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GO:0006568

View this GO term in other databases

Overview

Field Value
Namespace Biological process
Short description Tryptophan metabolic process
Full defintion The chemical reactions and pathways involving tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.
Subterm of

Relationships

The relationship of GO:0006568 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
ISBN
Oxford Dictionary of Biochemistry and Molecular BiologyOxford Dictionary of Biochemistry and Molecular Biology

Anthony David Smith · ISBN: 0198547684

Oxford University Press, USA, 1997 · 762 pages

Arranged in A-to-Z order, the more than 17,000 entries provide basic information about fundamental, physiochemical laws, chemical compounds, constants, and formulae. The Dictionary also describes the essential features of some 2,000 enzymes and proteins, the reactions they catalyze and the functions they perform. These entries also include filenames to facilitate the location of entries in databases of sequences and definitions of 950 abbreviations and symbols. Designed for students, teachers, researchers and other professionals in any area of the biomedical sciences, the Dictionary has been fully updated anf revised to incorporate new information discovered since the original edition was published in 1997.

Associated Lotus transcripts 28

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0127829.1
– PREDICTED: n-(5'-phosphoribosyl)anthranilate isomerase-like [Glycine max] gi|356568244|ref|XP_003552323.1|
GO terms
2
Lj0g3v0362709.1
– PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like [Cicer arietinum] gi|502128685|ref|XP_004500046.1|
GO terms
2
Lj1g3v4450430.1
– PREDICTED: indole-3-glycerol phosphate lyase, chloroplastic [Glycine max] gi|356572236|ref|XP_003554276.1|
GO terms
2
Lj2g3v2843800.1
– Indole-3-glycerol phosphate synthase [Medicago truncatula] gi|357492951|ref|XP_003616764.1|
GO terms
2
Lj3g3v2780540.1
– PREDICTED: LOW QUALITY PROTEIN: tryptophan synthase beta chain 2-like [Cicer arietinum] gi|502148742|ref|XP_004507251.1|
GO terms
2
Lj6g3v0508400.1
– PREDICTED: n-(5'-phosphoribosyl)anthranilate isomerase-like [Glycine max] gi|356568244|ref|XP_003552323.1|
GO terms
2
Lj6g3v0896480.1
– PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like [Glycine max] gi|356567382|ref|XP_003551899.1|
GO terms
2
LotjaGi1g1v0070800.1
– Indole-3-glycerol phosphate synthase; TAIR: AT5G48220.1 Aldolase-type TIM barrel family protein; Swiss-Prot: sp|P49572|TRPC_ARATH Indole-3-glycerol phosphate synthase, chloroplastic; TrEMBL-Plants: tr|G7KH34|G7KH34_MEDTR Indole-3-glycerol phosphate synthase; Found in the gene: LotjaGi1g1v0070800
GO terms
2
LotjaGi1g1v0070800.2
– Indole-3-glycerol phosphate synthase; TAIR: AT5G48220.1 Aldolase-type TIM barrel family protein; Swiss-Prot: sp|P49572|TRPC_ARATH Indole-3-glycerol phosphate synthase, chloroplastic; TrEMBL-Plants: tr|A0A072UF41|A0A072UF41_MEDTR Indole-3-glycerol phosphate synthase; Found in the gene: LotjaGi1g1v0070800
GO terms
2
LotjaGi1g1v0350000.1
– N-(5-phosphoribosyl)anthranilate isomerase; TAIR: AT1G07780.1 phosphoribosylanthranilate isomerase 1; Swiss-Prot: sp|Q42440|PAI1_ARATH N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic; TrEMBL-Plants: tr|G7JBT1|G7JBT1_MEDTR N-(5-phosphoribosyl)anthranilate isomerase; Found in the gene: LotjaGi1g1v0350000
GO terms
2
LotjaGi1g1v0350000.2
– N-(5-phosphoribosyl)anthranilate isomerase; TAIR: AT1G07780.1 phosphoribosylanthranilate isomerase 1; Swiss-Prot: sp|Q42440|PAI1_ARATH N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic; TrEMBL-Plants: tr|G7JBT1|G7JBT1_MEDTR N-(5-phosphoribosyl)anthranilate isomerase; Found in the gene: LotjaGi1g1v0350000
GO terms
2
LotjaGi1g1v0350000.3
– N-(5-phosphoribosyl)anthranilate isomerase; TAIR: AT1G07780.1 phosphoribosylanthranilate isomerase 1; Swiss-Prot: sp|Q42440|PAI1_ARATH N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic; TrEMBL-Plants: tr|G7JBT1|G7JBT1_MEDTR N-(5-phosphoribosyl)anthranilate isomerase; Found in the gene: LotjaGi1g1v0350000
GO terms
2
LotjaGi1g1v0350000.4
– N-(5-phosphoribosyl)anthranilate isomerase; TAIR: AT1G07780.1 phosphoribosylanthranilate isomerase 1; Swiss-Prot: sp|Q42440|PAI1_ARATH N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic; TrEMBL-Plants: tr|G7JBT1|G7JBT1_MEDTR N-(5-phosphoribosyl)anthranilate isomerase; Found in the gene: LotjaGi1g1v0350000
GO terms
2
LotjaGi1g1v0350000.5
– N-(5-phosphoribosyl)anthranilate isomerase; TAIR: AT1G07780.1 phosphoribosylanthranilate isomerase 1; Swiss-Prot: sp|Q42440|PAI1_ARATH N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic; TrEMBL-Plants: tr|G7JBT1|G7JBT1_MEDTR N-(5-phosphoribosyl)anthranilate isomerase; Found in the gene: LotjaGi1g1v0350000
GO terms
2
LotjaGi1g1v0350000.6
– N-(5-phosphoribosyl)anthranilate isomerase; TAIR: AT1G07780.1 phosphoribosylanthranilate isomerase 1; Swiss-Prot: sp|Q42440|PAI1_ARATH N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic; TrEMBL-Plants: tr|G7JBT1|G7JBT1_MEDTR N-(5-phosphoribosyl)anthranilate isomerase; Found in the gene: LotjaGi1g1v0350000
GO terms
2
LotjaGi1g1v0350000.7
– N-(5-phosphoribosyl)anthranilate isomerase; TAIR: AT1G07780.1 phosphoribosylanthranilate isomerase 1; Swiss-Prot: sp|Q42440|PAI1_ARATH N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic; TrEMBL-Plants: tr|G7JBT1|G7JBT1_MEDTR N-(5-phosphoribosyl)anthranilate isomerase; Found in the gene: LotjaGi1g1v0350000
GO terms
2
LotjaGi1g1v0714100.1
– TRYPTOPHAN SYNTHASE ALPHA CHAIN family protein; TAIR: AT4G02610.1 Aldolase-type TIM barrel family protein; Swiss-Prot: sp|O22765|TRPA1_ARATH Tryptophan synthase alpha chain; TrEMBL-Plants: tr|I3S0A7|I3S0A7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0714100
GO terms
2
LotjaGi1g1v0714100.2
– TRYPTOPHAN SYNTHASE ALPHA CHAIN family protein; TAIR: AT4G02610.1 Aldolase-type TIM barrel family protein; Swiss-Prot: sp|O22765|TRPA1_ARATH Tryptophan synthase alpha chain; TrEMBL-Plants: tr|I3S0A7|I3S0A7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0714100
GO terms
2
LotjaGi2g1v0059100.1
– Tryptophan synthase beta chain; TAIR: AT5G38530.1 tryptophan synthase beta type 2; Swiss-Prot: sp|Q8Q001|TRPB2_METMA Tryptophan synthase beta chain 2; TrEMBL-Plants: tr|A0A072U669|A0A072U669_MEDTR Tryptophan synthase beta chain; Found in the gene: LotjaGi2g1v0059100
GO terms
2
LotjaGi2g1v0059100.2
– Tryptophan synthase beta chain; TAIR: AT5G38530.1 tryptophan synthase beta type 2; Swiss-Prot: sp|Q8Q001|TRPB2_METMA Tryptophan synthase beta chain 2; TrEMBL-Plants: tr|A0A072U669|A0A072U669_MEDTR Tryptophan synthase beta chain; Found in the gene: LotjaGi2g1v0059100
GO terms
2
LotjaGi2g1v0457700.1
– Tryptophan synthase, beta chain; TAIR: AT5G28237.1 Pyridoxal-5'-phosphate-dependent enzyme family protein; Swiss-Prot: sp|O50046|TRPB_CAMAC Tryptophan synthase beta chain 2, chloroplastic; TrEMBL-Plants: tr|A0A0S3T6G8|A0A0S3T6G8_PHAAN Tryptophan synthase; Found in the gene: LotjaGi2g1v0457700
GO terms
2
LotjaGi6g1v0076200.1
– N-(5-phosphoribosyl)anthranilate isomerase; TAIR: AT1G07780.1 phosphoribosylanthranilate isomerase 1; Swiss-Prot: sp|Q42440|PAI1_ARATH N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic; TrEMBL-Plants: tr|I1MZ16|I1MZ16_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0076200
GO terms
2
LotjaGi6g1v0076200.2
– N-(5'-phosphoribosyl)anthranilate isomerase; TAIR: AT1G07780.1 phosphoribosylanthranilate isomerase 1; Swiss-Prot: sp|Q42440|PAI1_ARATH N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic; TrEMBL-Plants: tr|G7JBT1|G7JBT1_MEDTR N-(5-phosphoribosyl)anthranilate isomerase; Found in the gene: LotjaGi6g1v0076200
GO terms
2
LotjaGi6g1v0076200.3
– N-(5'-phosphoribosyl)anthranilate isomerase; TAIR: AT1G07780.1 phosphoribosylanthranilate isomerase 1; Swiss-Prot: sp|Q42440|PAI1_ARATH N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic; TrEMBL-Plants: tr|G7JBT1|G7JBT1_MEDTR N-(5-phosphoribosyl)anthranilate isomerase; Found in the gene: LotjaGi6g1v0076200
GO terms
2
LotjaGi6g1v0162700.1
– Tryptophan synthase beta chain; TAIR: AT4G27070.1 tryptophan synthase beta-subunit 2; Swiss-Prot: sp|P25269|TRBP2_ARATH Tryptophan synthase beta chain 2, chloroplastic; TrEMBL-Plants: tr|I1N0T6|I1N0T6_SOYBN Tryptophan synthase; Found in the gene: LotjaGi6g1v0162700
GO terms
2
LotjaGi6g1v0162700.2
– Tryptophan synthase beta chain; TAIR: AT4G27070.1 tryptophan synthase beta-subunit 2; Swiss-Prot: sp|O50046|TRPB_CAMAC Tryptophan synthase beta chain 2, chloroplastic; TrEMBL-Plants: tr|A0A0L9V8L9|A0A0L9V8L9_PHAAN Tryptophan synthase; Found in the gene: LotjaGi6g1v0162700
GO terms
2
LotjaGi6g1v0166000.2
– Tryptophan synthase beta chain; TAIR: AT4G27070.1 tryptophan synthase beta-subunit 2; Swiss-Prot: sp|O50046|TRPB_CAMAC Tryptophan synthase beta chain 2, chloroplastic; TrEMBL-Plants: tr|I3S5I7|I3S5I7_LOTJA Tryptophan synthase; Found in the gene: LotjaGi6g1v0166000
GO terms
2
LotjaGi6g1v0166000.3
– Tryptophan synthase beta chain; TAIR: AT4G27070.1 tryptophan synthase beta-subunit 2; Swiss-Prot: sp|O50046|TRPB_CAMAC Tryptophan synthase beta chain 2, chloroplastic; TrEMBL-Plants: tr|I3S5I7|I3S5I7_LOTJA Tryptophan synthase; Found in the gene: LotjaGi6g1v0166000
GO terms
2

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0006568
Biological process Tryptophan metabolic process 1 3.57