATTCTTCAAAAGGAGGGTTCTGAAGTTGAAATATGTAAGGATTTCCTAGCTATGTGTCCAAA AGTTCGGGAGGAAAACTCTAATATACTTCCTGAGAGCAGGGCATACCAGGTGCAAGTTGATCTCCTTCGAGCTTGCAATG ACGAAACAACAGCATGCGAGTTGGAGCACAAAGTTTGGGCTGCGGTGGCTGATGAAACTGCTTCAGCAGTAAGATATGGC TTTAAAGAACATTTATCAGAGACTCCCGGTAGCCTCTCATGTCAGGAGTACCAAAGTAATGGGCGCACTCGTCAACCTTT CCATCCTAAAAGAGTAAAAGTAGAATTACCAGTTCGCGTAGATTTTGTTGGTGGTTGGAGTGATACCCCTCCATGGAGCA TTGAACGTGCTGGATGTGTTCTCAACATGGCAATAAGCTTGGAAGGTTCTCTTCCAATTGGCACCATCGTAGAGACGACA GATACAACAGGAGTATTAATTACTGATGACACAGACAACCATTTATACATTGAAGATTATAAATCTATATGTACACCATT CAATGGTGATGATCTATTTCGGCTGGTCAAATCCGCATTACTTGTGACTGGCATTATTCATGATAACATCCTTGCGGATA TGGGCATGCACATTAAGACATGGGCCAATGTTCCTCGTGGTAGTGGATTGGGTACTTCTAGTATTTTAGCTGCATCAGTG GTGAAAGGGCTTCTTCAGATAATTGATGAGGATGATAGCACTGACAATGTTGCGAGACTTGTTTTGGTGTTAGAACAACT CATGGGGACAGGAGGTGGCTGGCAAGACCAAATTGGGGGTTTGTATCCAGGGATTAAATGTACTTCAAGCTTTCCCGGAA TTCCATTGCGGCTTCAAGTGGTCCGGTCCCCCTGTTGGCTTCACCAGAGTTGA
Protein sequence (LotjaGi1g1v0293300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASLLANKHILLFHAGGDSKRVPWANPMGKVFLPLPYLASDEPDGPVPLLFHHILAIASCARQAFGDQGGMLTMTGDVLP CFDASVMILPNDTSCIITVPITLDVASNHGVIVAAETERSTKSYAVSLVDNLLQKPTLEELVENKAVLADGRTLLDTGII AVRGKAWLELVTLACSCQPMISELLESKKEMSLYEDLVAAWVPAKHEWLRKRPLGEELVNKLGKQKMFSYCAYDLLFLHF GTSSEVLDHLSGAGSELVGRRHLCSIPATTASDITASAIILSSEIAPGVSIGEDSLIYDSSISAGIHIGSLCIVVGVNIS LDDYISTEDSIKFMLPDRHCLWEVPLVGSSERVLVYSGLHDNPKSSLSKDGTFCGKPWKKVLHDLGIQESDLWGSSGSQE KCLWNSRIFPILPYAQMLKVAMWLMGLAKHKSEYWGISLEELHRSIDFSTMCIGSRNHQADLAEGIAKACIRYGMLGRNL SQLCEEILQKEGSEVEICKDFLAMCPKVREENSNILPESRAYQVQVDLLRACNDETTACELEHKVWAAVADETASAVRYG FKEHLSETPGSLSCQEYQSNGRTRQPFHPKRVKVELPVRVDFVGGWSDTPPWSIERAGCVLNMAISLEGSLPIGTIVETT DTTGVLITDDTDNHLYIEDYKSICTPFNGDDLFRLVKSALLVTGIIHDNILADMGMHIKTWANVPRGSGLGTSSILAASV VKGLLQIIDEDDSTDNVARLVLVLEQLMGTGGGWQDQIGGLYPGIKCTSSFPGIPLRLQVVRSPCWLHQS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 782 | 780 | 1.0E-245 | – | |
| Pfam | 15 | 412 | 398 | 1.3E-115 | ||
| SUPERFAMILY | 590 | 773 | 184 | 2.13E-22 | ||
| Gene3D | 591 | 789 | 199 | 2.1E-43 | – | |
| Pfam | 697 | 759 | 63 | 3.7E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Molecular function | Transferase activity, transferring phosphorus-containing groups | Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi1g1v0293300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…