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IPR001240

Description

IPR001240 is a N-(5'phosphoribosyl) anthranilate isomerase (PRAI) domain.

<p>N-(5'-phosphoribosyl) anthranilate isomerase (PRAI) is an enzyme that catalyses the third step of tryptophan biosynthesis. This domain can also be found at the C terminus of several multifunctional enzymes such as tryptophan biosynthesis protein TrpCF, TRP1 and TrpC.</p> <p>Phosphoribosylanthranilate isomerase is monomeric and labile in most mesophilic microorganisms, but dimeric and stable in the hyperthermophile Thermotoga maritima (tPRAI) [[cite:PUB00006524]]. The comparison to the known 2.0 A structure of PRAI from Escherichia coli (ePRAI) shows that tPRAI has the complete TIM- or (β α)8-barrel fold, whereas helix alpha5 in ePRAI is replaced by a loop. The subunits of tPRAI associate via the N-terminal faces of their central β-barrels. Two long, symmetry-related loops that protrude reciprocally into cavities of the other subunit provide for multiple hydrophobic interactions. Moreover, the side chains of the N-terminal methionines and the C-terminal leucines of both subunits are immobilized in a hydrophobic cluster, and the number of salt bridges is increased in tPRAI. These features appear to be mainly responsible for the high thermostability of tPRAI [[cite:PUB00006375]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Phosphoribosylanthranilate isomerase activity Catalysis of the reaction: N-(5-phospho-beta-D-ribosyl)anthranilate = 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate.
Biological process Tryptophan metabolic process The chemical reactions and pathways involving tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.

Associated Lotus transcripts 12

Transcript Name Description Predicted domains Domain count
PREDICTED: n-(5'-phosphoribosyl)anthranilate isomerase-like [Glycine max] gi|356568244|ref|XP_003552323.1| 10
PREDICTED: n-(5'-phosphoribosyl)anthranilate isomerase-like [Glycine max] gi|356568244|ref|XP_003552323.1| 10
N-(5-phosphoribosyl)anthranilate isomerase; TAIR: AT1G07780.1 phosphoribosylanthranilate isomerase 1; Swiss-Prot: sp|Q42440|PAI1_ARATH N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic; TrEMBL-Plants: tr|G7JBT1|G7JBT1_MEDTR N-(5-phosphoribosyl)anthranilate isomerase; Found in the gene: LotjaGi1g1v0350000 9
N-(5-phosphoribosyl)anthranilate isomerase; TAIR: AT1G07780.1 phosphoribosylanthranilate isomerase 1; Swiss-Prot: sp|Q42440|PAI1_ARATH N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic; TrEMBL-Plants: tr|G7JBT1|G7JBT1_MEDTR N-(5-phosphoribosyl)anthranilate isomerase; Found in the gene: LotjaGi1g1v0350000 10
N-(5-phosphoribosyl)anthranilate isomerase; TAIR: AT1G07780.1 phosphoribosylanthranilate isomerase 1; Swiss-Prot: sp|Q42440|PAI1_ARATH N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic; TrEMBL-Plants: tr|G7JBT1|G7JBT1_MEDTR N-(5-phosphoribosyl)anthranilate isomerase; Found in the gene: LotjaGi1g1v0350000 10
N-(5-phosphoribosyl)anthranilate isomerase; TAIR: AT1G07780.1 phosphoribosylanthranilate isomerase 1; Swiss-Prot: sp|Q42440|PAI1_ARATH N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic; TrEMBL-Plants: tr|G7JBT1|G7JBT1_MEDTR N-(5-phosphoribosyl)anthranilate isomerase; Found in the gene: LotjaGi1g1v0350000 10
N-(5-phosphoribosyl)anthranilate isomerase; TAIR: AT1G07780.1 phosphoribosylanthranilate isomerase 1; Swiss-Prot: sp|Q42440|PAI1_ARATH N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic; TrEMBL-Plants: tr|G7JBT1|G7JBT1_MEDTR N-(5-phosphoribosyl)anthranilate isomerase; Found in the gene: LotjaGi1g1v0350000 10
N-(5-phosphoribosyl)anthranilate isomerase; TAIR: AT1G07780.1 phosphoribosylanthranilate isomerase 1; Swiss-Prot: sp|Q42440|PAI1_ARATH N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic; TrEMBL-Plants: tr|G7JBT1|G7JBT1_MEDTR N-(5-phosphoribosyl)anthranilate isomerase; Found in the gene: LotjaGi1g1v0350000 10
N-(5-phosphoribosyl)anthranilate isomerase; TAIR: AT1G07780.1 phosphoribosylanthranilate isomerase 1; Swiss-Prot: sp|Q42440|PAI1_ARATH N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic; TrEMBL-Plants: tr|G7JBT1|G7JBT1_MEDTR N-(5-phosphoribosyl)anthranilate isomerase; Found in the gene: LotjaGi1g1v0350000 10
N-(5-phosphoribosyl)anthranilate isomerase; TAIR: AT1G07780.1 phosphoribosylanthranilate isomerase 1; Swiss-Prot: sp|Q42440|PAI1_ARATH N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic; TrEMBL-Plants: tr|I1MZ16|I1MZ16_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0076200 9
N-(5'-phosphoribosyl)anthranilate isomerase; TAIR: AT1G07780.1 phosphoribosylanthranilate isomerase 1; Swiss-Prot: sp|Q42440|PAI1_ARATH N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic; TrEMBL-Plants: tr|G7JBT1|G7JBT1_MEDTR N-(5-phosphoribosyl)anthranilate isomerase; Found in the gene: LotjaGi6g1v0076200 9
N-(5'-phosphoribosyl)anthranilate isomerase; TAIR: AT1G07780.1 phosphoribosylanthranilate isomerase 1; Swiss-Prot: sp|Q42440|PAI1_ARATH N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic; TrEMBL-Plants: tr|G7JBT1|G7JBT1_MEDTR N-(5-phosphoribosyl)anthranilate isomerase; Found in the gene: LotjaGi6g1v0076200 9

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd00405 CDD 1 8.33