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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0330000 |
| Transcript ID | LotjaGi1g1v0330000.4 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | protein kinase family protein; TAIR: AT1G35670.1 calcium-dependent protein kinase 2; Swiss-Prot: sp|P28583|CDPK_SOYBN Calcium-dependent protein kinase SK5; TrEMBL-Plants: tr|A0A151TR47|A0A151TR47_CAJCA Calcium-dependent protein kinase SK5; Found in the gene: LotjaGi1g1v0330000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:78588626..78592601) extracted from Lotus japonicus Gifu genome v1.2.
GCAACAATGTCCAAACCCACCACCACAGCACCACCAAAACCCACGACGGTCCTCCCCTACCTCACCGAAAACATCCGTGA AGTCTACACCTTCGGAAGAAAGCTCGGCCAGGGTCAATTCGGCACCACATATCTCTGCAGACACAACTCCACAGGCTGCA CCTTCGCCTGCAAGTCAATCCCGAAGCGGAAGCTGCTCTGCAAGGAGGATTACGATGATGTTTGGAGGGAGATTCAGATA ATGCACCACCTATCGGAGCACCCACACGTTGTCAGGATCCATGGGACTTACGAGGATGCTGCTTCTGTTCACATCGTTAT GGAAATCTGTGAAGGGGGTGAGCTTTTTGATAGGATCGTGCAGAAGGGGCAATACAGTGAGAGAGAGGCGGCGAAGTTGA TTAGGACTATTGTTGAGGTTGTGGAGGCTTGTCATTCTCTTGGGGTTATGCATAGAGACCTTAAGCCTGAGAATTTCTTG TTTGATACTGTTGAGGAAGATGCTAAGCTGAAGACAACTGATTTTGGGTTGTCTGTGTTTTACAAGCCAGGTGAGGTTGC TGGTTTTAGTTGCCTTTTGATTTTCTGTTCCGATCAGAGTGAGATTGGTAAAGTGGTGATTGATATATGGTTTGTTATGG TGTTTACAGTCACATAGATTTTGTTTTATAATGTGATGATTTGAAGGAGAGGGTGATTATTTGCTGATTTGTTGCGTGAC TTGGATGGATGTGTGATTCATTTGCTTATATGTTCCTGCATTTTTTGAAATGTGTTTGGTTTTTATATGATTGGATGTGA GGGGATTTGTTGTTGAAAAGCTTTGGCTATTGACTATCATTGATTGGTTGTGTTCTTTAGCTGCTTGCTTTTTCTGATTG ATTATACCTGGACCTTGTGCGCGAGATGGGTTTAAGGGGGCAATGGGATCTTGGGAATATTAAAATCAGAGTTTACCTTA GCAACTAGTTGCCATTGCTTATGTTATTTATATTTTTCACCTTCATGAAGTGTATTGGAATATCATGAGTTTTAGAAAGA TATATATAGTAATATTGCTCGTTATTCAAGGTTCATGGCATGGTTCTCTGACTATGGAACCTCAAAGAGGATATATGGCA CTGTGTTGTATTTGATGCAGAAGCTGGGGTTCGAAAAATTGGATTTCCCTATCCTTACTTTTCATGGTCTCAATTAAATG TAGAACTAGACGCTGCCATTCTTTGTGAATGTTCTTCCTTCACGCATTTAACAATAAACACGAGTGAGTGAAATTTATGC TAGAAATGAAATTGCATGCATTAGAAATGTTGCTCTGATTTTAAGGTGATTTGAACTAATTCTTTTGGTACTTGTTGATC TTGCCATAAGGTGTCCAGAGTCAGAGGTATTGTTTTTATCTGGATCTACTTCCAGCTTGGTGCGCTGGGTTTGCATCTTT TATGCACATTTATATGTCTGGAACAGAATCCATCCTTAGTATACCTAGTGGTTGCTAATTCTAGCCATCAAATGATATTA GACATTTCTAATCCTGAAGTTTCTGCTCGTGAAAAAAAAATACTAGACGTATCGCCCAAATTATTGGTCCGGTACTAGAT GTACCTTTTACCCCAGGAAAGATGCCTTAAGAATATTTATTATTCTTTACTGTAAAAGCGGTCAATTATTGGTTTGAATA GTTATATATACTGTAAATGAAGCTTCACAAATTTTATAAATGTGGTTCATAGCAAATGACTTGAAAATTCCATGTCATAT TAGAGAATTGAAATCATAATCTTATAGGTTTTGAGAAATATAAAGAGATCTATTTTTTCATGTTTTTATTTGGTTCAATG AGATGGAGCCAGAAAGTTAATTTACTATCTTAATGGAAAAAGATGAAGAGGGTGTTCAATGGGATCAGTGCAGTGAGTAA CCTACTTCTGTCCTCTGCAAGTTGTCCAAAGGCATGAACTTTTGGCTTTCTAACTGCTAGAAGTTTGAATTCCGGAAAAT GGCTATACATGCCTTTGAGTATGCCTTCATATGTATGGTCATACTATAGTGAAGTGTTTTTAAATTTAAACTTCTTTGTC TTGGTGACTGGAAATTATATGTTGAAATGAAAACTGAAGCTATTCAGTCTGGTAGTATGAATTTTTCACGGTTCTTCAAT TTATTTATTACCAGATCAACCGGAAGCCCTTCCATGGTGTCTATCTTAACTTATTGATATGCTTTTCAGGTGAAACCTTT GGTGATGTTGTTGGAAGCCCATACTATGTTGCACCAGAGGTCTTGCGCAAGCATTATGGACCTGAAATAGATGTGTGGAG TGCCGGTGTTATTTTGTACATCTTATTAAGCGGGGTGCCACCATTTTGGGCTGGTAGCTATCTGTCATTCATACATTAAA TTATCAATTGTGGATATTGGCTATAGGCCCCACATATTACTGTTTTCTTCATGTTCATCATTCCTAATTGCTAATACGGC TCTGAAAATTTTGTCACCTAAAGAAACGGAGCAGGGGATCTTCCGACAGATATTGATGGGAAGACTTGATTTCCAGTCTG AGCCATGGCCCAGCATTTCAGACAGTGCCAAGGATCTAATTCGAAAAATGCTTGATCGGAATCCAAAAACAAGGCTTACA GCTCACCAAGTACTCTGTAAGTCTATAAAATTTCATATAGAGCAAGTATCATATTTGTATGAATACTTGAACAATTATTG GAATATGATTGGAGGTTGTGGCACTTACGTGATTTTCTATGTCAGGCCACCCATGGATTGTTGATGACAACATTGCACCT GATAAGCCTCTAGATTCTGCTGTTTTGTCACGGCTGAAGCAGTTCTCTGCAATGAATAAACTTAAAAAGATGGCTTTGCG TGTAAGGCCTCCAAACCTTTTTGTTTAGGCTTCATGAGAGAACAGTTTAATCTCATATTAATACATTGTTCTGTCTTCTA GTCAGAAGGAAAAGGTAAGTATATGCTTTTTTAGTAGAATTTAGGTTAAACTGATGGCAGAGCTTTCTTATAAACAGGAA GGTCTTTATGAATTTCATACACATTGCTAGGCCCTCCTTGTCTTGACTGGGAATTTAAATGTGATCCATTTCATGGTAGT ATTCTGCATGTCAACTCCTAATACCATGACACTTCGAGTTTTGTATGCTTCCTCCTAGGTTATTGCAGAGAGTCTCTCTG AGGAAGAAATTGGTGGTCTGAAGGAGTTATTCAAGATGATTGATGCAGACAACAGTGGAACTATAACATTTGATGAGCTA AAAGAAGGCTTAAAGCGAGTAGGATCTGAACTTATGGAGTCTGAAATCAAGGATCTTATGGACGCAGTAAGATATCTAAA TGTTTTAGACTTTAATCCATTTTTTCTATTTGTGATGTTTTTTGCTTTCACATTAACTTGACAAGATTTATAATCTTGCA TGTGACAGGCTGATATTGATAATAGTGGGACAATTGACTATGGTGAGTTCATTGCTGCTACAGTCCACTTAAATAAGCTG GAAAGAGAGGAGAATCTGTTGTCAGCTTTCTCCTATTTTGACAAAGATGGAAGTGGATACATAACCATTGATGAGATACA AGAAGCTTGTAAGGAATTTGGTTTGGATGATATCCATATTGATGATATGGTCAAAGAAATTGATCAAGATAATGTAAGTA TTTTGTTGTCTTGCAATTATGAGCTTGCTTGTATTGGGCATTTGCTTCTGCAACTCATATTTTTAGATTACAAGCCTTTA TTAGCATTGTTTTGTCTTTCATTGAAGAATTATGGCCCTGTTGGTTGTGGAAATGGATTCTATGTAGTCAGTTTTTGGTG CAGTCATTACAGTCTTAGCCATTGGATGAAAATCGGACGATATGATTCTGAGAACAAGTTTTACATGTGATTAATACACT TGAATCAAACCGTCTGATTTTCATCCTATGGCCAAAGTCCTTTTACTGCAATGACC
CDS sequence (LotjaGi1g1v0330000.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCAAACCCACCACCACAGCACCACCAAAACCCACGACGGTCCTCCCCTACCTCACCGAAAACATCCGTGAAGTCTA CACCTTCGGAAGAAAGCTCGGCCAGGGTCAATTCGGCACCACATATCTCTGCAGACACAACTCCACAGGCTGCACCTTCG CCTGCAAGTCAATCCCGAAGCGGAAGCTGCTCTGCAAGGAGGATTACGATGATGTTTGGAGGGAGATTCAGATAATGCAC CACCTATCGGAGCACCCACACGTTGTCAGGATCCATGGGACTTACGAGGATGCTGCTTCTGTTCACATCGTTATGGAAAT CTGTGAAGGGGGTGAGCTTTTTGATAGGATCGTGCAGAAGGGGCAATACAGTGAGAGAGAGGCGGCGAAGTTGATTAGGA CTATTGTTGAGGTTGTGGAGGCTTGTCATTCTCTTGGGGTTATGCATAGAGACCTTAAGCCTGAGAATTTCTTGTTTGAT ACTGTTGAGGAAGATGCTAAGCTGAAGACAACTGATTTTGGGTTGTCTGTGTTTTACAAGCCAGGTGAAACCTTTGGTGA TGTTGTTGGAAGCCCATACTATGTTGCACCAGAGGTCTTGCGCAAGCATTATGGACCTGAAATAGATGTGTGGAGTGCCG GTGTTATTTTGTACATCTTATTAAGCGGGGTGCCACCATTTTGGGCTGAAACGGAGCAGGGGATCTTCCGACAGATATTG ATGGGAAGACTTGATTTCCAGTCTGAGCCATGGCCCAGCATTTCAGACAGTGCCAAGGATCTAATTCGAAAAATGCTTGA TCGGAATCCAAAAACAAGGCTTACAGCTCACCAAGTACTCTGCCACCCATGGATTGTTGATGACAACATTGCACCTGATA AGCCTCTAGATTCTGCTGTTTTGTCACGGCTGAAGCAGTTCTCTGCAATGAATAAACTTAAAAAGATGGCTTTGCGTGTT ATTGCAGAGAGTCTCTCTGAGGAAGAAATTGGTGGTCTGAAGGAGTTATTCAAGATGATTGATGCAGACAACAGTGGAAC TATAACATTTGATGAGCTAAAAGAAGGCTTAAAGCGAGTAGGATCTGAACTTATGGAGTCTGAAATCAAGGATCTTATGG ACGCAGCTGATATTGATAATAGTGGGACAATTGACTATGGTGAGTTCATTGCTGCTACAGTCCACTTAAATAAGCTGGAA AGAGAGGAGAATCTGTTGTCAGCTTTCTCCTATTTTGACAAAGATGGAAGTGGATACATAACCATTGATGAGATACAAGA AGCTTGTAAGGAATTTGGTTTGGATGATATCCATATTGATGATATGGTCAAAGAAATTGATCAAGATAATTCAGTTTTTG GTGCAGTCATTACAGTCTTAGCCATTGGATGA
Protein sequence (LotjaGi1g1v0330000.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSKPTTTAPPKPTTVLPYLTENIREVYTFGRKLGQGQFGTTYLCRHNSTGCTFACKSIPKRKLLCKEDYDDVWREIQIMH HLSEHPHVVRIHGTYEDAASVHIVMEICEGGELFDRIVQKGQYSEREAAKLIRTIVEVVEACHSLGVMHRDLKPENFLFD TVEEDAKLKTTDFGLSVFYKPGETFGDVVGSPYYVAPEVLRKHYGPEIDVWSAGVILYILLSGVPPFWAETEQGIFRQIL MGRLDFQSEPWPSISDSAKDLIRKMLDRNPKTRLTAHQVLCHPWIVDDNIAPDKPLDSAVLSRLKQFSAMNKLKKMALRV IAESLSEEEIGGLKELFKMIDADNSGTITFDELKEGLKRVGSELMESEIKDLMDAADIDNSGTIDYGEFIAATVHLNKLE REENLLSAFSYFDKDGSGYITIDEIQEACKEFGLDDIHIDDMVKEIDQDNSVFGAVITVLAIG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 7 | 451 | 445 | 3.8E-279 | – | |
| PANTHER | 7 | 451 | 445 | 3.8E-279 | – | |
| SUPERFAMILY | 13 | 305 | 293 | 4.86E-87 | ||
| CDD | 26 | 284 | 259 | 4.74387E-139 | – | |
| Gene3D | 27 | 110 | 84 | 2.1E-159 | – | |
| ProSiteProfiles | 27 | 285 | 259 | 49.064 | ||
| Pfam | 27 | 285 | 259 | 3.4E-78 | ||
| SMART | 27 | 285 | 259 | 1.2E-103 | ||
| ProSitePatterns | 33 | 56 | 24 | - | ||
| Gene3D | 111 | 288 | 178 | 2.1E-159 | – | |
| ProSitePatterns | 147 | 159 | 13 | - | ||
| Gene3D | 289 | 450 | 162 | 2.1E-159 | – | |
| SUPERFAMILY | 325 | 450 | 126 | 1.01E-37 | ||
| ProSiteProfiles | 328 | 363 | 36 | 15.629 | ||
| SMART | 332 | 360 | 29 | 4.9E-7 | ||
| Pfam | 333 | 393 | 61 | 2.0E-10 | ||
| CDD | 333 | 392 | 60 | 5.72171E-18 | ||
| ProSitePatterns | 341 | 353 | 13 | - | ||
| ProSiteProfiles | 364 | 399 | 36 | 11.417 | ||
| SMART | 368 | 396 | 29 | 6.9E-4 | ||
| ProSitePatterns | 377 | 389 | 13 | - | ||
| ProSiteProfiles | 400 | 435 | 36 | 14.988 | ||
| SMART | 404 | 432 | 29 | 0.0053 | ||
| CDD | 405 | 451 | 47 | 1.54942E-8 | ||
| Pfam | 405 | 432 | 28 | 7.4E-7 | ||
| ProSitePatterns | 413 | 425 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0330000.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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