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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0360900 |
| Transcript ID | LotjaGi1g1v0360900.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Adenine phosphoribosyltransferase-like protein; TAIR: AT1G27450.1 adenine phosphoribosyl transferase 1; Swiss-Prot: sp|P31166|APT1_ARATH Adenine phosphoribosyltransferase 1, chloroplastic; TrEMBL-Plants: tr|A0A075EAV1|A0A075EAV1_ASTME Adenine phosphoribosyl transferase; Found in the gene: LotjaGi1g1v0360900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:83580747..83584598) extracted from Lotus japonicus Gifu genome v1.2.
GCCCTCTAGTACTTTATTTTAAGGGTAACGTCCCTTAAATATTTAATTTTTTCTTTGTTCCTACAATGATATGATACATG ACCCATAGCATAGATTAGGAAAGTGAAATTGAAAACATTAAGAGAAAAGAGAATGCAGTCAAGTAGGGTGCTCTTGTGCT CATCCACCAATTCATTGTCGGGGTCAGCCGTCACTCCCACACTTGCCTCTTTTCCCAGATTCCCAGCACCACTCTCAGCA AAGATCGCAAACTCAACATCATCATCATCATCATCCTCCTCGATTCGCTTCCAAAATTCTCCACCACTCCGCTCCACTGC TTCTTCTTCTTCTTCCTGTACAGTAACAGTAGTTCCCTCTTTCTCTCTGATCTAATTTTTCCATCTTCACTGTTTTTCTC TCTCGTAACGGTTCTTCCTCTTCCTGTGTTTGGTTCAGCAGCGAATATGGCTTCGCAAGACCCGCGCATAGCAACAATCT CCTCTGCGATCCGAGTCATTCCTGATTTTCCCAAGCCAGGTAGGTCAATAGTCAATACTCTTTTTCTGATTTCTGATTTG TTTTTGTTGAATGTTGTGATGTGGTTTGGTTATATGATTTTGATTGAATTGCATTCGTTGTTTGTGAATTGAATTGTGTT GTGCCTATCAGGTATCATGTTCCAGGATATAACCACTCTGCTTCTTGATCCCAAGGCTTTCAAGGATACCATTGACTTGT TTGTTGAGAGGTACAGAGATCAAAACATTTCTGTTGTCGCAGGTACTGTCCCCCATACCACACTCCCTGGCCTTATTTCA ATTCTATATGTAATTCCATGTTTAGGGTGTGTGTGGGTAAACACCTTAACTTCTTATTCATAAGCTAATTTGAACAACTT ATGAAAATAACCTCAAAACAACTTATAGGTACGGCATAAGGCTCTCACAAACACTTGCATTAAACTCAAATCAGCTCTTC CAAATGGGGCCTTAGTTGGTCTTTATCAACTTATGATCATCTTGTGAATGATGCCCAGATTCCGTTAAAATAACTGAGTT TCTCAGTTTCTGTTTGTTGTTGTTCTAAATCCTTTTCCATCAGGGCAAGGGGAGTTTTGAGTTTCCGTCGTCACTCACTC GTTAACAATGGAGAATAATCTAAACAAGGCTTAACTTAGTACACTATCATATGTTCAGCTTTTGATATTATGATAATCAA CACTCCTGGCTCTTTCTTTATAACAATTTCTAATCTACAATTTTTGATAAATGGAAGCATTGTTTTGTTTTTCCTATGGG CAGCACAAGTCGTTATTGTTTCCTTCTCTTGAAGGGTTTCAGATAAATTGTTTTTATGGTCAACAATTTCTAATCTGCTA CTATTATAAATGGCGGCATTGTTTCCTTGCCTATGGGAATGAGTTATTCCTGTGTCTTTCTCTTGATGGGTTTCGTGTAC CATGTTCATAATGCTTACTGGCATGATCTCGGGAATGACAAAATTTTGGGCACTTGTTTGAGGATTACATTGCGTAATTC ATTCATTTCTATGGTTTCCATACAAACTGGGATATTTTATGATTCCAACATCAGAAGATAGTAGAAGCAAAGTTAGTTTA CCAATCAGCACCCAAGTCATTAAAATTCTGGATGGTTCAGTTTTATATTGTTGTTTTTGGTATCTGCTCAATATAAGTTA CTAATTTGTGTCTCATTTACTCATAGCTTTATTTATGACATGATGCAGGCGTTGAAGCAAGAGGTTTTATATTTGGCCCT CCCATTGCATTAGCCATTGGTGCAAAATTTGTCCCCATGAGGAAACCCAAGAAATTGCCAGGTACATGTTTTGCGCCTTT CTTTTGAAATAAATGCATTTAACCTTATCAGGATTTCCTACTAGCAGTTAGCATATAATTTTTGGTTGGAGGCCTTTGAA TATCTGAATTGCATATGGTCTTCTAATTTTAATATTTGTGTACTTCACTATGCAAATTCAGTTGTTGAAAGTTCTTGAAT ATTATGTGACGGGGGAAGATCTTTGATTTGTCTGAATGGTTGTATTTTTATTATTTTTTCAGGACCGGTTATCTCAGAAG AGTATTCGTTGGAGTATGGAACTGATAAAATTGAGATGCACGTGGGGGCTGTACAAGCTGGAGAACGAGCCTTGATCATA GATGATCTTATTGCTACTGGAGGAACGTTAAGTGCTGCAATTAGGCTACTAGGTAACGTTGCAACATGATTGCTTAATTG GCTGTGCATTCTATGTATGAGCTTGTCCCAGCCTAGATACCCACTTCCTTGTTTTGTTTCATATGATGGGTCTATCTCCT TAATGAAATGAGGGTTTGTGTGTCTTACATTGTAAAAAGAATATGTAGTTTTCTTTATGGATTAAAAGCCTTTAGAAGTT TTTGAAATGAGCAAATATGGGCTTAACTGCTACTGAATCGGGAAAAAAAATCATCCTATCAAAGTTAGCAGAATCATGAT TTTCTTTCTTATGCATATGTGAATTATCATTATTATGGAGACAATTGGATAACCTATACCTGGGTAACAGAATCATGATT TTCTGTTTTACTTGGAAGTGTGTTTGTTTTATATAATGTTTGATGCTTAACTTGAGCATTTGAATACATTCTTAGTTGTT CTGTTTACACTTTCTTTATTGCAGAACGTGTTGAGGTGCAAGTTGTTGAGTGTGCTTGTGTGATTGAATTACCAGAGTTA AAGGTACCACCTTACACATATATATCTCCTTGGCTAATTGTTTTGCCTACTTCACTTCTTCTGCATATACTTTTCGTGAC TATTTATTTTTTGTTTCGTAAAAAATAAACACTGAAATCTGGAGGACAGTTATCTTTGTAAGTTACATTTTACATTTGAG AAACTCAAGCAATATGAGCAGAAATAAATAACGATACTAAAATTTGAATTGTATCTTCAAATTTTGTTTTCTAAAGAGAC ATTAATTTCAACATTTCTTGCGTAGACAGAAAGTAATTTGCACACTGAGCCAATAGGAATGACTTGGTTTGATATTTTCT AGTTTAAGTACCACCTACTATGATTTGTCAAGCCAACTAGGTTTTATTAGTTTAATGGCCAAACTGAATATGCACAATGT CTACCGAAGAATGCCTCATCAATCCCTTGCATTTCTTGATTCTGGGACATGAGTTCTTTGTAATTGCTATAATTTCCTTC ATGTGGCTTATTTCAGGGGCGGGAAAGGCTGGGCGACAAGGCGCTATTCGTCTTAGTTAATGGATCTTGATATTTACTCT GGTGATTGTCTTTTAGTTATTAACCATTTGAGATGGCTCTTGGGGGTTATACGCTTAGTTCTACTTAATTTTCCTTTTAA ACTTTCTATGTGCCGCTTTTGGTTTGAAACTCTTAATTTATAGTGAAGAGCCATTTGAGAGCTCAGGCTCGAGTTCCATG CAACATTACCCTATTTTTATATTGAGGAAATGATGGCTGTAATAAAGTTCTTGTTTGCCATTTGGTATCACAAGATCCTA AGTTTAGGATTATTATTATACTATGAGTTGTATTGGGAACGTGAATCCTACATGATGGATTTGGGTCCCCTGTGGTTTCA AAATATATCACCGGGACCATTTGATATTATTTAGTACTTGCAAGGCTTTTTCTCTATGCTCAACCGGTAATCAAATAATT CACTTGTGTATCATGAGCTTACATGTATCCTAATAATATAGTACATGGTTGAATTATTCATTTTAACCCCTTATTCTTTT CTTCTATTGCTACCTTTTTCAAGATGATCTCAGAGGAATTTCTCTTTTCCCCTGTTTGAGGAAAATTGATAAGAATTCAA AACAAATGACCT
CDS sequence (LotjaGi1g1v0360900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGTCAAGTAGGGTGCTCTTGTGCTCATCCACCAATTCATTGTCGGGGTCAGCCGTCACTCCCACACTTGCCTCTTT TCCCAGATTCCCAGCACCACTCTCAGCAAAGATCGCAAACTCAACATCATCATCATCATCATCCTCCTCGATTCGCTTCC AAAATTCTCCACCACTCCGCTCCACTGCTTCTTCTTCTTCTTCCTCGAATATGGCTTCGCAAGACCCGCGCATAGCAACA ATCTCCTCTGCGATCCGAGTCATTCCTGATTTTCCCAAGCCAGGTATCATGTTCCAGGATATAACCACTCTGCTTCTTGA TCCCAAGGCTTTCAAGGATACCATTGACTTGTTTGTTGAGAGGTACAGAGATCAAAACATTTCTGTTGTCGCAGGCGTTG AAGCAAGAGGTTTTATATTTGGCCCTCCCATTGCATTAGCCATTGGTGCAAAATTTGTCCCCATGAGGAAACCCAAGAAA TTGCCAGGACCGGTTATCTCAGAAGAGTATTCGTTGGAGTATGGAACTGATAAAATTGAGATGCACGTGGGGGCTGTACA AGCTGGAGAACGAGCCTTGATCATAGATGATCTTATTGCTACTGGAGGAACGTTAAGTGCTGCAATTAGGCTACTAGAAC GTGTTGAGGTGCAAGTTGTTGAGTGTGCTTGTGTGATTGAATTACCAGAGTTAAAGGGGCGGGAAAGGCTGGGCGACAAG GCGCTATTCGTCTTAGTTAATGGATCTTGA
Protein sequence (LotjaGi1g1v0360900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQSSRVLLCSSTNSLSGSAVTPTLASFPRFPAPLSAKIANSTSSSSSSSSIRFQNSPPLRSTASSSSSSNMASQDPRIAT ISSAIRVIPDFPKPGIMFQDITTLLLDPKAFKDTIDLFVERYRDQNISVVAGVEARGFIFGPPIALAIGAKFVPMRKPKK LPGPVISEEYSLEYGTDKIEMHVGAVQAGERALIIDDLIATGGTLSAAIRLLERVEVQVVECACVIELPELKGRERLGDK ALFVLVNGS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 25 | 25 | - | – | |
| Phobius | 6 | 17 | 12 | - | – | |
| Phobius | 18 | 25 | 8 | - | – | |
| Phobius | 26 | 249 | 224 | - | – | |
| MobiDBLite | 38 | 73 | 36 | - | – | |
| Gene3D | 62 | 247 | 186 | 1.8E-71 | ||
| PANTHER | 71 | 247 | 177 | 3.5E-101 | – | |
| PANTHER | 71 | 247 | 177 | 3.5E-101 | – | |
| SUPERFAMILY | 80 | 242 | 163 | 1.22E-50 | ||
| Hamap | 81 | 248 | 168 | 35.75 | ||
| TIGRFAM | 82 | 246 | 165 | 9.5E-64 | ||
| Pfam | 107 | 243 | 137 | 5.2E-20 | ||
| CDD | 115 | 245 | 131 | 9.83157E-27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Adenine phosphoribosyltransferase activity | Catalysis of the reaction: AMP + diphosphate = adenine + 5-phospho-alpha-D-ribose 1-diphosphate. | ||
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Biological process | Adenine salvage | Any process that generates adenine, 6-aminopurine, from derivatives of it without de novo synthesis. | ||
| Biological process | Nucleoside metabolic process | The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine). |
Expression pattern of LotjaGi1g1v0360900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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