Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0345800 |
| Transcript ID | LotjaGi1g1v0345800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Myb family transcription factor family protein; TAIR: AT1G09710.1 Homeodomain-like superfamily protein; Swiss-Prot: sp|Q15554|TERF2_HUMAN Telomeric repeat-binding factor 2; TrEMBL-Plants: tr|K7KJ58|K7KJ58_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0345800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:81241107..81248843) extracted from Lotus japonicus Gifu genome v1.2.
CGTGACTTTATTTTCACCACCTACAGTTTAGTGTCACCATCATCTCAGCTTCCTTTCTCTTCTTCTCTCTCCTCGCCGGA ACAGCCACTCTTGATTTCCCCCTCTTTTTATTAGGGTTTCGCTTCTCCCAAATCGCAACACCATTCCACCGATTTCGCAT TCTTCTGACTCCAATCAACACATGCCGACTTCAGGCACAAAGTGCAACAAGCTCTCTTTCTCTGAGGAAGACGCTGCAAC TCTCACAGAGAGGTAATCTTTTTTTTTTCTTTTTTTTTCTTCAATTTTTTGTGGTTTGATTCAGGTTCTTGATGATTTGG GGATTTTTTTTTTGTTCTTGGTGTGGTGCAGGTACGATACAACTACTGTGTTAACATTGCTCCAAGAGATAGCAAATTAT CCTCATACGAAGATTGATTGGAATGAGTTGGTGAAGAAAACCTCCACTGGTATTTCTAATGCCAGGGAATATCAGATGCT CTGGCGTCACTTGGCGTATCGCGATGCCTTGCCTGAAAAGTTTGAAGATGGAGCTCAGCCTCTGGTTTGTTCCACATTTT CCACCTTTGTTTGTTATGTTGATATGTTTAATTGTAACTGTCAATTCGATTTGGGTATTTCGTTTTAGAGCTTCAATTTA TTCATGCCTGCTATGGTTGGAATAGGGATAAGGGTCACCATGACAATATTTGGCTCCTCTAGCGTGAGGGAAATCATTTT AGAGGGAAAAATAAGTCATTACAACGACTGATTGAGTGACACGATTGAGATTGTGATCATATACTTGCACATGTTAAGTA AATCATGTTGTTTTTTCAATTTCAATCATTGATTTCTCAATCAACATCGCGGCTAACGTGACTCCTTTTGTTAGTGGAGT TAAATTCACCATGTCGTCGTCACAACTGCTGATTGAGAGACACGATTGAGATTGTGATTATATACTTGCACATGTATAAT AAAAATCATGGTGTTTTTTAAATTTCAATCATTGATTTCTCAATCAACAGTTGTGAGTGTGATGTCTTACTTCACTGGCT AAAGTGGCTCCTTACGTTAGTGGAGTTAAATTCACCGTGTCGATACAGGATATTGCAATAATTAAATCTCAAATAAGTTT TAGAGGTGTACTTGTTTGTTTATGCTTGTGTATCCATGTCAGTGGTCAGTGCTATTTAATACCCATAGTTACCTACTTGA GCTGAATTTCCTAGTCATTTCATCTGAATAGCTCAATTTTTTTTTTGTGTCATGTGCAATGTTTTGGGCTAGCAACCAAA TTTTATTATAAGGTGCTGAATAATGAAGAACCAAATGTGATAAAATTTTCCCAAGGCCATTTAGTTTTATATGCTTTTGA AGTCTGAAATGTGACCAAGTTTTGTTTGATGTTACAATATATAAATTCACGGCATTGTACTGGCTGAATTGCGAATGCAT AAAACATACTGTTAATTTTGTTTATTTTTTGCGTCAAAATTATGCATATAACAACAGGGATGAAGCAGTTACTCAACACT AGTGATTATAGTTGAACTTGTTCTCGGCATGGAAATTCACCTCCTTCTGAAAATAAATTTGTCATTGCTATTCTGGCATT AATTTTATACAATCTGCTGTACTCGTATTTTTTCATTGAGTTCTTGGATAAGTATTGTACTTTCTTGTGTTGATCTTATT TGGAGTCTTACTTCCAGGATGATGATAGTGACCTAGACTGTGAGCTGGAAGCGTTACCCCCAGTAAGTGAAGAATCTGCA TTGGAGGCTGCAGCATGTGTGAAGGTGAACTGAATATACTAGGCCTTTAGGCTCATGACTTAGCTGGTTACATTTTACTT ATTGAATTATAATATGACCAGGCTTGCATCAAATGAAATAGTGTTCTGGGCACATTTTTCAAATTTTGTCTATTTGTTGA AAATGTCCTTACTTTTGAAGACAAACCACACATTTAAATTTTGCAAATTCCATTCTGATTGTGGGAAGATTTATAATTAT AGTAACAAAGACGACTTTGTCAGATTAATACCTGACTGTGAGTTAGCCTGCCTTTACTGGACACAACTATAAGACCAATA GTAAGGAAATTAAGTACTTGAAAAAAGCAAAGTTTAAGTGTAGTGAAGGTGGCACTGCTGGAATGAATAATACATGAAAA AGATGAGATTAGGAATTAATATATGTGAGAGAAAGTCAATGTAGCACCTGTAAAGGATAAGATGACAGATTCTTGCCTAA GGTGGTTTGGTCACATGAGAAGGGTAGTAAAGGAGCTAAAGATGTATTAGATGACTCAAATGAGAACTTACTACAAAAAC TGAAGTTTTTGTTTATAGTAAAGCACAATAATGTTGATTGATCTAAGTAGATGACCCCATTTAGCATGGAATAACTCAGT TCTCTTCATGGTTTGAATGTTTAAACATGCTGGTTGTGCTATTTACATCCATTGTTTATTTGTCAGGTAATGGTTGCTTC CTGTACGTTTAGTGAATCTACCCCTACTAGCTCAACAATTGAGGCTCCATTGACTATACATGTTCCAGTTTGCCATTCAT CTCGAACTCCTAATGAAACCTCACAGCCCTCTAATTTAATGGAAAGGACAACCATGACCTTTCCAGTTACTGTTCCGAGA CAGACACTGCCAACTATATCATCAACAGATGGTATAGAAACCAAGGGTAATATTGGTGGTAACTTGGCTTCCAAAAGAAA AAGAAAACAATGGTCAGAGGAAGAGGACATGCAGCTACGAGCTGCTGTTCAGAGATTTGGTGAAGGGAATTGGGCAACCA TGGCAAAAGGAGACAATTTCCCTATTAAGAGAAGTGCAACACAGTTGGCTCAGGTGTTTTTCAACCCTAAAATTTGTGAA TTACATGGAAATATCCACTCGTATTATATGATATCTTAGTATACGTGTATATTTCATTGTTTGTCCATGAAAGACAAATG TTTGTCATTACCCCCTTTGGTAGATAGGAGTATTTGCAAATGGTCATATCCATCAGGATGATACAGAAAGAAAAGAGAAG ACAAAAGGGGTTTTAGTGCTTGAAAATCGTGTTCTCTTTTATTGTTGAACCAGTAACATTTTCCCCCTTAATCTCACTTT CTGTAGTATGTTTTTAAGTGTTTGCTTGATTTGTGGTCTTATAGCTCTAGAAGACCACCATTTGGCAATTGAAATGTATT GTGAAGATCCTGACATCATGCATCACATAATCTTATGTAATTCGGTTGGTCTTGAACTGGTCTTAGACATTCAATATCAC CAAGATTCATTATATGTACGGTATCCATTACATTTGGATGGCTTACAGTGAGTTGCAATTCTTTTATGATCTCTGAGGTT TTTGTCTTTTGCCTTTTACTTGTAGTGGGTTCATTGAATATTCATAGTTTCATACTCTTCTAGGTGGGTACCTTTTAAGT GTTCAACTTGTTGACCATAAATATTTATCAAAACTCATGGTGGTTTATGTTAAGATGCTAATAGATCGTGGTAGGCATTA TTTAAATAAATACTGGAAGTCTGGAAGGAGGTCGCAATCCTCGGTTTCCTATTGATAGATTGACCACTTGACAAGGATAT GAAGAAATTGTCTTTTTTTAGCTGAAATCTGATTTCCTCATCTAATGTAGCCAGATCTAATTTGGGGAGAGGTTACTTTC TCTTGTGCAGCTATTGTAGTTGTTCGTGTTGAAACCTGTCCCTTTTTTTGTGTACAACTATGCATTGTGTGCCAGCATGT CAACCCTTCCTTGATTCTAAATGGATGAAATGAAATTTGCGAGATGAAAAAAGAGTCTGTATTATTACAAACACAGTGCT TGTCTTTCTGTGGATATCATTGTTGATTGGAACATGAAACTGATGGCACTGATTATATTGTAATCCGTTGTCATCTAGTC AGGTCTGGATGTCTGGGTATCGCCCAGTTTTCCCGGGTTCAAATCCCGGCAACGGAGTTTTACATGTACATTCTTCAAGC AACTTCTGCTGTGGAGAAGCCTTTTGATAGGATGAACAGTGCTCGTGAACAGTAGCAGTTAGAAAGTTATTATTTAATTA TTTGTTGGGGTAGTTATTATTAGTTATTTACATCAGTTTATGTTAGTTATGTTCTATCAAAACTGCCTAGGGGTGGTTAT TAAATTTCTGGTTATAAATAGGAGTTGTGGCTGTTAGTTTAGACATTCAGAAATTGGGTGGTTGTCTTAGGGAGAGACTG GACTCTCAAAATTCCAGAATCTGTAGGAGAGAACTGGCTCTCGAACACCAGTGCTTCCATAATTATTCTGTAATAAATTC TGTTCTTATCACCTTTTGTGACGGTTTAGGCCATAGTTAAATGGATCTTTGTTTAGGATTTCGGGGGCATTTCTTGTGTA TGCATTTAATTGTACTGATTGTTTTGTGAATATATTAATGTGATTTAATAATTATTCTAATTCACCTATTTTGTTATTTT CTTTTTATGCTACATATGGTCATGGTTAATCTAAATACTTGCAGAGGTGGAGCACTTTACGTAAGAAAGACTGCAGTGCC AACTCAGGAACCAATTTGCCCAACCCACAGTATACTACTGCTGAACAACTGGCAACTCGGCACTCTTTATCTTTAGCCCT TGATATGCCATTCAAAAAGTTAACTACTCCTGGAATTTCTGCTCCTGGTAACTGTCTTTTGACTCTTTTCTTTCAATAAT TTATTTTCATATTAATCAAATTCCAGATTTGCTATATGTGACTGTTACTTGTGTTCACTCTTTTTCTTATTTTCTTTAAA TTTCCTACTTATCAACTGAGTCTATGATTCTCAACCTTATTGACTCTTCTTGATGATTGTGGATATGTTCAGTGCTTGTT TGAGCACCACTTGTTAATCATGGTCTTGCTTCATTTTCTGTTTTATGTTTAGCCTTCTTTCAAATGCTAATTGCAAGATG CAAATGTAATTATAAACACCAATTTTTTTCCTCAAAACCACGAAATTAATGAATATATTGCTTTCATTTTTCTCCTACAT ATGACTATGTTAGGATTATTTAAATTTGTCACTGAATATAGCTAAGGATTATGTAATGGACAAAACTTATGTGCTGTTTC ATAGGTGCAATTTTTACTGTTGACAATTATAAAATGACACTTGTGCTAAAAAATGGAAAATTGAAGGATTTTTTTTTTAT TAATAAAAACTAAGAAAGTGGGTGGGTGAGTTTTTTATTTGACAACAGGACAAACAGTACTTTACCTAAGTGTTATCCTT ATGTAATATGATAGCACAACTGCTGGGAAACATTAATGAGCACATTTCCATCACCATCCTGCAGGAGTTGCATAAAATAG CTCGAGTATGATTGTGTAGTACAGTTGTACCAATATTATGAATTTAGCAAGACTATTGATAAATGCATCATGGTTTCTTG GTGTTATACTTTTTTTATAAGCTGTGTGCTGTATTTTATTAGAGTAGAGAGGACTTTTTTTTTTGAAAGTGAGTAGAAAG GAACTAAGTGTAACAGAAAATGTAACTGTATTTCATCTTCAGTTAGTATAATGTACACGGTGTGGTCCTATATATACACC AATGGAGTCGGTTACAAGCAGAGTCTAGAAGAAGACTCATACTGACATCAGTAGTAACAAACTAACAACTATCTAGTAAC TACTATATTCTCATATATTTAACTCTAATAATGTCTATAACACGTGGTATTTGGCTGCAGATTATTAGGGTATCATATAT ATGATACGATGGGCTTTATTTGTATATTTATATTGAATTTTGATGGCTTTTACAATGTGACAAAGATAGCTAAGTATTTT TCTTTTATTTAGTTAACTGCTAGTGAAAGAATTATATTTCTAATTGGGTACTCAAAGTGCAAGATATTGGCTCATAGATC TTCTAGAATTTTTTTTATTGATATAGCTCGTTGTTCTAATAGTGTTCTCACTTCAATGCAAGGCCCATGAACTTTCTGGA AAATGTTATTGTTAATTCAATATTTTTTTTTGATAGGCTTGTTAATTCAATATTCTAATTGCTCAAATTATGCTTAAGGC GTTTGTATGACCTCTGGATTAAATGGTTGCAGTTAGGACATCCGCATCAATTAAAAATCAAGTTCAGCCTTGTACTTCTA AGGTGGTTTCCACAGTTCAGAGTAGTTCTGTACCACCTCAGCATCCATCTCAACAAGTTTTGTTGGGATCCGCAAAATCT AAATTAACATCAGAAAATCCAGTCTCAAAGTGTAATCCAGTTTCAGATCCTGTGTTAAAATCTACCACAATTCATTCTGG TGCAAAGGTAACATCAGAAAATCCAGTCTCAAAGTGTAATCCAGTTTCAGATCCTGTGTTAAAATCTACCACAATTCATT CTGGTGCAAAGGTTGTTCCACGATCTATTGCTGTATCACAATTTAAGGGTGTTCAAGTAAGAAACATGGTAGGTAGTGTG CCTGCAGGTAGCTGTCTGACAAAGACACCCATTTCTGCTGGTTTGCCTTCTGACATAAAGGTTCATTCAAATGCACCCCG TATTTTTATCATGTACTAGTATTAAAACACTATTAAAATGGAAAATGTTGTGCTTATTGCTTTGTACATGTCTCAACAGG ATAAACATGTTTCTTCCGGGGTTGGTGGAGCTTTGCCAAAGCAAGAAGTTAATCCGACTAAAGATTGTAGAGTTTCTAAT GTTGGTTCCATTCCAAAAGAGAAGGCAAGAGAAGTCGGCACTCCTGTGGTCACTGCTCGGTGTCAAGTTGATGGCAATCC GGATAAGGGGCGAGTAGATGTAGTTAAACCCAAGAGCATGCCTCCTATAAAAGTTGCAGGTGAAAAAATTTCACAACCTA AAGCAGTCCCACAAAATACAGGAGGGTGTGTAGAGCAGGGAAGTGTTAAGAATTCAAACTTCACCCCCAAGACAGAGACT ACTGAGAATGAGAATGGCAAACTGCATAAAGAAGGTCAAGATTCAGAACAAGATAAGAGGAAAAATTCAATTAGTGGAAG TTCTGATAATCAAAACACAAATGTGAAGCATGTAAATCTGCCAACACAAGATCAATGCAAGCAAAATTTGGAACCTCCCA AGATAGTTAAAAGTGAAAACTGATCGCAATGTTTAGTGATTAGTTTGTGCAAATGAGTAGAGTTTTTCCTTTTATTTCCT ACTGAAACTTGTGGTGTAATAAGTTGTTTTAAGTATTCATAAATCATTAGTGTTTTGTATTATTTTTTAAAAATTCAAGT TAGCGGTAAATATAGTTTGATGTTGGACAATGTTTGAGTGGTGAAATGATTTTTGCGGAAAGTTTTTTTTGACAATTATC AGAAAAGTCTATTCTCATTGATGAGGGAGAAAATGAAATTGAAATTAAAGAAATGTTAGGGGACAAAAATATCCTTAATG AAATTAGAATATGACAACTAATAACCCTTGACCTACATATAAGTTTAACCTTCTCTCATTGAGACTTCTTTCATTCTTGG TCATTTATTCGTTGAAGATTAGTCACCAGAAGCATATTTTTCTGGTCAACCTACTTGCTCTTATCAAGTAAGGTCTTATT TTCACTTTCAATTGCTCATCCTTTTTGTTGCACGTTATTTCAAATCCAGACTTTTCATCTGCAAATCATTCATATTGTTC GCTGTTGTCTACTGCTATGTGGTGCTATCTACTGTGACGATCACATGTATCTGCAAC
CDS sequence (LotjaGi1g1v0345800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGACTTCAGGCACAAAGTGCAACAAGCTCTCTTTCTCTGAGGAAGACGCTGCAACTCTCACAGAGAGGTACGATAC AACTACTGTGTTAACATTGCTCCAAGAGATAGCAAATTATCCTCATACGAAGATTGATTGGAATGAGTTGGTGAAGAAAA CCTCCACTGGTATTTCTAATGCCAGGGAATATCAGATGCTCTGGCGTCACTTGGCGTATCGCGATGCCTTGCCTGAAAAG TTTGAAGATGGAGCTCAGCCTCTGGATGATGATAGTGACCTAGACTGTGAGCTGGAAGCGTTACCCCCAGTAAGTGAAGA ATCTGCATTGGAGGCTGCAGCATGTGTGAAGGTAATGGTTGCTTCCTGTACGTTTAGTGAATCTACCCCTACTAGCTCAA CAATTGAGGCTCCATTGACTATACATGTTCCAGTTTGCCATTCATCTCGAACTCCTAATGAAACCTCACAGCCCTCTAAT TTAATGGAAAGGACAACCATGACCTTTCCAGTTACTGTTCCGAGACAGACACTGCCAACTATATCATCAACAGATGGTAT AGAAACCAAGGGTAATATTGGTGGTAACTTGGCTTCCAAAAGAAAAAGAAAACAATGGTCAGAGGAAGAGGACATGCAGC TACGAGCTGCTGTTCAGAGATTTGGTGAAGGGAATTGGGCAACCATGGCAAAAGGAGACAATTTCCCTATTAAGAGAAGT GCAACACAGTTGGCTCAGAGGTGGAGCACTTTACGTAAGAAAGACTGCAGTGCCAACTCAGGAACCAATTTGCCCAACCC ACAGTATACTACTGCTGAACAACTGGCAACTCGGCACTCTTTATCTTTAGCCCTTGATATGCCATTCAAAAAGTTAACTA CTCCTGGAATTTCTGCTCCTGTTAGGACATCCGCATCAATTAAAAATCAAGTTCAGCCTTGTACTTCTAAGGTGGTTTCC ACAGTTCAGAGTAGTTCTGTACCACCTCAGCATCCATCTCAACAAGTTTTGTTGGGATCCGCAAAATCTAAATTAACATC AGAAAATCCAGTCTCAAAGTGTAATCCAGTTTCAGATCCTGTGTTAAAATCTACCACAATTCATTCTGGTGCAAAGGTTG TTCCACGATCTATTGCTGTATCACAATTTAAGGGTGTTCAAGTAAGAAACATGGTAGGTAGTGTGCCTGCAGGTAGCTGT CTGACAAAGACACCCATTTCTGCTGGTTTGCCTTCTGACATAAAGGATAAACATGTTTCTTCCGGGGTTGGTGGAGCTTT GCCAAAGCAAGAAGTTAATCCGACTAAAGATTGTAGAGTTTCTAATGTTGGTTCCATTCCAAAAGAGAAGGCAAGAGAAG TCGGCACTCCTGTGGTCACTGCTCGGTGTCAAGTTGATGGCAATCCGGATAAGGGGCGAGTAGATGTAGTTAAACCCAAG AGCATGCCTCCTATAAAAGTTGCAGGTGAAAAAATTTCACAACCTAAAGCAGTCCCACAAAATACAGGAGGGTGTGTAGA GCAGGGAAGTGTTAAGAATTCAAACTTCACCCCCAAGACAGAGACTACTGAGAATGAGAATGGCAAACTGCATAAAGAAG GTCAAGATTCAGAACAAGATAAGAGGAAAAATTCAATTAGTGGAAGTTCTGATAATCAAAACACAAATGTGAAGCATGTA AATCTGCCAACACAAGATCAATGCAAGCAAAATTTGGAACCTCCCAAGATAGTTAAAAGTGAAAACTGA
Protein sequence (LotjaGi1g1v0345800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPTSGTKCNKLSFSEEDAATLTERYDTTTVLTLLQEIANYPHTKIDWNELVKKTSTGISNAREYQMLWRHLAYRDALPEK FEDGAQPLDDDSDLDCELEALPPVSEESALEAAACVKVMVASCTFSESTPTSSTIEAPLTIHVPVCHSSRTPNETSQPSN LMERTTMTFPVTVPRQTLPTISSTDGIETKGNIGGNLASKRKRKQWSEEEDMQLRAAVQRFGEGNWATMAKGDNFPIKRS ATQLAQRWSTLRKKDCSANSGTNLPNPQYTTAEQLATRHSLSLALDMPFKKLTTPGISAPVRTSASIKNQVQPCTSKVVS TVQSSSVPPQHPSQQVLLGSAKSKLTSENPVSKCNPVSDPVLKSTTIHSGAKVVPRSIAVSQFKGVQVRNMVGSVPAGSC LTKTPISAGLPSDIKDKHVSSGVGGALPKQEVNPTKDCRVSNVGSIPKEKAREVGTPVVTARCQVDGNPDKGRVDVVKPK SMPPIKVAGEKISQPKAVPQNTGGCVEQGSVKNSNFTPKTETTENENGKLHKEGQDSEQDKRKNSISGSSDNQNTNVKHV NLPTQDQCKQNLEPPKIVKSEN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 430 | 430 | 7.5E-181 | – | |
| PANTHER | 1 | 430 | 430 | 7.5E-181 | – | |
| MobiDBLite | 177 | 208 | 32 | - | – | |
| Gene3D | 196 | 260 | 65 | 2.6E-16 | – | |
| ProSiteProfiles | 198 | 256 | 59 | 15.559 | ||
| SUPERFAMILY | 201 | 255 | 55 | 1.65E-11 | ||
| SMART | 202 | 254 | 53 | 1.4E-10 | ||
| Pfam | 203 | 251 | 49 | 7.8E-9 | ||
| CDD | 204 | 253 | 50 | 3.11122E-14 | – | |
| MobiDBLite | 487 | 582 | 96 | - | – | |
| MobiDBLite | 495 | 523 | 29 | - | – | |
| MobiDBLite | 524 | 545 | 22 | - | – | |
| MobiDBLite | 546 | 571 | 26 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of LotjaGi1g1v0345800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…