Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0353900 |
| Transcript ID | LotjaGi1g1v0353900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dihydroflavonol-4-reductase; TAIR: AT4G33360.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|P73212|DFRA_SYNY3 Putative dihydroflavonol 4-reductase; TrEMBL-Plants: tr|G7J6B7|G7J6B7_MEDTR NAD(P)-binding rossmann-fold protein; Found in the gene: LotjaGi1g1v0353900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:82572708..82575105) extracted from Lotus japonicus Gifu genome v1.2.
AAAAGCCAAACAACCTATTAAATCTAGACTTTTTTTTCCTCACAACTTTATCTCTACTTAATTTTCTCTCTCTCACTTAC TTGCTCTTCTATACCAAACAAACTCTTAAGAGAAGAAGGTGCAAAAGGAATAGGTGGGACAAGTTGGTAAACGGTGCTGA CGGGAGTCAAAGTCAGGAGGAGGTTCAGAACATTGACTTTTCTGGTAAAGAATTCAGTGAGTGAGAAAATGAACAAGGTA TTGGTCACCGGAGCAACCGGTTACCTCGGAGGAAGGCTCTGTCACGCGCTTCTCCGACAAGGTTACTCCGTCAGGATCCT CGCCAGACGCACCAGCGATCTCTCCGCCCTTCCACCGCCTTCCGAGATCTTCTACGGCGACATCACCGACTTTCCCTCTC TCCTCGCCGCCGTCTCCGGTTGCTCCGTCGTCTTCCACCTCGCCGCGCTCGTCGAGCCCTGGCTCCCTGATCCCTCTATA ATCTTCTCCGTAAGCTCCTTTTCACTCATTCATCATCAATAAATTCAACCCTGTTGTTGATTCAATCCGAAAATCGCTTT CAGGTCAACGTTGGAGGGTTGAAGAATGTGTTGGAGGCGGTGAAGCAGAGCAACACAGTGGAGAAACTCGTATACACGTC GTCGTTTTTTGCTCTTGGACCAACTGATGGAAGCATTGCCGATGAAAATCAAGTAACCGATTCAAAGTTATTTTTTCTTG CTTTTCGTTGATGGTGTGTTTGATTCTAAGAAACCCATTTTCTAATTTTAATTGCAGACCCATCACGAGAAATTTTTCTG CACTGAGTATGAGAAATCAAAGGTTGCTGCTGACAAGATTGCAATGCAAGCTGCGTCAGAGGGTATGCCTATAGTGTTGC TTTATCCTGGTGTAATCTATGGGCCTGGCAAGGTCACTGCAGGAAACGTTGTTGCAAGGATGGTAATCTTCTTTGCTTCT GTTCTGTTTTATCATATATGAATTTTGTTCTGTTTTATCATATCTACATGGTTATGCTTTTTTTTTTCTCTATATTGGAA GTGAAACTGAAAAGTGTGTTTTTATTTATTTTTGTTTCACTTGTAAGCTTGTAGAACGATTTTGTGGTCGATTACCTGGT TACATTGGCAGTGGGAATGATAAATTTTCGTTCAGCCATGTGGATGATGTGGTGGAGGGTCACATTGCAGCAATGGAGAA AGGAGAGCTTGGGAATAGGTATCTGCTGACGGGTGAAAATGCGTCGTTCAAGGAAATTTTTGACATGGCTGCTGTGATAA CTGATACTAGAAAACCAGTGATTAACATCCCTTTGTGGGTTATTGAAGTTTATGGCTGGATATCTGTTTTGGTTTCTCGA ATCACTGGCAAGTTACCCCTCATCAGTCCGCCGGTAAGCTCTTTTGTTTTAGCACTTCTTGAATCATTTAAGTGCATGTT TAGATACGCCTAATTGGAAGAAAAATTGATTTTGGGAGAAGTTACGCCTAATTAGTATTTGGAAACACTCTATGGTATGA TTTAAATTCACGGTAAGAGAAGCTCCAATATGTAGCTACTCTAGCTCACATTGCCTTGGATTCTACGCCAGAAGCTTTTC CAAACATACAACTAGTACCTCTTTGTAGGAGCAGAATTGATTTTGAAAGATTTGAATTTGAATCCAAACGTACTCTAAGT TTGTGTTTAAAATAGATGTGATTCTGGTATAGAAGCTAGTAGGGGAAACATTTATAGATGAAGTGATTGTGAGGGGATTA AAAATGGATTCAATCTATAAGTGGTCTCTTGGGGCTGTTCTATTGTATAATGTGAATTCCTAATGTTGCTCTTTTTATTT TTGTGCTTTAATGTTGGATCAGACCGTGCATGTTTTAAGACATCAGTGGGAGTATTCATGTGAGAAAGCTAAAAGAGAGC TGGGTTATAAGCCCAGAAGCCTCAGAGAAGGATTTGCTGAGGTACTGCTCTGGTTGAAGAATTTGGGATCAATAAGATAC TAGTGGAACATACCAGGCTGTAACATAGGGCATAAAAGTCTTGTAATTTCACTCAAAAAACTGTAATAGAACCACAATGA TAGTTACCTTCTACTAGCTTGTGTTGAACTGTTGATCGAATAAATGGATGCCCTGTTATAGGTGCATTATGATTCTACTG CTTAGAACCACAATGATGGTACCAATGTTATTTATACACGCTAAGATCTTGTTATTCTTGTAAACAATATGTGTAGAAAA AACCTAAGAAGACCTCTGAAAAAATCCTTGATAAGAGAAATGATCGATCTAGATGAGCTTCACAGGACAAGGATAGTTGT TATATCTCTTCTTTAACTCTCTCCTCCCAGGTATTCTCTTCAAAATTTGCCCAAACAAGCATAGTATTAGAGTTCAGC
CDS sequence (LotjaGi1g1v0353900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACAAGGTATTGGTCACCGGAGCAACCGGTTACCTCGGAGGAAGGCTCTGTCACGCGCTTCTCCGACAAGGTTACTC CGTCAGGATCCTCGCCAGACGCACCAGCGATCTCTCCGCCCTTCCACCGCCTTCCGAGATCTTCTACGGCGACATCACCG ACTTTCCCTCTCTCCTCGCCGCCGTCTCCGGTTGCTCCGTCGTCTTCCACCTCGCCGCGCTCGTCGAGCCCTGGCTCCCT GATCCCTCTATAATCTTCTCCGTCAACGTTGGAGGGTTGAAGAATGTGTTGGAGGCGGTGAAGCAGAGCAACACAGTGGA GAAACTCGTATACACGTCGTCGTTTTTTGCTCTTGGACCAACTGATGGAAGCATTGCCGATGAAAATCAAACCCATCACG AGAAATTTTTCTGCACTGAGTATGAGAAATCAAAGGTTGCTGCTGACAAGATTGCAATGCAAGCTGCGTCAGAGGGTATG CCTATAGTGTTGCTTTATCCTGGTGTAATCTATGGGCCTGGCAAGGTCACTGCAGGAAACGTTGTTGCAAGGATGCTTGT AGAACGATTTTGTGGTCGATTACCTGGTTACATTGGCAGTGGGAATGATAAATTTTCGTTCAGCCATGTGGATGATGTGG TGGAGGGTCACATTGCAGCAATGGAGAAAGGAGAGCTTGGGAATAGGTATCTGCTGACGGGTGAAAATGCGTCGTTCAAG GAAATTTTTGACATGGCTGCTGTGATAACTGATACTAGAAAACCAGTGATTAACATCCCTTTGTGGGTTATTGAAGTTTA TGGCTGGATATCTGTTTTGGTTTCTCGAATCACTGGCAAGTTACCCCTCATCAGTCCGCCGACCGTGCATGTTTTAAGAC ATCAGTGGGAGTATTCATGTGAGAAAGCTAAAAGAGAGCTGGGTTATAAGCCCAGAAGCCTCAGAGAAGGATTTGCTGAG GTACTGCTCTGGTTGAAGAATTTGGGATCAATAAGATACTAG
Protein sequence (LotjaGi1g1v0353900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNKVLVTGATGYLGGRLCHALLRQGYSVRILARRTSDLSALPPPSEIFYGDITDFPSLLAAVSGCSVVFHLAALVEPWLP DPSIIFSVNVGGLKNVLEAVKQSNTVEKLVYTSSFFALGPTDGSIADENQTHHEKFFCTEYEKSKVAADKIAMQAASEGM PIVLLYPGVIYGPGKVTAGNVVARMLVERFCGRLPGYIGSGNDKFSFSHVDDVVEGHIAAMEKGELGNRYLLTGENASFK EIFDMAAVITDTRKPVINIPLWVIEVYGWISVLVSRITGKLPLISPPTVHVLRHQWEYSCEKAKRELGYKPRSLREGFAE VLLWLKNLGSIRY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 1 | 329 | 329 | 2.42E-69 | ||
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| Gene3D | 1 | 332 | 332 | 2.7E-101 | – | |
| PANTHER | 3 | 333 | 331 | 3.3E-141 | – | |
| PANTHER | 3 | 333 | 331 | 3.3E-141 | – | |
| CDD | 4 | 325 | 322 | 2.68059E-138 | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| Pfam | 4 | 229 | 226 | 8.7E-32 | ||
| Phobius | 16 | 20 | 5 | - | – | |
| Phobius | 21 | 333 | 313 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Coenzyme binding | Interacting selectively and non-covalently with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed. |
Expression pattern of LotjaGi1g1v0353900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…