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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0301200 |
| Transcript ID | LotjaGi1g1v0301200.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcium-binding endonuclease/exonuclease/phosphatase family; TAIR: AT5G54130.2 Calcium-binding endonuclease/exonuclease/phosphatase family; Swiss-Prot: sp|O81916|YC22_ARATH Uncharacterized calcium-binding protein At1g02270; TrEMBL-Plants: tr|I1KB30|I1KB30_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0301200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:73477158..73482054) extracted from Lotus japonicus Gifu genome v1.2.
GGGAAACAACGTTTGCTATTATCGGCGTTCGTTGTGTCTCTCTGTCTCATCTCATCATCATTCAACAACGTTCCCTCCAA CACGTTCATTCTTCATTCTTCCTCCTTCCTTCAAACCCTTTCTTTCACCCACTTTGCATTTCAATTCTAATTCATCAAAA TTGCTGTTACTTTCCACAAAGTAAGTTAAATTTTCAAACACATTGTGATTGTGATGATAGAATCAAGAACCCACTACAAC TGTTTCTATAGAAAGATTTAAATAAAACTTGCTTTTTCTTCAACAGGGTATTCATTCATTCATTGCTTTTATGCGGGATC ACGCGAATAATAATAATATACCATTATTATTATTATTATTATTCTTCTTTTATTGTTGTCTTCATCATCACCATCATTGA TATTTATAGAGGCATTAGCATTGGTGGGTTTGGACGTAGAATGGGAACGGCAAGGTGGGCTAAGAGGATGGGAAGGATTT CAAGGATTGGCAGTTTTGCAATTGCTTCTTCCATTAATGATAACCAGCAACAACCTTGCATTACCTGCACTACTTTTAAT ATTCTTGCTCCTATTTACAAGCGAATTGACCATGAGGTTTGTTTTTTTGTTTTAATCATTTTTAACCTTCTATTTTTGCA TAGTGAGGTGTGTTTTTCAAAAGGGTAGTCTCAAGTTTTGTGCTTTTTGTGTTTTGTTGATTAAAACAGGACCCTAGTTG CCGCGAGAGCGATTGTAAAGCGTATTGGATGGCCAGGAATCATAGGATTTTGGATTGGTTGTTGAATGAGAGATCTTCTA TTATCTGTCTTCAGGTTTGTGTGTTGGTTTCTTTTCATGGTTATCAGCTTCATGACATATTTTGTCATAACTCTTTGCAT TTGTTCCCTCTATTTTGTTTGTGCTTGAAAATTGAAATTGATTGGAGTGGCATGTGAGATTCTATAATGGGCCAGAGGCT AATATGTGTTGGGTTTGCGCAGGAGTTTTGGGTTGGAAACGAAGAGCTTGTTAATTTGTATGAGAAGAGGCTTGGCGATG CTGGCTATGTTAGTTTCAAGCTTGGAAGGACCAACAACCGTGGGGATGGTATGCACAATATTCTCTCTCAATTGGAAAAT ATCCCTTTGGATTTTCATCACTTTAGTATTGCAAATAAATGTCAATTGGTAATTACCAATTTTTTTCATGGTACTGTGAG GATTTGCAATGTGATGAACTGATTTATTGAAATTGGCAAACAGGAACACCACATGGCAAGTTTAGGAAATATTTACTGCG GGAAGGGAACAACATTGAGGAAAAATATCTTCTGTTTTAAATTTTCTTGCGAATAGAACTCTTGTGAACGGAAGTTTCAG TCAGTTAGATGCTAGTCGGACACTTTAGAGGGTTTGGTTTGTGAGAGATTCACTTTAGAGGGTAAATAGTGAAATAGTAA TGGTTGAAATTTTAATAAAATACATATTACATAAACATATACAGCTGTTAAAATCTACTCATTGGATGTAAGTTGTAGTA ACTCTGCACTTGTACTCACTTTTGGCAGGAGAAGCCCTGTTCTACATATGCATAGTTTTGCTCTGAAATTTCTTCTTGAA GATTTATGCACAAAATACAAATTCTTACATGTAGTGTTTCTACAGGTCTTCTGATAGCTGTGCAAAAGGAATACTTCAAT ATTCTTAATTATAAGGAGCTGCATTTCAATGACTGTGGTGATCGTGTAGCTCAGCTGTTACATGTTGAACTGGCTTTTCC ATTTTCACAGTGGCGAAGCAGTGAAATTAGGCAGGAAATTCTGATTGTTAACACTCACCTGCTATTTCCCCATGATTCTA CTCTAGCCCTTGTACGACTGAACCAGGTATCTAAGCATTTAAATGTCACATCCAAACACTTGCCAATTATTAGATTTGGT GTCTCATTAGACTGACACACCTTAAAATTTTATTTTCTTTAGGTCTACAAGATTCTTCAATATGTAGAGTCGTATCAGAA TGATTTCCAACTCAAGCCAATGCCAATCATGCTATGCGGGTAAATTCCAAATGTACTTCCACGCACTTTTTTTGTTTTTT GTTTTTATCTAAAACTCTTGAATTGTGTTTTATTTACAAGTTTTTATTTCTCAGTGACTGGAATGGAAGCAAACGTGGAC ATGTTTACAAGTTCCTGAGGTCTCAGGGTTTTGTATCATCTTATGATACTGCACATCAGTACACTGATGCAGAAGCTGAC AAGGTATTTAGTTATTTACCATTGCCTTCAAAAAAATTATGCTTGACAATATGCCAATCACTCAGATTTATTTAACATCA TTTCAATGCAGTGGGTTAGTCACCGCAATCATCGGGGAAATATATGTGCTGTTGATTTTATTTGGCTTCTGAATCCGGAC AAGTATCGAAAACTGCTCAAAGCAAGTTGGAGTGAAGCAGTGTTTGGCATGTTCAAGGTAATCATGTAACATTTGGACCC AGACTCAGTTTATTAAGCATATTAGTTTTACCATCTTTGCAGGGAGTCATGTATACCTTCAAACCAAATATGTTTCATAT ATATTCAACATTACTTTCCTTATAGCAATAGGGAAATAACTCTGAAGTTAATAAGGCAAACACTTCAATGTTGGACAAGG ATCCTGATTCAAGTTGTCTCCTAAAACTTTGATACACCTGATTGATGTATTCGATAAACGTATCACTAGAAGATAGTTTC AAGTGCAGTATTTGTATAATCTTGTGGAAGACCGCAATTAGATATAGTTTACGAGTGAGGAATCAGTATTGCTTACACTT ATTATGTCAGGGAGGAGATTATTTATGGGTTTTGTTAATATTTCTTGTTCTCGTATATTGACATTATTACTATTTGTCTA GTGTTTTATTTTAGCCTACCACTAATATGAATTCAGAAAAGGTGAAAGTTTACCAAGTGAAAACCAGCATTATTCTATTC ATTTGCGGAGCTGAATTTTCCTTAACAAAATTTTTTTCCATTTTCAGTATCTATTGCGGAGAGCTTCACTGACAGAGAGT GATGCATTTGCTTTTCTAAAGGGCGATAATGAAGATTGTATTACTTATGCTGGTTTCTGTGAAGCACTTCGAGAGGTATG GACACTCTAAAAGTTCAGTTAATGCATGTGCTTGTCTGAGAAATCCAAGTGGTTATAAGTTATTTTCATTCTGTGCAGCT CAATTTAACAGGTCATTGCCATGGGTTATGTGAGCAAGAGATTAAAGACTTGTGGGTCCAAGCAGACATAGATGGAAATG GTGTTCTTGATTACAAAGAATTTCTGGTAAAGTATTTCACATGACATGATATCTTATAGAAATATCATACAAGAAAAGAC TTTTTCCAGTAAAAAATCATATTTATGCAACCAATGACTAGAGGTTGAGTGTGAGCCTGAAATCTAAGGGTGTGTTTGTG AGTTGATTTTTGGAGGGGAGGGGAGGGAATGGAAGGGGGAGACTTATGAGAAGCCCTCCCCTTGTTTGGGAGATTTTAAA ATGGGGGGAAGGGTTTGGGCCTTGGGGCTATTTCTAAAAACCCTCCAAAACAATCTTGTTGTTCCCCCAAATTGGGGGGT TTTGGGGAATTTGGAACTTCCAAATAAGGGAAGAGCTTACCCCCTTCCCTTTCTCTTGCTCTCCCCCGCCCCCTCGTAAA AACTCACAAACAAAGGGGTTTATAGTAATGCACTGACAGCATGTTATATGTAATTTGCCTATATGATAATCTGTATCTTA GTTTCTGTGTACATAAACATACAAATTAAGGAGTTCTATCAGGTCAGGTTCATAGAACATTTTGTCAGTAGTGAGAGATC CAACAAGTACAATTAACCCGTATAGGTATATTAAAGAAGAAAATGTCATTAAGTCCAGCAAATTAGTAAAACTCTTTTGT GTTGAGTGGATGCTGAAGTTCCTTTTTTATTTTTGGTTTGTACATTAGCTTAGTTAGATGCATGTAGGTAACATCACCTA GTGAGATAAGCTTGCCTATTTCTGTTTTATAGTGGGCTATGAAATTCAAATTTTTTAATTTTCTGCTTTATTCCGAGTTT ATTGGCTAAATCAAGGTTTTGATATCATGCCGTTGCAGCAGCAAATCTGGAATTCAGCAGTTTCAGATCAGAGAGATGAC AACAAGAACGCGGAACATTATGATGTTCAGGAACAAACAATTGGTTTCAGTGTAAAAAATGCGGTGTTGTTCCCTCCGGA GGTGGAGAAAGGTAGATGGCCTGAAGACTACTCCCTATCGGATCACGCGCGACTCACTGTAGTGTTCTCACCAATAAGAA TGCCATGCTCCCAGTTGATTTGCTAACAATGCTTGTGGAGCACTCTAGCTTAGGATTTAGAATTAAGATTTCTGTACATA ACATGCCACACAGTTAGGAATGGGTGAAGCAGTGGAACCGAGTGAGGAAAAGGAACTTGGAGTTCTTTTCTGGATAAGGT TTTAACCAACTGTGTTGTGATCACTGCGTTATCATTGGCCTCACACTCTCGATAAGGCATAGCTAGCACAAGCAAAATGA AGTTAATATTTATGCAGTGAGCAACACTATCATCAAGTAATTTGTTTTCCCCATTTTTTCTGCTCTGTATAGTTGTTTTT TATTTATAGGTCATAGGCATCAACCTTTTTGTAGCTTGGTAAGATGCACCCTCTAGCTAGAGCTATTCTTGAAGTAGAGA AGAGTTCAGACACACTTGTAACATATTTTGCTCTTGATAGAGTTGTGACTAACTCAAATTGTACATAGCTTTGATAAACT AGTTTCTCTTTGGAACTCAGGGGTGTTGGATTGGAACTCCACAGAAAATAGTTATGTGATCAAAGCATAATCCACCATTG CTGCAACAAAATATTAT
CDS sequence (LotjaGi1g1v0301200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAACGGCAAGGTGGGCTAAGAGGATGGGAAGGATTTCAAGGATTGGCAGTTTTGCAATTGCTTCTTCCATTAATGA TAACCAGCAACAACCTTGCATTACCTGCACTACTTTTAATATTCTTGCTCCTATTTACAAGCGAATTGACCATGAGGACC CTAGTTGCCGCGAGAGCGATTGTAAAGCGTATTGGATGGCCAGGAATCATAGGATTTTGGATTGGTTGTTGAATGAGAGA TCTTCTATTATCTGTCTTCAGGAGTTTTGGGTTGGAAACGAAGAGCTTGTTAATTTGTATGAGAAGAGGCTTGGCGATGC TGGCTATGTTAGTTTCAAGCTTGGAAGGACCAACAACCGTGGGGATGGTCTTCTGATAGCTGTGCAAAAGGAATACTTCA ATATTCTTAATTATAAGGAGCTGCATTTCAATGACTGTGGTGATCGTGTAGCTCAGCTGTTACATGTTGAACTGGCTTTT CCATTTTCACAGTGGCGAAGCAGTGAAATTAGGCAGGAAATTCTGATTGTTAACACTCACCTGCTATTTCCCCATGATTC TACTCTAGCCCTTGTACGACTGAACCAGGTCTACAAGATTCTTCAATATGTAGAGTCGTATCAGAATGATTTCCAACTCA AGCCAATGCCAATCATGCTATGCGGTGACTGGAATGGAAGCAAACGTGGACATGTTTACAAGTTCCTGAGGTCTCAGGGT TTTGTATCATCTTATGATACTGCACATCAGTACACTGATGCAGAAGCTGACAAGTGGGTTAGTCACCGCAATCATCGGGG AAATATATGTGCTGTTGATTTTATTTGGCTTCTGAATCCGGACAAGTATCGAAAACTGCTCAAAGCAAGTTGGAGTGAAG CAGTGTTTGGCATGTTCAAGTATCTATTGCGGAGAGCTTCACTGACAGAGAGTGATGCATTTGCTTTTCTAAAGGGCGAT AATGAAGATTGTATTACTTATGCTGGTTTCTGTGAAGCACTTCGAGAGCTCAATTTAACAGGTCATTGCCATGGGTTATG TGAGCAAGAGATTAAAGACTTGTGGGTCCAAGCAGACATAGATGGAAATGGTGTTCTTGATTACAAAGAATTTCTGCAGC AAATCTGGAATTCAGCAGTTTCAGATCAGAGAGATGACAACAAGAACGCGGAACATTATGATGTTCAGGAACAAACAATT GGTTTCAGTGTAAAAAATGCGGTGTTGTTCCCTCCGGAGGTGGAGAAAGGTAGATGGCCTGAAGACTACTCCCTATCGGA TCACGCGCGACTCACTGTAGTGTTCTCACCAATAAGAATGCCATGCTCCCAGTTGATTTGCTAA
Protein sequence (LotjaGi1g1v0301200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGTARWAKRMGRISRIGSFAIASSINDNQQQPCITCTTFNILAPIYKRIDHEDPSCRESDCKAYWMARNHRILDWLLNER SSIICLQEFWVGNEELVNLYEKRLGDAGYVSFKLGRTNNRGDGLLIAVQKEYFNILNYKELHFNDCGDRVAQLLHVELAF PFSQWRSSEIRQEILIVNTHLLFPHDSTLALVRLNQVYKILQYVESYQNDFQLKPMPIMLCGDWNGSKRGHVYKFLRSQG FVSSYDTAHQYTDAEADKWVSHRNHRGNICAVDFIWLLNPDKYRKLLKASWSEAVFGMFKYLLRRASLTESDAFAFLKGD NEDCITYAGFCEALRELNLTGHCHGLCEQEIKDLWVQADIDGNGVLDYKEFLQQIWNSAVSDQRDDNKNAEHYDVQEQTI GFSVKNAVLFPPEVEKGRWPEDYSLSDHARLTVVFSPIRMPCSQLIC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 11 | 443 | 433 | 1.6E-204 | – | |
| PANTHER | 11 | 443 | 433 | 1.6E-204 | – | |
| Gene3D | 18 | 440 | 423 | 3.6E-36 | ||
| SUPERFAMILY | 27 | 247 | 221 | 2.09E-26 | ||
| Pfam | 38 | 245 | 208 | 1.2E-11 | ||
| SUPERFAMILY | 262 | 378 | 117 | 3.32E-10 | ||
| ProSiteProfiles | 346 | 381 | 36 | 8.6 | ||
| ProSitePatterns | 359 | 371 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of LotjaGi1g1v0301200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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