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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0350000 |
| Transcript ID | LotjaGi1g1v0350000.1 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | N-(5-phosphoribosyl)anthranilate isomerase; TAIR: AT1G07780.1 phosphoribosylanthranilate isomerase 1; Swiss-Prot: sp|Q42440|PAI1_ARATH N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic; TrEMBL-Plants: tr|G7JBT1|G7JBT1_MEDTR N-(5-phosphoribosyl)anthranilate isomerase; Found in the gene: LotjaGi1g1v0350000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:81999031..82001882) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAACACTAGTATATGTTGATGAATTAACAAAAGGTTGTTTAAAAAAAAAATTAACAAAAGGAGAGGAAAAGGACAAA GAGCAAATCTAGCATCAAAATTCAAAACGCACAGCCGTTTGCCGTTTAACAACTGCGGCCTCGTCCTCTTTCTTCACCGT CGTATTTGGTGGTTTCAGCAGCTGCTTCTCTTCTCTTTCTCACCGGGAAGTGACAACAACGAGTCCTCCATCACCCTTTC AAAGCCTCAATATGCTTTCAGGTTTCTTTTTCACCTGGTACTCATGCTGCCCAGTTTTTTTGGTGAATTTCATAGCTGAC ATGATTTTTTGATATTTCTTTCATAGTTTCTCTTTTATCCATTATGCTAATTTGCACAATCCACATTTTCATAAATCAAA CTACCTATCAGATTTTATGAGAATTTTTGTTCTGGCCTTGCTGGGGAAGCATTATTCTATTAATCTCTTTGTTCTATTAG CTTGATTGAAAAAAAAAACCAAATCACTTGTTTATTGTGCTTCTGAAATATGTGAACTTGTAGTCTGTACTGTACCATCT TGCTTTAACAATTCATTTATTCAGTAGGTAGGTACTGCATGCATTACATAAGGTTGTGTTACTACAAATTATTTGGCTGG TTTCTGTGGAGAACAAAGGATTCTTTGTGCTGACTGACCCCCCTGCAGCCATGAGCCATTGATAATTTTAAGGAATTACA AATCACCATTCTCCAAGTTTCTTATATTTAGTTTATCACGGGGTTGTTCTAGCTTAAGCATAAGTCTCACAGGTTCGAGT CCCTGTGAATACAGTTGAGTTAAATACTTAGTAGGGAGAGCTTTGCCTCCCAGAGAAGTCCTATCGGGCTCGAACATGAT TGCCTCATTGGAGGATACTTGTAGTTTAAACCAAAAAAAATTATAAGAGGAAATAGATGTTTATAGTTTGTAATGGCATT GTTCCTAATTATCTAAGTACTCCTCATCTTTTTCATTATACAATCATAAAGGAGTTGTGGTGTCTAAAACTTCGTTTTCT ATAAAAGCTTATTTTCTTGACAATTATGAAAAGGTCATAAGGCTGACCTACTTCTCTATAGTTTTCAAATTTATCTTGAA AGCTCGTATTTGACAATGAATCCTCCATGTGCTTTGTGCCTAATACTATGTTCGTTTGATGGTTCTGCTGACCTTGCAAG ATATGTTCTTTCTGTGTATAGGTTCAACTGCTGGGAGTCACTTGCAACATAGAGCTACAAATTTCCTCAAAAGACCAACT CTAGGTAATCTGATTCATTCATTCCGTTTGTATGCGAACCAAAAAGCACTTATTGGAACTTATCTAGTGCTCTTTTTAGT AGATAAGCTCCAACAAATGTTCTTTGACCCGCATCCAAACAAAATCTTTGTTTACTGAGTATAATGCCTTTCTTCTGTAT GTGTTTCAAGTTATTTGAAAACCAAACTAGCCCTTATTCCTCATGCAGACTTACTTTCATGTCTTTGCTTGCATTGAATA TGCAAGTGGACTGGGTCTGGGTTATAATTCATAGATGAGACACTAATAAAATGTTTGAACTTGTAATTTCTGTAGGTTTG AGAGGACAGAAGTTTCAATTTTCTAGCGTGAGGTTCTGTCTAAAGTATAAAGTTTCCTGCAAACTTGCTGAGTTGGGAAG TGATTCATGCTTGTCAAAGGAACTTGAAAAGAGTAAACCTCTGGTTAAGATGTGCGGCATTACATCAGCTAAAGATGCTG CTATGGCGGCCGAAGCTGGTGCAAACTTTATTGGAATGATTATGTGGCCGAATTCAAAACGTTCGGTTTCATTTTCTGTT GCCAAGGAGATATCAAAAGTTGCAAGAGATTATGGAGCAGAGCCTGTGGGAGTATTTGTGGATGATGATGCAGAAACAAT ATTAAGAGTTTCTGATGCCTCAAACCTTGAATATGTGCAGGTATATTTTTGCCTTGCCTTGATGTATTTTCTGTGACAGT TAAATGGTTGATCTCGTAATGTTTGGACAATGCAGCTTCATGGATCTGGTTCTCGGATAGCTTTCCCATCTTTAATTCAG GAAAATCGGGTAATATATGTTCTCCATGCAAATGAGGATGGGAGCCTTTTAAACATAATTTCTGATGAAGAGTGCTCTCT AGTTGATTGGGTTCTTGTAGATAGTGCCAAGGGTGGCAGGTTTTTATAACTTAACCCATCTGCATGTTAGATAATGAGGT TGTTTGAATGCGGACTAAAGAACACTTGTTGAAGCTTATCTACTAAAAAAAACACTAGATAAGCTCCAAAAAGTGCTCTC TGGTCCGCATCCAAACAGACTCAATCCTTTTTTTTCTTCATCGTAATATCTTGGAACTCATTAGAGTAATGTCTTTGCAG TGGCAAAGCGTTCGATTGGACGCAGTTTAAACTACCAAAAATTAGAAGTAAGCAAGGTTGGCTCTTAGCAGGAGGGATAA ATCCTGAGAATGTTTCTGAGGCTATATCTACCCTCAAACCTGAAGGGGTGGATGTAAGTACTGGCATTTGTGCATCAGAT GGCATCCAAAAGGATCAATCAAGAATAGCTTCCTTCATGAACGCAGTGCATTCTGTTCAGTATTGATTCACCATAAATTA TTATGAATCTCAAGTAAGTAAATGTTGTAATTTTGGACATATCTATATCTATATGATGTCTTGTTACAATTTGGTTATCA AATCCAATAATATCAACCAAGAGGCTTGTGTACTCATTACAAGATCACAAAGGACTGATATTACTTAGTTTCTACTTTTC TCCTACACAAAGATACTAATAGTTTGACCTTTGCTTTACAAAAGCCTAACCA
CDS sequence (LotjaGi1g1v0350000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTTCAGGTTCAACTGCTGGGAGTCACTTGCAACATAGAGCTACAAATTTCCTCAAAAGACCAACTCTAGGTTTGAG AGGACAGAAGTTTCAATTTTCTAGCGTGAGGTTCTGTCTAAAGTATAAAGTTTCCTGCAAACTTGCTGAGTTGGGAAGTG ATTCATGCTTGTCAAAGGAACTTGAAAAGAGTAAACCTCTGGTTAAGATGTGCGGCATTACATCAGCTAAAGATGCTGCT ATGGCGGCCGAAGCTGGTGCAAACTTTATTGGAATGATTATGTGGCCGAATTCAAAACGTTCGGTTTCATTTTCTGTTGC CAAGGAGATATCAAAAGTTGCAAGAGATTATGGAGCAGAGCCTGTGGGAGTATTTGTGGATGATGATGCAGAAACAATAT TAAGAGTTTCTGATGCCTCAAACCTTGAATATGTGCAGCTTCATGGATCTGGTTCTCGGATAGCTTTCCCATCTTTAATT CAGGAAAATCGGGTAATATATGTTCTCCATGCAAATGAGGATGGGAGCCTTTTAAACATAATTTCTGATGAAGAGTGCTC TCTAGTTGATTGGGTTCTTGTAGATAGTGCCAAGGGTGGCAGTGGCAAAGCGTTCGATTGGACGCAGTTTAAACTACCAA AAATTAGAAGTAAGCAAGGTTGGCTCTTAGCAGGAGGGATAAATCCTGAGAATGTTTCTGAGGCTATATCTACCCTCAAA CCTGAAGGGGTGGATGTAAGTACTGGCATTTGTGCATCAGATGGCATCCAAAAGGATCAATCAAGAATAGCTTCCTTCAT GAACGCAGTGCATTCTGTTCAGTATTGA
Protein sequence (LotjaGi1g1v0350000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLSGSTAGSHLQHRATNFLKRPTLGLRGQKFQFSSVRFCLKYKVSCKLAELGSDSCLSKELEKSKPLVKMCGITSAKDAA MAAEAGANFIGMIMWPNSKRSVSFSVAKEISKVARDYGAEPVGVFVDDDAETILRVSDASNLEYVQLHGSGSRIAFPSLI QENRVIYVLHANEDGSLLNIISDEECSLVDWVLVDSAKGGSGKAFDWTQFKLPKIRSKQGWLLAGGINPENVSEAISTLK PEGVDVSTGICASDGIQKDQSRIASFMNAVHSVQY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 30 | 275 | 246 | 2.2E-116 | – | |
| Gene3D | 64 | 275 | 212 | 6.8E-56 | ||
| Hamap | 66 | 273 | 208 | 30.167 | ||
| SUPERFAMILY | 67 | 272 | 206 | 1.73E-50 | ||
| CDD | 68 | 270 | 203 | 1.56902E-63 | ||
| Pfam | 68 | 268 | 201 | 1.7E-42 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Phosphoribosylanthranilate isomerase activity | Catalysis of the reaction: N-(5-phospho-beta-D-ribosyl)anthranilate = 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate. | ||
| Biological process | Tryptophan metabolic process | The chemical reactions and pathways involving tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid. |
Expression pattern of LotjaGi1g1v0350000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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