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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0345800 |
| Transcript ID | LotjaGi1g1v0345800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Myb family transcription factor family protein; TAIR: AT1G09710.1 Homeodomain-like superfamily protein; Swiss-Prot: sp|Q15554|TERF2_HUMAN Telomeric repeat-binding factor 2; TrEMBL-Plants: tr|A0A0B2PMP7|A0A0B2PMP7_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0345800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:81241107..81248843) extracted from Lotus japonicus Gifu genome v1.2.
CGTGACTTTATTTTCACCACCTACAGTTTAGTGTCACCATCATCTCAGCTTCCTTTCTCTTCTTCTCTCTCCTCGCCGGA ACAGCCACTCTTGATTTCCCCCTCTTTTTATTAGGGTTTCGCTTCTCCCAAATCGCAACACCATTCCACCGATTTCGCAT TCTTCTGACTCCAATCAACACATGCCGACTTCAGGCACAAAGTGCAACAAGCTCTCTTTCTCTGAGGAAGACGCTGCAAC TCTCACAGAGAGGTAATCTTTTTTTTTTCTTTTTTTTTCTTCAATTTTTTGTGGTTTGATTCAGGTTCTTGATGATTTGG GGATTTTTTTTTTGTTCTTGGTGTGGTGCAGGTACGATACAACTACTGTGTTAACATTGCTCCAAGAGATAGCAAATTAT CCTCATACGAAGATTGATTGGAATGAGTTGGTGAAGAAAACCTCCACTGGTATTTCTAATGCCAGGGAATATCAGATGCT CTGGCGTCACTTGGCGTATCGCGATGCCTTGCCTGAAAAGTTTGAAGATGGAGCTCAGCCTCTGGTTTGTTCCACATTTT CCACCTTTGTTTGTTATGTTGATATGTTTAATTGTAACTGTCAATTCGATTTGGGTATTTCGTTTTAGAGCTTCAATTTA TTCATGCCTGCTATGGTTGGAATAGGGATAAGGGTCACCATGACAATATTTGGCTCCTCTAGCGTGAGGGAAATCATTTT AGAGGGAAAAATAAGTCATTACAACGACTGATTGAGTGACACGATTGAGATTGTGATCATATACTTGCACATGTTAAGTA AATCATGTTGTTTTTTCAATTTCAATCATTGATTTCTCAATCAACATCGCGGCTAACGTGACTCCTTTTGTTAGTGGAGT TAAATTCACCATGTCGTCGTCACAACTGCTGATTGAGAGACACGATTGAGATTGTGATTATATACTTGCACATGTATAAT AAAAATCATGGTGTTTTTTAAATTTCAATCATTGATTTCTCAATCAACAGTTGTGAGTGTGATGTCTTACTTCACTGGCT AAAGTGGCTCCTTACGTTAGTGGAGTTAAATTCACCGTGTCGATACAGGATATTGCAATAATTAAATCTCAAATAAGTTT TAGAGGTGTACTTGTTTGTTTATGCTTGTGTATCCATGTCAGTGGTCAGTGCTATTTAATACCCATAGTTACCTACTTGA GCTGAATTTCCTAGTCATTTCATCTGAATAGCTCAATTTTTTTTTTGTGTCATGTGCAATGTTTTGGGCTAGCAACCAAA TTTTATTATAAGGTGCTGAATAATGAAGAACCAAATGTGATAAAATTTTCCCAAGGCCATTTAGTTTTATATGCTTTTGA AGTCTGAAATGTGACCAAGTTTTGTTTGATGTTACAATATATAAATTCACGGCATTGTACTGGCTGAATTGCGAATGCAT AAAACATACTGTTAATTTTGTTTATTTTTTGCGTCAAAATTATGCATATAACAACAGGGATGAAGCAGTTACTCAACACT AGTGATTATAGTTGAACTTGTTCTCGGCATGGAAATTCACCTCCTTCTGAAAATAAATTTGTCATTGCTATTCTGGCATT AATTTTATACAATCTGCTGTACTCGTATTTTTTCATTGAGTTCTTGGATAAGTATTGTACTTTCTTGTGTTGATCTTATT TGGAGTCTTACTTCCAGGATGATGATAGTGACCTAGACTGTGAGCTGGAAGCGTTACCCCCAGTAAGTGAAGAATCTGCA TTGGAGGCTGCAGCATGTGTGAAGGTGAACTGAATATACTAGGCCTTTAGGCTCATGACTTAGCTGGTTACATTTTACTT ATTGAATTATAATATGACCAGGCTTGCATCAAATGAAATAGTGTTCTGGGCACATTTTTCAAATTTTGTCTATTTGTTGA AAATGTCCTTACTTTTGAAGACAAACCACACATTTAAATTTTGCAAATTCCATTCTGATTGTGGGAAGATTTATAATTAT AGTAACAAAGACGACTTTGTCAGATTAATACCTGACTGTGAGTTAGCCTGCCTTTACTGGACACAACTATAAGACCAATA GTAAGGAAATTAAGTACTTGAAAAAAGCAAAGTTTAAGTGTAGTGAAGGTGGCACTGCTGGAATGAATAATACATGAAAA AGATGAGATTAGGAATTAATATATGTGAGAGAAAGTCAATGTAGCACCTGTAAAGGATAAGATGACAGATTCTTGCCTAA GGTGGTTTGGTCACATGAGAAGGGTAGTAAAGGAGCTAAAGATGTATTAGATGACTCAAATGAGAACTTACTACAAAAAC TGAAGTTTTTGTTTATAGTAAAGCACAATAATGTTGATTGATCTAAGTAGATGACCCCATTTAGCATGGAATAACTCAGT TCTCTTCATGGTTTGAATGTTTAAACATGCTGGTTGTGCTATTTACATCCATTGTTTATTTGTCAGGTAATGGTTGCTTC CTGTACGTTTAGTGAATCTACCCCTACTAGCTCAACAATTGAGGCTCCATTGACTATACATGTTCCAGTTTGCCATTCAT CTCGAACTCCTAATGAAACCTCACAGCCCTCTAATTTAATGGAAAGGACAACCATGACCTTTCCAGTTACTGTTCCGAGA CAGACACTGCCAACTATATCATCAACAGATGGTATAGAAACCAAGGGTAATATTGGTGGTAACTTGGCTTCCAAAAGAAA AAGAAAACAATGGTCAGAGGAAGAGGACATGCAGCTACGAGCTGCTGTTCAGAGATTTGGTGAAGGGAATTGGGCAACCA TGGCAAAAGGAGACAATTTCCCTATTAAGAGAAGTGCAACACAGTTGGCTCAGGTGTTTTTCAACCCTAAAATTTGTGAA TTACATGGAAATATCCACTCGTATTATATGATATCTTAGTATACGTGTATATTTCATTGTTTGTCCATGAAAGACAAATG TTTGTCATTACCCCCTTTGGTAGATAGGAGTATTTGCAAATGGTCATATCCATCAGGATGATACAGAAAGAAAAGAGAAG ACAAAAGGGGTTTTAGTGCTTGAAAATCGTGTTCTCTTTTATTGTTGAACCAGTAACATTTTCCCCCTTAATCTCACTTT CTGTAGTATGTTTTTAAGTGTTTGCTTGATTTGTGGTCTTATAGCTCTAGAAGACCACCATTTGGCAATTGAAATGTATT GTGAAGATCCTGACATCATGCATCACATAATCTTATGTAATTCGGTTGGTCTTGAACTGGTCTTAGACATTCAATATCAC CAAGATTCATTATATGTACGGTATCCATTACATTTGGATGGCTTACAGTGAGTTGCAATTCTTTTATGATCTCTGAGGTT TTTGTCTTTTGCCTTTTACTTGTAGTGGGTTCATTGAATATTCATAGTTTCATACTCTTCTAGGTGGGTACCTTTTAAGT GTTCAACTTGTTGACCATAAATATTTATCAAAACTCATGGTGGTTTATGTTAAGATGCTAATAGATCGTGGTAGGCATTA TTTAAATAAATACTGGAAGTCTGGAAGGAGGTCGCAATCCTCGGTTTCCTATTGATAGATTGACCACTTGACAAGGATAT GAAGAAATTGTCTTTTTTTAGCTGAAATCTGATTTCCTCATCTAATGTAGCCAGATCTAATTTGGGGAGAGGTTACTTTC TCTTGTGCAGCTATTGTAGTTGTTCGTGTTGAAACCTGTCCCTTTTTTTGTGTACAACTATGCATTGTGTGCCAGCATGT CAACCCTTCCTTGATTCTAAATGGATGAAATGAAATTTGCGAGATGAAAAAAGAGTCTGTATTATTACAAACACAGTGCT TGTCTTTCTGTGGATATCATTGTTGATTGGAACATGAAACTGATGGCACTGATTATATTGTAATCCGTTGTCATCTAGTC AGGTCTGGATGTCTGGGTATCGCCCAGTTTTCCCGGGTTCAAATCCCGGCAACGGAGTTTTACATGTACATTCTTCAAGC AACTTCTGCTGTGGAGAAGCCTTTTGATAGGATGAACAGTGCTCGTGAACAGTAGCAGTTAGAAAGTTATTATTTAATTA TTTGTTGGGGTAGTTATTATTAGTTATTTACATCAGTTTATGTTAGTTATGTTCTATCAAAACTGCCTAGGGGTGGTTAT TAAATTTCTGGTTATAAATAGGAGTTGTGGCTGTTAGTTTAGACATTCAGAAATTGGGTGGTTGTCTTAGGGAGAGACTG GACTCTCAAAATTCCAGAATCTGTAGGAGAGAACTGGCTCTCGAACACCAGTGCTTCCATAATTATTCTGTAATAAATTC TGTTCTTATCACCTTTTGTGACGGTTTAGGCCATAGTTAAATGGATCTTTGTTTAGGATTTCGGGGGCATTTCTTGTGTA TGCATTTAATTGTACTGATTGTTTTGTGAATATATTAATGTGATTTAATAATTATTCTAATTCACCTATTTTGTTATTTT CTTTTTATGCTACATATGGTCATGGTTAATCTAAATACTTGCAGAGGTGGAGCACTTTACGTAAGAAAGACTGCAGTGCC AACTCAGGAACCAATTTGCCCAACCCACAGTATACTACTGCTGAACAACTGGCAACTCGGCACTCTTTATCTTTAGCCCT TGATATGCCATTCAAAAAGTTAACTACTCCTGGAATTTCTGCTCCTGGTAACTGTCTTTTGACTCTTTTCTTTCAATAAT TTATTTTCATATTAATCAAATTCCAGATTTGCTATATGTGACTGTTACTTGTGTTCACTCTTTTTCTTATTTTCTTTAAA TTTCCTACTTATCAACTGAGTCTATGATTCTCAACCTTATTGACTCTTCTTGATGATTGTGGATATGTTCAGTGCTTGTT TGAGCACCACTTGTTAATCATGGTCTTGCTTCATTTTCTGTTTTATGTTTAGCCTTCTTTCAAATGCTAATTGCAAGATG CAAATGTAATTATAAACACCAATTTTTTTCCTCAAAACCACGAAATTAATGAATATATTGCTTTCATTTTTCTCCTACAT ATGACTATGTTAGGATTATTTAAATTTGTCACTGAATATAGCTAAGGATTATGTAATGGACAAAACTTATGTGCTGTTTC ATAGGTGCAATTTTTACTGTTGACAATTATAAAATGACACTTGTGCTAAAAAATGGAAAATTGAAGGATTTTTTTTTTAT TAATAAAAACTAAGAAAGTGGGTGGGTGAGTTTTTTATTTGACAACAGGACAAACAGTACTTTACCTAAGTGTTATCCTT ATGTAATATGATAGCACAACTGCTGGGAAACATTAATGAGCACATTTCCATCACCATCCTGCAGGAGTTGCATAAAATAG CTCGAGTATGATTGTGTAGTACAGTTGTACCAATATTATGAATTTAGCAAGACTATTGATAAATGCATCATGGTTTCTTG GTGTTATACTTTTTTTATAAGCTGTGTGCTGTATTTTATTAGAGTAGAGAGGACTTTTTTTTTTGAAAGTGAGTAGAAAG GAACTAAGTGTAACAGAAAATGTAACTGTATTTCATCTTCAGTTAGTATAATGTACACGGTGTGGTCCTATATATACACC AATGGAGTCGGTTACAAGCAGAGTCTAGAAGAAGACTCATACTGACATCAGTAGTAACAAACTAACAACTATCTAGTAAC TACTATATTCTCATATATTTAACTCTAATAATGTCTATAACACGTGGTATTTGGCTGCAGATTATTAGGGTATCATATAT ATGATACGATGGGCTTTATTTGTATATTTATATTGAATTTTGATGGCTTTTACAATGTGACAAAGATAGCTAAGTATTTT TCTTTTATTTAGTTAACTGCTAGTGAAAGAATTATATTTCTAATTGGGTACTCAAAGTGCAAGATATTGGCTCATAGATC TTCTAGAATTTTTTTTATTGATATAGCTCGTTGTTCTAATAGTGTTCTCACTTCAATGCAAGGCCCATGAACTTTCTGGA AAATGTTATTGTTAATTCAATATTTTTTTTTGATAGGCTTGTTAATTCAATATTCTAATTGCTCAAATTATGCTTAAGGC GTTTGTATGACCTCTGGATTAAATGGTTGCAGTTAGGACATCCGCATCAATTAAAAATCAAGTTCAGCCTTGTACTTCTA AGGTGGTTTCCACAGTTCAGAGTAGTTCTGTACCACCTCAGCATCCATCTCAACAAGTTTTGTTGGGATCCGCAAAATCT AAATTAACATCAGAAAATCCAGTCTCAAAGTGTAATCCAGTTTCAGATCCTGTGTTAAAATCTACCACAATTCATTCTGG TGCAAAGGTAACATCAGAAAATCCAGTCTCAAAGTGTAATCCAGTTTCAGATCCTGTGTTAAAATCTACCACAATTCATT CTGGTGCAAAGGTTGTTCCACGATCTATTGCTGTATCACAATTTAAGGGTGTTCAAGTAAGAAACATGGTAGGTAGTGTG CCTGCAGGTAGCTGTCTGACAAAGACACCCATTTCTGCTGGTTTGCCTTCTGACATAAAGGTTCATTCAAATGCACCCCG TATTTTTATCATGTACTAGTATTAAAACACTATTAAAATGGAAAATGTTGTGCTTATTGCTTTGTACATGTCTCAACAGG ATAAACATGTTTCTTCCGGGGTTGGTGGAGCTTTGCCAAAGCAAGAAGTTAATCCGACTAAAGATTGTAGAGTTTCTAAT GTTGGTTCCATTCCAAAAGAGAAGGCAAGAGAAGTCGGCACTCCTGTGGTCACTGCTCGGTGTCAAGTTGATGGCAATCC GGATAAGGGGCGAGTAGATGTAGTTAAACCCAAGAGCATGCCTCCTATAAAAGTTGCAGGTGAAAAAATTTCACAACCTA AAGCAGTCCCACAAAATACAGGAGGGTGTGTAGAGCAGGGAAGTGTTAAGAATTCAAACTTCACCCCCAAGACAGAGACT ACTGAGAATGAGAATGGCAAACTGCATAAAGAAGGTCAAGATTCAGAACAAGATAAGAGGAAAAATTCAATTAGTGGAAG TTCTGATAATCAAAACACAAATGTGAAGCATGTAAATCTGCCAACACAAGATCAATGCAAGCAAAATTTGGAACCTCCCA AGATAGTTAAAAGTGAAAACTGATCGCAATGTTTAGTGATTAGTTTGTGCAAATGAGTAGAGTTTTTCCTTTTATTTCCT ACTGAAACTTGTGGTGTAATAAGTTGTTTTAAGTATTCATAAATCATTAGTGTTTTGTATTATTTTTTAAAAATTCAAGT TAGCGGTAAATATAGTTTGATGTTGGACAATGTTTGAGTGGTGAAATGATTTTTGCGGAAAGTTTTTTTTGACAATTATC AGAAAAGTCTATTCTCATTGATGAGGGAGAAAATGAAATTGAAATTAAAGAAATGTTAGGGGACAAAAATATCCTTAATG AAATTAGAATATGACAACTAATAACCCTTGACCTACATATAAGTTTAACCTTCTCTCATTGAGACTTCTTTCATTCTTGG TCATTTATTCGTTGAAGATTAGTCACCAGAAGCATATTTTTCTGGTCAACCTACTTGCTCTTATCAAGTAAGGTCTTATT TTCACTTTCAATTGCTCATCCTTTTTGTTGCACGTTATTTCAAATCCAGACTTTTCATCTGCAAATCATTCATATTGTTC GCTGTTGTCTACTGCTATGTGGTGCTATCTACTGTGACGATCACATGTATCTGCAAC
CDS sequence (LotjaGi1g1v0345800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGACTTCAGGCACAAAGTGCAACAAGCTCTCTTTCTCTGAGGAAGACGCTGCAACTCTCACAGAGAGGTACGATAC AACTACTGTGTTAACATTGCTCCAAGAGATAGCAAATTATCCTCATACGAAGATTGATTGGAATGAGTTGGTGAAGAAAA CCTCCACTGGTATTTCTAATGCCAGGGAATATCAGATGCTCTGGCGTCACTTGGCGTATCGCGATGCCTTGCCTGAAAAG TTTGAAGATGGAGCTCAGCCTCTGGATGATGATAGTGACCTAGACTGTGAGCTGGAAGCGTTACCCCCAGTAAGTGAAGA ATCTGCATTGGAGGCTGCAGCATGTGTGAAGGTAATGGTTGCTTCCTGTACGTTTAGTGAATCTACCCCTACTAGCTCAA CAATTGAGGCTCCATTGACTATACATGTTCCAGTTTGCCATTCATCTCGAACTCCTAATGAAACCTCACAGCCCTCTAAT TTAATGGAAAGGACAACCATGACCTTTCCAGTTACTGTTCCGAGACAGACACTGCCAACTATATCATCAACAGATGGTAT AGAAACCAAGGGTAATATTGGTGGTAACTTGGCTTCCAAAAGAAAAAGAAAACAATGGTCAGAGGAAGAGGACATGCAGC TACGAGCTGCTGTTCAGAGATTTGGTGAAGGGAATTGGGCAACCATGGCAAAAGGAGACAATTTCCCTATTAAGAGAAGT GCAACACAGTTGGCTCAGAGGTGGAGCACTTTACGTAAGAAAGACTGCAGTGCCAACTCAGGAACCAATTTGCCCAACCC ACAGTATACTACTGCTGAACAACTGGCAACTCGGCACTCTTTATCTTTAGCCCTTGATATGCCATTCAAAAAGTTAACTA CTCCTGGAATTTCTGCTCCTGTTAGGACATCCGCATCAATTAAAAATCAAGTTCAGCCTTGTACTTCTAAGGTGGTTTCC ACAGTTCAGAGTAGTTCTGTACCACCTCAGCATCCATCTCAACAAGTTTTGTTGGGATCCGCAAAATCTAAATTAACATC AGAAAATCCAGTCTCAAAGTGTAATCCAGTTTCAGATCCTGTGTTAAAATCTACCACAATTCATTCTGGTGCAAAGGTAA CATCAGAAAATCCAGTCTCAAAGTGTAATCCAGTTTCAGATCCTGTGTTAAAATCTACCACAATTCATTCTGGTGCAAAG GTTGTTCCACGATCTATTGCTGTATCACAATTTAAGGGTGTTCAAGTAAGAAACATGGTAGGTAGTGTGCCTGCAGGTAG CTGTCTGACAAAGACACCCATTTCTGCTGGTTTGCCTTCTGACATAAAGGATAAACATGTTTCTTCCGGGGTTGGTGGAG CTTTGCCAAAGCAAGAAGTTAATCCGACTAAAGATTGTAGAGTTTCTAATGTTGGTTCCATTCCAAAAGAGAAGGCAAGA GAAGTCGGCACTCCTGTGGTCACTGCTCGGTGTCAAGTTGATGGCAATCCGGATAAGGGGCGAGTAGATGTAGTTAAACC CAAGAGCATGCCTCCTATAAAAGTTGCAGGTGAAAAAATTTCACAACCTAAAGCAGTCCCACAAAATACAGGAGGGTGTG TAGAGCAGGGAAGTGTTAAGAATTCAAACTTCACCCCCAAGACAGAGACTACTGAGAATGAGAATGGCAAACTGCATAAA GAAGGTCAAGATTCAGAACAAGATAAGAGGAAAAATTCAATTAGTGGAAGTTCTGATAATCAAAACACAAATGTGAAGCA TGTAAATCTGCCAACACAAGATCAATGCAAGCAAAATTTGGAACCTCCCAAGATAGTTAAAAGTGAAAACTGA
Protein sequence (LotjaGi1g1v0345800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPTSGTKCNKLSFSEEDAATLTERYDTTTVLTLLQEIANYPHTKIDWNELVKKTSTGISNAREYQMLWRHLAYRDALPEK FEDGAQPLDDDSDLDCELEALPPVSEESALEAAACVKVMVASCTFSESTPTSSTIEAPLTIHVPVCHSSRTPNETSQPSN LMERTTMTFPVTVPRQTLPTISSTDGIETKGNIGGNLASKRKRKQWSEEEDMQLRAAVQRFGEGNWATMAKGDNFPIKRS ATQLAQRWSTLRKKDCSANSGTNLPNPQYTTAEQLATRHSLSLALDMPFKKLTTPGISAPVRTSASIKNQVQPCTSKVVS TVQSSSVPPQHPSQQVLLGSAKSKLTSENPVSKCNPVSDPVLKSTTIHSGAKVTSENPVSKCNPVSDPVLKSTTIHSGAK VVPRSIAVSQFKGVQVRNMVGSVPAGSCLTKTPISAGLPSDIKDKHVSSGVGGALPKQEVNPTKDCRVSNVGSIPKEKAR EVGTPVVTARCQVDGNPDKGRVDVVKPKSMPPIKVAGEKISQPKAVPQNTGGCVEQGSVKNSNFTPKTETTENENGKLHK EGQDSEQDKRKNSISGSSDNQNTNVKHVNLPTQDQCKQNLEPPKIVKSEN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 374 | 374 | 1.8E-179 | – | |
| PANTHER | 1 | 374 | 374 | 1.8E-179 | – | |
| MobiDBLite | 177 | 208 | 32 | - | – | |
| Gene3D | 196 | 260 | 65 | 2.8E-16 | – | |
| ProSiteProfiles | 198 | 256 | 59 | 15.559 | ||
| SUPERFAMILY | 201 | 255 | 55 | 1.72E-11 | ||
| SMART | 202 | 254 | 53 | 1.4E-10 | ||
| Pfam | 203 | 251 | 49 | 8.3E-9 | ||
| CDD | 204 | 253 | 50 | 3.26154E-14 | – | |
| PANTHER | 372 | 458 | 87 | 1.8E-179 | – | |
| PANTHER | 372 | 458 | 87 | 1.8E-179 | – | |
| MobiDBLite | 515 | 610 | 96 | - | – | |
| MobiDBLite | 523 | 551 | 29 | - | – | |
| MobiDBLite | 552 | 573 | 22 | - | – | |
| MobiDBLite | 574 | 599 | 26 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of LotjaGi1g1v0345800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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