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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0347900 |
| Transcript ID | LotjaGi1g1v0347900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ubiquitin carboxyl-terminal hydrolase family protein; TAIR: AT4G24560.1 ubiquitin-specific protease 16; Swiss-Prot: sp|Q9SB51|UBP16_ARATH Ubiquitin carboxyl-terminal hydrolase 16; TrEMBL-Plants: tr|A0A0B2PIM3|A0A0B2PIM3_GLYSO Ubiquitin carboxyl-terminal hydrolase 16; Found in the gene: LotjaGi1g1v0347900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:81613488..81622052) extracted from Lotus japonicus Gifu genome v1.2.
CTCTCTCTCTCTCTCTCTCTTTCTCTATTTTTTTATTCGAACGGAACGAACCGAATTGCTTGTAGTCATTGTCCGAATCT AACCACGAGACTTGCGTTTCGCACATTCGCTCCGTCCTTTTCAATTTTCAGTAAGCATCTTGAGTTTACTTGCGAACACG GAACAACACAACAATGCAATTCTCATCTTCCAAATTCGACTCTCCTCGTTAATCTCACCGCCACGGCCTTCTGCGCCGCC GTAACCGTCACCGTCCGATCAACGCAACCGCCGAGACTGGGTTTGACTTGAGGGGACTTCTCTCGGTGATGTAGTAGCGT GTTAGCGGTGTGTCGCTGGATGTGTGAGGGGGGATAAATGCGTGTCACCGGGGATCTAGGGTTTTCGAGCCTGGTCCTTG TGGTGGTGGTGGTTGTTTGCGCCGTGATCGGTTTCGTGATTCGCCGGAAATGGCAGCTGTCGGTGGCTAGAAGCGAGGAG ATCCAGAGGCTGTTGATTCTTGCTGCGGAGGAAACTGCCAGGGTTGAGAGAGAGGCTTCGTTTGTGTACGGCGAGGTGGT GGATTCTGCTGCGCATAACAACCATCAATGCGCTCTCTGCTATTTCCCCGCCACCAAGCGTTGCGCTCAGTGCAAATCCG TTCGTTACTGGTGCGTTTTCCCTCCAAAATTTCCCCCTTCTTTTTTTTGTTCCTGCTATCTAGAGGTTCGAATTATCCAA ACTGTGTTGAACAGTTCAACTTTTTCTCCCTTTCTTGATGTGGCTTGGATTCTGGTTTTCTCTCATGATTACTAACTTAT TTTATAAATTATGTTAATTTTGATGTTGTTAGCTTGAGTGTATCCATGGTTTGATGCTTGATATTGCTGAAATTGCGGAG AAATGTGGTTGATGCAGCTCTGTAATTGCAGTTTTGATGCTATTGGAGAGAACTCTGAAACCTTGATTTTGAGTACCATA ATGGGTTAAAATTAAATTTATATTTAGTTAGTATGATCTACAAAGATAAATATACAAAATCGCTGGGAGCTCCTCCGCAG TGTGTCTCATTCTTGAACATAATTAACGCGCATGAGATGGGATCAGTTGGCTGTTTCTTTGTATACAATGATCTTTATTG CTAGTAAAAATAAAACTCATCCTGCAACTTTTGGTAGCGGCTCGAGATTGTGGTTGCAGATGTTTTTAATATAGAGTGCT TTTGAAAGAAAAAGGTTTCTTCATTGTTTTTTGTTCTCTAGTTTGGAGAATAGGTTTTGATGACCCCATTTACATATTGT GTTGAATGATTGAGGCATTGAGCTGGCTGTGAATCTGTATAATTGGGTTTTCGTTGCATTGCTTCACTTCTACGTATTTC TGTCTGTGTACTTTTGTAAGGATAATATGTCTGTCTCAGATATGTTAGCTTTTCATGTTTTTCAGTTCTTCTGAGTGTCA AACAGTTCATTGGCGTCAAGGTCACAAATTTGAGTGTCATCTTCCCAGCAAAACTCACCAGAGTGATGATGTGATAAGTG ATCTTCGCAAGAAGGTAGCAGAGAAAGACTACTCTGGAATCCATTGTGAGAAGTCTGAAATTGAAGGTACAGAACATAAA ACATACTCGGGAAGATTCTCGGTTTCTGATATCGGCTTTTCTCCTGAAGTTTCATTAGGAAAGGATGATGATGTTAGAGT TGAGTCCCTTGCAGAGGCAAATCTAACCGATTCTAATTCTGAATTATCCAGTAACTCATTTTCTGGATTCTCTGCTTCCC CAAGTTCTAGTGATTCATCTGATGATTCCTCTACCTGTGAGAGTGTCATCTCAAATGAGCATGAGAAATCAGAGGCCCAT ACTTTTGTTGTTTCATCCCTTGATATTCCTGATAAAACTTCAGGTCATAATGGCATGGGTGAAGTCATGTCTTCTTCACC AAAGTTTGCAAGTTTGGTTGATTCTGTAGATGATTTTTCCACAATGCACAAATTAAATCATATTACACCTGGTTTTAGTA AAGAAGAGAGGAAGCTTGCATCAAATGTGACTTCAGGCTTGAGTATGTCAAAGGGGACGAAAATTGAGAATTCTACAGTG GATTCTGGATTTTGGGATAAAACTCTTGATTTGAGAGGGATTAAAGCTAATGCTAATGATGACACCATTGATAAGACTGA TCCTGGATCTTCATTTCACTTTTCATTCAGTGGCATACCTCCTTTGCATGTACTAGGGACCAAGGCAAAGGATTCTGTGC CTAATGATTCTTTTCCAAACTCTGTTAGAAACAATTTGCCACTACCAGGATCAGTATCATCAGCGAATGACAGCGTGAAT TCTTCAAAGATGAGGAATCTCTCTGTGATCAACAGCAAAGAGTCCAATGTTATGAGCCATAATACTCCTATCTGTTCTGA GTCTAATCAATTGGAATCTCAAGACAGCTCTGGGCCACCTTTACCTTCTTTCTCCTCTCAATCCTCTAGTGTTGGCAAAA ATTCAGTTTGTGCAGATGCTTTTAGCATCCATAACTCGCAATCAGCTGGCTCAAAGGTATCAAATCGTGTTGTGGAAAAC CATGGAAGCACCCTGAAGTCCACTGATATTAGAAGCCTGACAGGTGAACCTGATTCTAATTTAGCTTCTAGAACTGAAAG GCACTCACATTCCAGTATGAAACATGGGAAGAATGGCATTGAATCTGGCACTTCCTCCAAGGTTGCTAACTGTTCTGCAA ATTCTAAGAGCGGCTTGAAAATGTCTGTATTGAAAGTAGTTGATCAGTTTAGGGGATCCAATTTGTCAAAGCACTTCCCA CTAGCTGTCGGTAATGATATTGCTGGAAGATACAATGACAAGGTTCGTCTAGAACAGATCTTTTTGTGTTATTATTTTTG GCCTCGAAGCACTGTAACCTTACTTCTGTAGTTGTTACAGGGTATTTTTCCATATGAATTATTTGTCAAGCTTTATAACT TGAACAAGGTGGAGTCGCGCCCATTTGGTCTTATAAATTGTGGAAACAGGTAATTTGAAATTATTTATGATAAACAGTGC TAGAGGATAAATACTTCATGCTTGTAGGTGGGATTATATGTTTGCCATATATTTAAGGGGGGTGTATATTTTTCTTTTCT TGCCAATAAGGATTGGATTTTTTTCCCCGTTTTGTTAAAAAAATAATATGAATGGTCAGGCTGTTGAATTTTCCTGTAAA ATCAATTTCTCTTAAACATTGTTCTGTGTAGAATTTTCTATTTGATTTTTAAAATTATTATCCTCTGTTTTTGCAGTTGT TATGCTAATGCTGTTCTTCAGTGCTTAGCATTTACACCACCTCTGACTGCTTATTTGCTTCAAGGACTGCATTCTAAATC ATGTATGTATGCAATCAGAGTTTCCAACCTTGAATTGTCACGTGCTTTATCACTCTAGTACCACCTATTGTGACTGTTTC CCGGGGTAAAATATTTCCTATGTAAATTTCAGGTGCAAATAAAAAAAGGTGTTTCACCTGTGAATTTGAAAGCTTGATTT TGAAGTCAAAGGACACGAAATCTCCCCTGTCTCCTATTGGCATACTCTCTCAATTACAGAGCATTGGGAGTCAGCTTGGC AATGGCAGAGAAGAAGATGCACATGAATTTCTGAGGTATTTTTCACGAGTGATACTGTATGGCACAAAAAATTTGATGCA AAAGAGCTATGAATTTCAGTACAATCTATCATAAAATTTAAAAAACTAAGAAACAATCACCATTTACTGTGGAGTTAGTT TGAGGAATGGACTGCCACATAGTTTTGTCTAGTGTTACAACAATCTTGCCCCCAAGCATTGTTGTTTGATAAGAACCTTG GGAGAACCACACCACAAAAGCTAGCTGTTGTAGTTGGAGAGCCCAAGGCCTTATAAACCCCACATTAGAATCCCATACTT CCAATGTGGGACTCAAGTCCCATACCTTGCAATGGGGTCCTAACATCCCACCACGCTCCGCAGCCCCGGCGCCCACGCGG GCTGGCTGTGCACTAGCCCCACGACTAGTCCCGGGCGAACACTGCAATGCCGGCGTCACCACCCGCGCCGCTCGTTTGCA GCTCAGAGACATGGTGGAAGGCTCTGATACCATTGATAAGAACCTTGGGAGAACCACACCACAAAAGCTAGCTGTTGTAG TTGGAGAGCCCAAGGCCTTATAAACCCCACATTAGAATCCCATACTTCCAATGTGGGACTCAAGTCCCATACCTTGCAAT GGGGTCCTAACATTGTTTTTCTCTCCTTTAAATCCCTGTAAGTTAATCATATTACACACTTGACAGGCATGCTATTGATA CAATGCAATCGGCTTGCCTTGTGGAAGCTGGGATTAAAGCATCAGGTTCATTGGAAGAAGACACAACTTTAATGGGTCTA ACATTTGGAGGCTACCTTAGATCAAAGGTAATCCTATATTTCTACCTGGAAAAGTATTGCCAACCTATCTGTTTTTTTTT TTCCTTTCCCCCAGGCATAGGTGAAATACAGTGTTGGCTGATTTTTGTAATAGATAAGTCATTCTTACTGCCATTATTGC ATCTCTTGATTGAAAGTAACAAGGACAATGAACATCCACCTCATATTTGACAGATAAAATGCATGAAATGTGGCGGGAAG TCTGAGCGTCACGAAAGGATGATGGATCTGACTGTTGAGATTGAAGGGGAGATAACCACCCTAGTGGAGGCCCTTCGGCG GTTTACAAGCACCGAGGCTTTGGATGGAGAAAACAAGTACCACTGTGACAGGTTGGTTGATTTTTGGGGTCCTCTTGAAA GCTTTCAATCCTATCATATGACAGGAACTTAGATTTGTTAATATGGAGACTAGTTACATCAGTTACATGCATGGTAGACT CTGGTGATCCCTCAACTAGAAATAAACCAAGACCAGTCATGAAAAAAAAGACTGACTGAGAAACTAGGGGAATTGGAAGT TTTTTTTAGGGAGTAATGGGGGTTAGGGCGTTTTGTGATTTGATCTGCAGCTTTTTGGGTGCTATGAACTGTCTCTTCAT TGTAAGAGACTAAGAGTTGGACGACTGAAGATTTCTAGTGTAGATTAAGTAAACAGGAATCAGGGTTTCCAAAAGAATTA GCTTTGAACTTTGCATAACAGGTCTTGGTGTTTGATTGCATTGAAGTTTTGGCATAAGAGGATATTGTGCATTTGCTGGC ATGACGTTAAATTGGATTAGAGGAAATATTTCATACCAAGGGTTCTTAATGGTGACATTAGAGTTTGATTTCTTCACAAG TTTACCTGTATCCAGTAAAAGGGAAGGACAGCCTCTCCCTCCCATATATATATATATATATAAAACTAATCCTGCTTCTT ATTAAGAAACATGATGATGACAAAAAGGGATGATAATACTTAAATGACTCTTATGTTGCAAAATAAGGGAAATGGTTAAG GCTTGTGCCAAATCCTGAGAGTCAGAGGAGCCTGTACATGGCAAACCTCCATTGGGCCTATATGAATCCTTTTCCTTTAG CAGTATTAAATCATGGGGAAATGCTTTAAATGATCTTTCAGTTAAATTGGTAAAGGAAAACCCCATTCATTGTTTTCTCT TTTTTCTTTGATTTCATTTCATCATGGCTGTTCATCCAAGTTTAGACCTGTGAAATATGGTACTGTGCTTTTCTTCCATT GATGATTGAACTGCGAGACAATATACCAATCAAGTGCCCAAAGTTGTTATTTATTATGGCTACCAAGCTGTGACACTAGC TTTTCACAAAATTTTGGGTTCTAACAGTAAAAAGGAAAAGTAATGCTATTGTTTTTACTCTTATTTTCCCCCGTTTGGCA TGCAATTGCTTCTGGAATATTATTTGGATTCTGGAGTAGTAGACTCAAATGATTTTCCTTATTACTAATTGACTATTTCT GTTTTAAGGTGTAAATCTTATGAGAAGGCCAAGAAGAAGCTGACAATTTCGGAGGCACCCAATGTTCTTACAATTGCATT AAAGAGATTTCAGGTACTTCACTCGTTGAATTCAAAGACAAGTTGTTCTTGTTCATATTTTCTGCAGCCTGTTACATAAA TTACCTTACATTTGTTGCTTATGTTTTGCAGTCCGGAAAATTTGGCAAACTCAACAAGCCTATTCAATTTCCTGAAATAC TTGACTTGGCACCTTTTGTGAGTGGGACTAGTGATAAATCACCCATATACAGATTGTATGGGGTAGTTGTTCACTTGGAT ATTATGAATGCTGCTTTCTCTGGTCACTATGTGTGCTATGTTAAGAATATTCAAAACAAGTGGTTCAAGGTTGATGACAG TGTGGTAAGTCTCTCAGTTTCCATTTGTTCCATATCTTCAGAGCAGTTCTCTTTTTTGTTTGGTTCTTCAATGTACTTCT CTATATTTTTGTTTTTCTTAATTAGTTGTTCATGGTCCTTTCTTACATGCATGTGCTGAGGGTTTCTATGATACCCTAAA CCCTAAACAAAAGCCTTAACCTTTGCATCTTCACAATAAAATTGTGAAATATTATCATCATGCAAGGTAGTCAAATGGCA ATGTTCTACAAAAAACTGTCAAGTTCCTGTCAGATGTATGTGAAAGAGTTCCTTCTGATGTGGGCATCCACAGAACTTAC TCAGAGTCTGGACTTGCTTAGTGACACTGATGATATCTTGTTTGTTTTGCAGGTGACAGCTGTTGAATCTGAGAGAGTGT TAACGAAAGGAGCTTATATGCTTTTTTATGCAAGGTAACCGACCTCATTTTTTTTGAATTGATTTATGATCTAATAAGTG GCTAATTTAATGGTTCAACCAAAATGGAATTCGTCATGATAAGAAATAGAGATTAATTTCTGTGCACTGACGGTGTAATT AAGTTTTACACAATCATTCAATCACAACCCTCTATTTTGTTAGCTCATAATTAATTTTGAATTTAATAATATTTAAAATA GGAAATGGAAGGATGTGATTGAATGGCATAGAAATTATTCTCGAAGAAATAATTGGATGGGACATAGGGTTCACAGGCTT AGTGCTTGAGCCAGCCAGGATTTACAACTGATATAATATTACATGTCACCATTTTATTTATTAATTTAATATTTATTGAC TATGATAATATTACAATTTACAACTGATAAATGAAGTTAATTATGTATGCTGTGATATATAAATAATAAATAATTATTAT ATGTATAATATACGTAGCAAATTTTATCATTATGGTACATTCATTTGAAAATTTATCATGAAATATAATACAAATGTAAT ATATCTCATCAATGAGTGTGTATAGTCCGACTGGCGTATTACGGTTATTCATCTCTTGCACTATTGCGGATAATCAGTAG TGCGGGTGGATTCAATCGATGTTTCTTTTGATTATATTGTTCTTGTCAGCTTCTCTGACCAGCTGAATCACCTTTCAGGT GCTCGCCAAGGGCTCCAAGATTAATCAGGAACAGGATACTATCCCCAGATTCGAAAAGCAAAGTCAATGGAAAGACTCTT GCAACGAAAGCAAGACATGTACCTATAAGTTCTGGTGCTGCTATGAGTAGTTCGATTTCTCCAGATGGCTCACCCGCTTT AGAGTCTTTCTATTCAAAGTTTCACCAACTGAAAGGGATTTTACAAGAAGACTCATCAAGTGATAGTTCATCCCTTTTCA GCAGCAATTCTGATGAAGGATCTTGCAGTACTGAAAGTAGGCGTGATTCAACCAGCATTGATGACTTCTCTGACTATATT TTTGGTGATTCAGGACGTGGCTGGAGTAGCCTGTGGAGGAATTCGGATTCTGACACATCGTCAACCTCCTCATCCCCCTT GAACTTCAGACATTCGCCCCTGTCGGATATGGACCGGTATGATTCAGTTTCTCCAGTTGCAACTGGTTTGCGAATTCCCA CAGGTTCAAGTTCTGAGATAGATGGTCCTTCACACAGGAGCAGAGAGATGGATGTTGAGAGGAAAGGGGTAGGTGACAGT TCACTGCATAGAAAGTTAGATAGTGGTAGGGTTAGCAGCAGCAGTAGTAGTAGTAGTAGTAGTAGTAGGGAGACTGACTC GTTTCTGAAACTAAGAACTGACCATTTTAATGATGTAAACACTAATTTATCATGTAGAAAATCAAGGAAGAGAACAGATT GAGTTTTAATCAATAGGCAGCTACGGTGCCGTACATAATGTAATCTTGGATGTGGCATTTCTTTTGGAAAGAAATTAGCT ACATCATTTTGCCAATAACTTACCATGATGTAGGTATAGATTGCTGTAACTATTTATAAAAGAAAATCACTGGAATTTAT AACGTAATAGTAATATAAATTCCAGTGGACTAAGAAAAACATATTCATAAATTAAAAAAGTTTCTCTACAAATTAATTTT AGAATATAAGGTTTTGTCTACTTTGGACTGGAAAAATATGATTAATTCACGAGTAACAAAGTTTATCTACAAATTAATTT TAAAATATAAAGAGCATATTGTAAATAAATATACTGAATGTTAATTGGAAAAACATGGTTCAGCATATAGTACTATGAGA CAGAG
CDS sequence (LotjaGi1g1v0347900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGTGTCACCGGGGATCTAGGGTTTTCGAGCCTGGTCCTTGTGGTGGTGGTGGTTGTTTGCGCCGTGATCGGTTTCGT GATTCGCCGGAAATGGCAGCTGTCGGTGGCTAGAAGCGAGGAGATCCAGAGGCTGTTGATTCTTGCTGCGGAGGAAACTG CCAGGGTTGAGAGAGAGGCTTCGTTTGTGTACGGCGAGGTGGTGGATTCTGCTGCGCATAACAACCATCAATGCGCTCTC TGCTATTTCCCCGCCACCAAGCGTTGCGCTCAGTGCAAATCCGTTCGTTACTGTTCTTCTGAGTGTCAAACAGTTCATTG GCGTCAAGGTCACAAATTTGAGTGTCATCTTCCCAGCAAAACTCACCAGAGTGATGATGTGATAAGTGATCTTCGCAAGA AGGTAGCAGAGAAAGACTACTCTGGAATCCATTGTGAGAAGTCTGAAATTGAAGGTACAGAACATAAAACATACTCGGGA AGATTCTCGGTTTCTGATATCGGCTTTTCTCCTGAAGTTTCATTAGGAAAGGATGATGATGTTAGAGTTGAGTCCCTTGC AGAGGCAAATCTAACCGATTCTAATTCTGAATTATCCAGTAACTCATTTTCTGGATTCTCTGCTTCCCCAAGTTCTAGTG ATTCATCTGATGATTCCTCTACCTGTGAGAGTGTCATCTCAAATGAGCATGAGAAATCAGAGGCCCATACTTTTGTTGTT TCATCCCTTGATATTCCTGATAAAACTTCAGGTCATAATGGCATGGGTGAAGTCATGTCTTCTTCACCAAAGTTTGCAAG TTTGGTTGATTCTGTAGATGATTTTTCCACAATGCACAAATTAAATCATATTACACCTGGTTTTAGTAAAGAAGAGAGGA AGCTTGCATCAAATGTGACTTCAGGCTTGAGTATGTCAAAGGGGACGAAAATTGAGAATTCTACAGTGGATTCTGGATTT TGGGATAAAACTCTTGATTTGAGAGGGATTAAAGCTAATGCTAATGATGACACCATTGATAAGACTGATCCTGGATCTTC ATTTCACTTTTCATTCAGTGGCATACCTCCTTTGCATGTACTAGGGACCAAGGCAAAGGATTCTGTGCCTAATGATTCTT TTCCAAACTCTGTTAGAAACAATTTGCCACTACCAGGATCAGTATCATCAGCGAATGACAGCGTGAATTCTTCAAAGATG AGGAATCTCTCTGTGATCAACAGCAAAGAGTCCAATGTTATGAGCCATAATACTCCTATCTGTTCTGAGTCTAATCAATT GGAATCTCAAGACAGCTCTGGGCCACCTTTACCTTCTTTCTCCTCTCAATCCTCTAGTGTTGGCAAAAATTCAGTTTGTG CAGATGCTTTTAGCATCCATAACTCGCAATCAGCTGGCTCAAAGGTATCAAATCGTGTTGTGGAAAACCATGGAAGCACC CTGAAGTCCACTGATATTAGAAGCCTGACAGGTGAACCTGATTCTAATTTAGCTTCTAGAACTGAAAGGCACTCACATTC CAGTATGAAACATGGGAAGAATGGCATTGAATCTGGCACTTCCTCCAAGGTTGCTAACTGTTCTGCAAATTCTAAGAGCG GCTTGAAAATGTCTGTATTGAAAGTAGTTGATCAGTTTAGGGGATCCAATTTGTCAAAGCACTTCCCACTAGCTGTCGGT AATGATATTGCTGGAAGATACAATGACAAGGGTATTTTTCCATATGAATTATTTGTCAAGCTTTATAACTTGAACAAGGT GGAGTCGCGCCCATTTGGTCTTATAAATTGTGGAAACAGTTGTTATGCTAATGCTGTTCTTCAGTGCTTAGCATTTACAC CACCTCTGACTGCTTATTTGCTTCAAGGACTGCATTCTAAATCATGTGCAAATAAAAAAAGGTGTTTCACCTGTGAATTT GAAAGCTTGATTTTGAAGTCAAAGGACACGAAATCTCCCCTGTCTCCTATTGGCATACTCTCTCAATTACAGAGCATTGG GAGTCAGCTTGGCAATGGCAGAGAAGAAGATGCACATGAATTTCTGAGGCATGCTATTGATACAATGCAATCGGCTTGCC TTGTGGAAGCTGGGATTAAAGCATCAGGTTCATTGGAAGAAGACACAACTTTAATGGGTCTAACATTTGGAGGCTACCTT AGATCAAAGATAAAATGCATGAAATGTGGCGGGAAGTCTGAGCGTCACGAAAGGATGATGGATCTGACTGTTGAGATTGA AGGGGAGATAACCACCCTAGTGGAGGCCCTTCGGCGGTTTACAAGCACCGAGGCTTTGGATGGAGAAAACAAGTACCACT GTGACAGGTGTAAATCTTATGAGAAGGCCAAGAAGAAGCTGACAATTTCGGAGGCACCCAATGTTCTTACAATTGCATTA AAGAGATTTCAGTCCGGAAAATTTGGCAAACTCAACAAGCCTATTCAATTTCCTGAAATACTTGACTTGGCACCTTTTGT GAGTGGGACTAGTGATAAATCACCCATATACAGATTGTATGGGGTAGTTGTTCACTTGGATATTATGAATGCTGCTTTCT CTGGTCACTATGTGTGCTATGTTAAGAATATTCAAAACAAGTGGTTCAAGGTTGATGACAGTGTGGTGACAGCTGTTGAA TCTGAGAGAGTGTTAACGAAAGGAGCTTATATGCTTTTTTATGCAAGGTGCTCGCCAAGGGCTCCAAGATTAATCAGGAA CAGGATACTATCCCCAGATTCGAAAAGCAAAGTCAATGGAAAGACTCTTGCAACGAAAGCAAGACATGTACCTATAAGTT CTGGTGCTGCTATGAGTAGTTCGATTTCTCCAGATGGCTCACCCGCTTTAGAGTCTTTCTATTCAAAGTTTCACCAACTG AAAGGGATTTTACAAGAAGACTCATCAAGTGATAGTTCATCCCTTTTCAGCAGCAATTCTGATGAAGGATCTTGCAGTAC TGAAAGTAGGCGTGATTCAACCAGCATTGATGACTTCTCTGACTATATTTTTGGTGATTCAGGACGTGGCTGGAGTAGCC TGTGGAGGAATTCGGATTCTGACACATCGTCAACCTCCTCATCCCCCTTGAACTTCAGACATTCGCCCCTGTCGGATATG GACCGGTATGATTCAGTTTCTCCAGTTGCAACTGGTTTGCGAATTCCCACAGGTTCAAGTTCTGAGATAGATGGTCCTTC ACACAGGAGCAGAGAGATGGATGTTGAGAGGAAAGGGGTAGGTGACAGTTCACTGCATAGAAAGTTAGATAGTGGTAGGG TTAGCAGCAGCAGTAGTAGTAGTAGTAGTAGTAGTAGGGAGACTGACTCGTTTCTGAAACTAAGAACTGACCATTTTAAT GATGTAAACACTAATTTATCATGTAGAAAATCAAGGAAGAGAACAGATTGA
Protein sequence (LotjaGi1g1v0347900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRVTGDLGFSSLVLVVVVVVCAVIGFVIRRKWQLSVARSEEIQRLLILAAEETARVEREASFVYGEVVDSAAHNNHQCAL CYFPATKRCAQCKSVRYCSSECQTVHWRQGHKFECHLPSKTHQSDDVISDLRKKVAEKDYSGIHCEKSEIEGTEHKTYSG RFSVSDIGFSPEVSLGKDDDVRVESLAEANLTDSNSELSSNSFSGFSASPSSSDSSDDSSTCESVISNEHEKSEAHTFVV SSLDIPDKTSGHNGMGEVMSSSPKFASLVDSVDDFSTMHKLNHITPGFSKEERKLASNVTSGLSMSKGTKIENSTVDSGF WDKTLDLRGIKANANDDTIDKTDPGSSFHFSFSGIPPLHVLGTKAKDSVPNDSFPNSVRNNLPLPGSVSSANDSVNSSKM RNLSVINSKESNVMSHNTPICSESNQLESQDSSGPPLPSFSSQSSSVGKNSVCADAFSIHNSQSAGSKVSNRVVENHGST LKSTDIRSLTGEPDSNLASRTERHSHSSMKHGKNGIESGTSSKVANCSANSKSGLKMSVLKVVDQFRGSNLSKHFPLAVG NDIAGRYNDKGIFPYELFVKLYNLNKVESRPFGLINCGNSCYANAVLQCLAFTPPLTAYLLQGLHSKSCANKKRCFTCEF ESLILKSKDTKSPLSPIGILSQLQSIGSQLGNGREEDAHEFLRHAIDTMQSACLVEAGIKASGSLEEDTTLMGLTFGGYL RSKIKCMKCGGKSERHERMMDLTVEIEGEITTLVEALRRFTSTEALDGENKYHCDRCKSYEKAKKKLTISEAPNVLTIAL KRFQSGKFGKLNKPIQFPEILDLAPFVSGTSDKSPIYRLYGVVVHLDIMNAAFSGHYVCYVKNIQNKWFKVDDSVVTAVE SERVLTKGAYMLFYARCSPRAPRLIRNRILSPDSKSKVNGKTLATKARHVPISSGAAMSSSISPDGSPALESFYSKFHQL KGILQEDSSSDSSSLFSSNSDEGSCSTESRRDSTSIDDFSDYIFGDSGRGWSSLWRNSDSDTSSTSSSPLNFRHSPLSDM DRYDSVSPVATGLRIPTGSSSEIDGPSHRSREMDVERKGVGDSSLHRKLDSGRVSSSSSSSSSSSRETDSFLKLRTDHFN DVNTNLSCRKSRKRTD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 6 | 6 | - | – | |
| Phobius | 7 | 28 | 22 | - | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 29 | 1136 | 1108 | - | – | |
| PANTHER | 51 | 1127 | 1077 | 0.0 | – | |
| PANTHER | 51 | 1127 | 1077 | 0.0 | – | |
| Gene3D | 65 | 120 | 56 | 1.4E-12 | – | |
| SUPERFAMILY | 74 | 118 | 45 | 4.71E-11 | – | |
| ProSiteProfiles | 78 | 115 | 38 | 11.853 | ||
| Pfam | 78 | 115 | 38 | 7.4E-10 | ||
| MobiDBLite | 194 | 223 | 30 | - | – | |
| MobiDBLite | 194 | 240 | 47 | - | – | |
| MobiDBLite | 371 | 445 | 75 | - | – | |
| MobiDBLite | 477 | 523 | 47 | - | – | |
| MobiDBLite | 477 | 496 | 20 | - | – | |
| MobiDBLite | 497 | 511 | 15 | - | – | |
| Gene3D | 585 | 902 | 318 | 1.3E-88 | – | |
| SUPERFAMILY | 589 | 899 | 311 | 2.94E-85 | ||
| ProSiteProfiles | 592 | 897 | 306 | 52.105 | ||
| Pfam | 592 | 894 | 303 | 5.2E-46 | ||
| ProSitePatterns | 593 | 608 | 16 | - | ||
| MobiDBLite | 968 | 993 | 26 | - | – | |
| MobiDBLite | 968 | 984 | 17 | - | – | |
| MobiDBLite | 1017 | 1113 | 97 | - | – | |
| MobiDBLite | 1017 | 1034 | 18 | - | – | |
| MobiDBLite | 1065 | 1089 | 25 | - | – | |
| MobiDBLite | 1090 | 1109 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Ubiquitin-dependent protein catabolic process | The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein. | ||
| Biological process | Protein deubiquitination | The removal of one or more ubiquitin groups from a protein. | ||
| Molecular function | Thiol-dependent ubiquitinyl hydrolase activity | Catalysis of the thiol-dependent hydrolysis of an ester, thioester, amide, peptide or isopeptide bond formed by the C-terminal glycine of ubiquitin. |
Expression pattern of LotjaGi1g1v0347900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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