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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0327000 |
| Transcript ID | LotjaGi1g1v0327000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | magnesium transporter NIPA (DUF803); TAIR: AT4G38730.1 magnesium transporter, putative (DUF803); Swiss-Prot: sp|Q8GYS1|NIPA7_ARATH Probable magnesium transporter NIPA7; TrEMBL-Plants: tr|I1KBR6|I1KBR6_SOYBN Probable magnesium transporter; Found in the gene: LotjaGi1g1v0327000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:78082771..78086182) extracted from Lotus japonicus Gifu genome v1.2.
ATGTACTCAAGCAATTTGATCGGGTTCGTGTTAGCTCTTGTCTCCGGCGCTTTCATCGGCTCCAGCTTCATCATCAAGAA AAAGGGTCTCCAACGCGCCGCCACCCTCAGCGGCTCTCGCGCCAGTGGTGGTGGCTATGGTTATCTCCTTCAACCTCTTT GGTGGCTTGGAATGGTTACTAGTAAGAACTAAGAACCTACCCATCTACCTAACTTTCTTTATCTTTCATTCTTTCAGCAT TTTCCCATTTTTGGTCTCTGATTTTGACTCTGGTTTCCCTTTTTCACAGTGATTGTTGGCGAGATTGCGAATTTTGTTGC CTACATTTATGCCCCTGCGGTGCTTGTTACTCCACTTGGTGCTTTGAGTATTATTGTTAGGTGAAAATGTTCTTCTTTTT TGGGCCCCCAATTTCAATTTTGCTTTTTGGATTTTAAAAGTTTGATTTTTGAGCTGATTCTGCTTCTGGGTATGTATGGC TAGTGCTGTCCTGGCACATTTCATGTTGGGGGAGAAGCTGCAGAAGATGGGTATGCTAGGGTGTCTTCTCTGTATAGTGG GGTCCACTATGATTGTGCTCCATGCGCCTCAGGAAAAGTCTCTCAGTTCTGTGCTGGAAATATGGCAATTGGCTGTTCAA CCAGGTAAGCTTGTTGTTGTATGTATCATTGTTGATTTAGGCTGTGTTTGGATTCAAACTGAGATCAACTTGAAAGCACA TTTATGATTTAACCCAATGAAAGTAAATAGTTCCTTTCACTCTTGCTGCATTGGAATTAATGTGTTTTCGTTCAAGTTAT CTGGTAAAACTATGGTTTGGTTTTCGGTTCACATGTGTTGCGAGACAATTTCTACAGAAAAACACGAATTCTAAGGGAGC TGAAAGGAACTCACTGTTTCCGTTGGCTTGGAAGTGCTTTCTAAATCTCAACTGAAATCTAAATACACCCTTATTTGTTT ATTTCTGCTGATGTTTCTGCTTTCTGTTTTGGTATCCAGCATTTCTTATGTACACAGCTTCAGCAATGGCTGTAACATTC TTTCTGATTTTGTATTGTGCTCCCCGCTATGGCCAGACTAATATTTTTGTGTATATTGGAATATGCTCCATAATTGGATC CTTAACTGTAAGTGACTCTTTCCTTCCCGGTTCACCACAACAGATGACAAAGTTCAACGCCACAGGTTACACTTCTAATA AGATATCTTGTTTCTCAGGTCATGAGTGTAAAAGCAATTGGCATTGCTATAAAACTTACATTGGATGGTGCAAACCAGTT TTTCTACATTCCGACATGGATTTTCACAACGGTTGCTATTTCCTGCATCATTACTCAATTAAATTACCTTAATATGGTCA GTAACACTCTTGACTTTTTATGTAAAGTTGCTTTTTGGTATATGACATAAAAGAAATTAGAGCCTTAATTTATCTTCCCT TTAGAAGAATAATATAACCTTTACAATGCTGGCTTTCAATTATGTTTGTCATCTGCTTGTATTTAGTATGAAGAAGCATT TTTGTTTGCTAGAGGTGATCATACATTTGTATTTTTCTAGGCTTCTTGATCCCTTTCTTTTTCTTTGGTCGCGCGCCTAT TACTAACATTTGTCTGTGGAAGTTTTCATCCCATATCAATTAAAGTAACTTTCAGTAGTCTTTGAGATAATCTATAAGTT AAATATGTAAGTTTCTAGTCCAAATAACATCCATGTAATGCTTGACCTGGACCCTCTCCCCCCCCCCCCCCCTAAACTGA TAATCTTGAAGTCCTGACTCCTGAATTTTATTTACAAAGATCGTTGATTACTTGCCTTTCAGTTGTCGTCTCATTGTTTG CTAATTAGTTGGTCTTCAATCTGGGCTTTTATGGTGATCAAATTTGCATGATTGCAGGCTCTGGATATTTTCAACACAGC AGTTGTTTCTCCTATCTATTATGCCTTGTTCACATCTTTTACAATATTAGCTAGCGCAATCATGTTTAAGGTTGGTATTT TACTGAAACAAATGAGAAACGCTACTAAGGAAGCACCTCATGCATCAAGTGCTCAATTATCTGTTGTAATCCCACCTCCT CTACCTTTCTTATTTAGGATTATTCTGGTCAAAGTATAAGCAATATTGCATCAGAGCTTTGTGGCTTCATCACTGTTTTA TCTGGAACAGCCGTACTGCACAGTACAAGAGAACCAGATCCTCCAGACAGTACAGGTAATTCCTCATGCACTTAGGTGAG GGTAGCTTTGATGATATAAGGACTCCTCTATGTGCCCCTGTGTTAAGCTGCAATCAAAAACTTTATTAGTATCGGGTAAC TTGAACTGTTCTACTGTCTGATACTATAATTACACCCAAGGCTAAAACTCAATACAAACTTTAGATAATATGAAAAAGAT GCTCATTACTTTAGATATATTGTATTGAAATTCAAATTTTTATTTGAATAAGTGGGACAACAATAATCGAACTCTAAAAC TACTTAGGCATAGAGGCTTTGATATCATGTCATGAATTAACTATTGCAGAAGTTTAAACTTTTGGGTGAAGACACGGGAA TGGTTTTATATTTTATTTCTAATTACTAATTTCTAAAACTGAACCCTGGCGTAACATCTGTTAGCCTCTTTTTCCTGCCA AAACACTTAAAATCAGGACGAACTGCTCCATCATGAAAGGAGATGCCTAGCCTTTGCAAATTAATTAATTTATTTGTAGT ACATATGCATTAAACTAAGGTCTTTCCCTGTATGGGCTGTTTAGCAGAACTGCAGAAATATACTCTACCATTTAAGCGAC AACTATCCAGATGCAGATATGGAACCTTCAATGGTTCTTAGCAAGTTTTGAGAAGTTAACTGTTCAATAATAATAGATAT ATCATTTTCTTCTGATTGATTAAAAATGAAGAAATAGGATAATTGATTTGTAAGCCTCATGCCATAAGATTTTTCCAATT TCACTCTAAGCACTTATGAGACATTTTCCATAAAGCACTTGGAGCTCCAAATTATAGTTCACATATATGAATATACACCT ATGTCATGGCTAATCTGTTCTGGTGGAGAATTAAGGGACATTCAAAGAGAAAAGTTAAAAAAAAAATGTTTGGCTAGAGG CCTAGAGGGCATATAGTCAACATTCAGGACAGACTTGGATTTCTTAGCATAATAAGACAGTGCGATTGAAGTTTTTTTGT TATTACTAGTTATGTTTAAGTTGAGAGGCTAATGCTGTTTCCAAAAGTGCAAGAAATTTCCTAATTATTCATCGCATGCA GATCTTTACAGTCCCTTGTCTCCAAAAGTATCATGGTACATCCAAGGCAATGGCGAAACTTGGAAACAGAAGGAGGAAGA TGAACAACCCTTCAGTTTAATCACAGTTATTCGGCAAGACCATTTCAAGTGA
CDS sequence (LotjaGi1g1v0327000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTACTCAAGCAATTTGATCGGGTTCGTGTTAGCTCTTGTCTCCGGCGCTTTCATCGGCTCCAGCTTCATCATCAAGAA AAAGGGTCTCCAACGCGCCGCCACCCTCAGCGGCTCTCGCGCCAGTGGTGGTGGCTATGGTTATCTCCTTCAACCTCTTT GGTGGCTTGGAATGGTTACTATGATTGTTGGCGAGATTGCGAATTTTGTTGCCTACATTTATGCCCCTGCGGTGCTTGTT ACTCCACTTGGTGCTTTGAGTATTATTGTTAGTGCTGTCCTGGCACATTTCATGTTGGGGGAGAAGCTGCAGAAGATGGG TATGCTAGGGTGTCTTCTCTGTATAGTGGGGTCCACTATGATTGTGCTCCATGCGCCTCAGGAAAAGTCTCTCAGTTCTG TGCTGGAAATATGGCAATTGGCTGTTCAACCAGGTAAGCTTGTTGTTGTATCATTTCTTATGTACACAGCTTCAGCAATG GCTGTAACATTCTTTCTGATTTTGTATTGTGCTCCCCGCTATGGCCAGACTAATATTTTTGTGTATATTGGAATATGCTC CATAATTGGATCCTTAACTGTCATGAGTGTAAAAGCAATTGGCATTGCTATAAAACTTACATTGGATGGTGCAAACCAGT TTTTCTACATTCCGACATGGATTTTCACAACGGTTGCTATTTCCTGCATCATTACTCAATTAAATTACCTTAATATGGCT CTGGATATTTTCAACACAGCAGTTGTTTCTCCTATCTATTATGCCTTGTTCACATCTTTTACAATATTAGCTAGCGCAAT CATGTTTAAGGATTATTCTGGTCAAAGTATAAGCAATATTGCATCAGAGCTTTGTGGCTTCATCACTGTTTTATCTGGAA CAGCCGTACTGCACAGTACAAGAGAACCAGATCCTCCAGACAGTACAGATCTTTACAGTCCCTTGTCTCCAAAAGTATCA TGGTACATCCAAGGCAATGGCGAAACTTGGAAACAGAAGGAGGAAGATGAACAACCCTTCAGTTTAATCACAGTTATTCG GCAAGACCATTTCAAGTGA
Protein sequence (LotjaGi1g1v0327000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYSSNLIGFVLALVSGAFIGSSFIIKKKGLQRAATLSGSRASGGGYGYLLQPLWWLGMVTMIVGEIANFVAYIYAPAVLV TPLGALSIIVSAVLAHFMLGEKLQKMGMLGCLLCIVGSTMIVLHAPQEKSLSSVLEIWQLAVQPGKLVVVSFLMYTASAM AVTFFLILYCAPRYGQTNIFVYIGICSIIGSLTVMSVKAIGIAIKLTLDGANQFFYIPTWIFTTVAISCIITQLNYLNMA LDIFNTAVVSPIYYALFTSFTILASAIMFKDYSGQSISNIASELCGFITVLSGTAVLHSTREPDPPDSTDLYSPLSPKVS WYIQGNGETWKQKEEDEQPFSLITVIRQDHFK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 342 | 342 | 6.0E-211 | ||
| PANTHER | 1 | 342 | 342 | 6.0E-211 | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| Pfam | 5 | 302 | 298 | 5.0E-121 | ||
| Phobius | 6 | 25 | 20 | - | – | |
| TMHMM | 6 | 25 | 20 | - | – | |
| Phobius | 26 | 45 | 20 | - | – | |
| TMHMM | 45 | 67 | 23 | - | – | |
| Phobius | 46 | 67 | 22 | - | – | |
| SUPERFAMILY | 51 | 125 | 75 | 7.32E-10 | – | |
| Phobius | 68 | 72 | 5 | - | – | |
| Phobius | 73 | 95 | 23 | - | – | |
| TMHMM | 77 | 99 | 23 | - | – | |
| Phobius | 96 | 106 | 11 | - | – | |
| TMHMM | 106 | 125 | 20 | - | – | |
| Phobius | 107 | 127 | 21 | - | – | |
| Phobius | 128 | 146 | 19 | - | – | |
| TMHMM | 147 | 169 | 23 | - | – | |
| Phobius | 147 | 168 | 22 | - | – | |
| Phobius | 169 | 179 | 11 | - | – | |
| Phobius | 180 | 204 | 25 | - | – | |
| TMHMM | 182 | 204 | 23 | - | – | |
| Phobius | 205 | 215 | 11 | - | – | |
| TMHMM | 214 | 236 | 23 | - | – | |
| Phobius | 216 | 236 | 21 | - | – | |
| Phobius | 237 | 247 | 11 | - | – | |
| TMHMM | 243 | 265 | 23 | - | – | |
| Phobius | 248 | 269 | 22 | - | – | |
| Phobius | 270 | 352 | 83 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Magnesium ion transmembrane transporter activity | Enables the transfer of magnesium (Mg) ions from one side of a membrane to the other. | ||
| Biological process | Magnesium ion transport | The directed movement of magnesium (Mg) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi1g1v0327000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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