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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0361700 |
| Transcript ID | LotjaGi1g1v0361700.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GPN-loop GTPase; TAIR: AT5G22370.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q58DD9|GPN2_PIG GPN-loop GTPase 2; TrEMBL-Plants: tr|A0A1J7IIZ2|A0A1J7IIZ2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0361700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:83639344..83642451) extracted from Lotus japonicus Gifu genome v1.2.
ATGGTGTTTGGGCAAGTAGTAATTGGTCCTCCTGGCTCTGGCAAAACAACTTATTGCAATGGCATGTCTCAGTTCCTTAA TCTTATTGGAAGGTAAGTCTCACTCTTTAGGGGGAGATAAGGTTAGAACATATTATTATGTTATTTTTTGGTTTTCTACT AATTTGGTTATTGCATTTGTCTTATCTATTTTAATTTTGAAATGCAGGAAGGTTGCTATTATCAATTTGGATCCCGCTAA TGATTCATTACCGTATCCTTCTCTCTATCTCTCTCAAACATTGTTTTACTTAACAATGTCTTTTTTTAGTTGTATAGTTA AATTGATATGGTTTCCCCTAATGAAAACTATAGCTATGAATGTGCTGCAAACATTGAAGATCTCGTGAAACTGAGTGATG TAATGGTCGAACATTCTCTTGGTCCTAATGGGGGTATGTCTATTCCTTTTGTTTGAAGTATTTATTCTTTGTGAAATCTC TACAAATTTAATCATGTAACTAGTTGCACTGTGTGATGGACTAGCTACAAGTGTAGTAGACATGAGTTGATAATTTTCTA GGTTCTGCTTTTGATAGCGTATACGAAAAATCTAACGAGTTACTTGGTGTGCAAATTAATGGTTCTCTCAAAAGGGGCCA TAAATTTGCTACTCAACCTTTTATAAGGCATTTGTTCCTTATGAAGCTCTTTTTGTGCTGTGCAAGCAGGTCTTGTGTAT TGTATGGATTATTTAGAGAAAAATATTGATTGGTTGGAAGCAAAACTGAAACCTCTTATAAAAGGTTAGTACACTATTGT GCCTTAATTTTGTAAATCTACAGCCTCAATAAGCAAGCTATAAGTTCCAACATTATCCTTAATTAGTCTACTAACTACTA TTATTCTTGTTCATTTAAAATACTTGTGGCCTAACATTATTATTAACATTTTAGATCACTACCTACTTTTTGATTTTCCT GGCCAAGTGGAACTCTTTTTTCTTCATTCAAATGCCAAGAATGTCATCATGAAGCTCATAAAGAAATTGAACCTAACGGT ATAGTTTTTTTTTTTACATCATCCTGATGTCAATTGTCAAACCATATCGTATTTTGCAAACTCATTATATGTTCATTTTA TGCAGTTAACTGCAGTGCATTTGGTTGATGCTCATCTTTGCAGTGACCCTGGGAAGTACATCAGTGCATTGCTTCTATCC TTATCCACAATGCTACATTTAGAACTTCCCCATGTAAATGTCTTGTCAAAAATTGATTTAATTGAGAGCTATGGAAAACT AGGTGCGGCAATTATTTTTTTAATGTTAGGGAGTTGAGTAACTATTTTCTTCTAAGCTGGTTTTAGATGAAAGATTTCTT TGCTGACTTTACTATTTGATGGTTGCAGCCTTTAACCTTGATTTCTATACAGACGTGCAAGACTTGTCATATTTGCAAAA CCATCTCGATCAGGATCCTCGCTCTGCCAAGTACAGGTGATTTGTTGTGTTTCTTTTCCTGGTAACCATACTTCTGATTC TTATGATTAAAATTTAAAATAGTACTTTGACGTGTTTTACTTTTGTTTGTTGAAACTTTTGAACTGTTTCTTGCGCAATT TTATGACATATTGTATAGTTGCTAAATTGTATTTTCAATGGTAGATTCTATATACTCCTTAGACTAGAAGGAAAAAGGAC ACAAATTTTAATTTTTAGAACTTGGGTCAAACAGCTTCTGAGCTTCGTACTTGATGATAGATTCTAATATAAAAACACTG AATAGATATTACTATTAGATGATGATGTTCCTTAAATTTGGTGAAGTTAAGATTTTATAATCTCTCAATGTGTGGTGCTC CACTGGCAAAAACAGCTTATGATGAAAAATGTGCTACGATTGGGTCATTCATTAATTTTCCTCATTTGCAATGATTATAA GGTTCTATGGTCCAAGTTGTCCTGATGTGAAACATGCGTATATCCTCAGGGGCGTAGCCAGAAAAAAATGGGTAAGGGGG ATGAAAATTTAACACATTAGACAAAATTAACACTAGTTGAAAGAAGCGCTAAAAAAATTTAAGGGGGATGAAAACAACAT TTATATATTATTTTGTTAAGGAAATTTTTTCTCTTTGGGCGCGACCGCCCCTTTAAAGCTCTACCTGCTTCCATCCCTGT ACGTTGCTTGATGTTTGGTGTCTAAATTTCTTTTTTTTTTTTCTGACTGTCAATTTTGAATAGTAGCCTGCAAATCAAAA TGAAAAGGTTGAAATGGTGGTTAAGGTTGGTGCAAATGTGTTAGATCGAAATTATGTCAGTATACAAGACGTTCACTAAT TACTAGTTCTTTCAGACAGATTTGATAGGAGTAGACTGTCATTTTTGGTATAACTTTTAAAATATAAATGTTTCCATAAG GACCTCATGCAAAACATATGATAAGTTGTCAGGACATGACATTGAGTGTTTTTATTCTCCAACCCCCACTTAAAGGTTCT GATTCAATATGTTATTATGTTCTCTATTTCATCCTTAAGACAGACATTTGTTTTTTACTGAAAGTTGTTAAAAGGATTAT ATTTATTATATTTGCAGAAAGCTAACCAAGGAATTGTGTGAAGTTATTGAAAACTTCGGCCAAGTGACTTTTACAACCTT AGATATTCAGGTACACCAAATCTGCATGGATTTTTCATCTGTTCCTGTCAAATGTTCAGAATACTAAGTTAGAATTTCCT TTTTTGCAGGATAGGGAGAGTGTAGGGAATTTAGTGAAGCAGATAGATCAAAGCAATGGGTACATATTTGCTGGCATGGA AGCAAGTGCTGTTGAATTTAGCAAGATTGCAATTCGTCCTGTTGATTGGGATTATTATAGATATCCTTGTTATATCATCG TTTGATTATTCTGTCTCATTTTTCTTTTAACTTGGATAAATAACTAAAGCAAAAATCATTACTTGCATCATTCCATAACT AAACTACCATTGTTCTGCATTTTCAATCTGTATAAGGTAAGCTTTGCATGCTTTCACTATTTTTAACTGCTGATTTTTTG ATCCTCTAGTAACACCAAAATGATGATGCTACGGATCCATAAGCACAAAAGTGTGCCTTTCCTTCTAG
CDS sequence (LotjaGi1g1v0361700.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGTTTGGGCAAGTAGTAATTGGTCCTCCTGGCTCTGGCAAAACAACTTATTGCAATGGCATGTCTCAGTTCCTTAA TCTTATTGGAAGGAAGGTTGCTATTATCAATTTGGATCCCGCTAATGATTCATTACCCTATGAATGTGCTGCAAACATTG AAGATCTCGTGAAACTGAGTGATGTAATGGTCGAACATTCTCTTGGTCCTAATGGGGGTCTTGTGTATTGTATGGATTAT TTAGAGAAAAATATTGATTGGTTGGAAGCAAAACTGAAACCTCTTATAAAAGATCACTACCTACTTTTTGATTTTCCTGG CCAAGTGGAACTCTTTTTTCTTCATTCAAATGCCAAGAATGTCATCATGAAGCTCATAAAGAAATTGAACCTAACGTTAA CTGCAGTGCATTTGGTTGATGCTCATCTTTGCAGTGACCCTGGGAAGTACATCAGTGCATTGCTTCTATCCTTATCCACA ATGCTACATTTAGAACTTCCCCATGTAAATGTCTTGTCAAAAATTGATTTAATTGAGAGCTATGGAAAACTAGCCTTTAA CCTTGATTTCTATACAGACGTGCAAGACTTGTCATATTTGCAAAACCATCTCGATCAGGATCCTCGCTCTGCCAAGTACA GAAAGCTAACCAAGGAATTGTGTGAAGTTATTGAAAACTTCGGCCAAGTGACTTTTACAACCTTAGATATTCAGGATAGG GAGAGTGTAGGGAATTTAGTGAAGCAGATAGATCAAAGCAATGGGTACATATTTGCTGGCATGGAAGCAAGTGCTGTTGA ATTTAGCAAGATTGCAATTCGTCCTGTTGATTGGGATTATTATAGATATCCTTGTTATATCATCTAA
Protein sequence (LotjaGi1g1v0361700.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVFGQVVIGPPGSGKTTYCNGMSQFLNLIGRKVAIINLDPANDSLPYECAANIEDLVKLSDVMVEHSLGPNGGLVYCMDY LEKNIDWLEAKLKPLIKDHYLLFDFPGQVELFFLHSNAKNVIMKLIKKLNLTLTAVHLVDAHLCSDPGKYISALLLSLST MLHLELPHVNVLSKIDLIESYGKLAFNLDFYTDVQDLSYLQNHLDQDPRSAKYRKLTKELCEVIENFGQVTFTTLDIQDR ESVGNLVKQIDQSNGYIFAGMEASAVEFSKIAIRPVDWDYYRYPCYII
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 269 | 269 | 3.2E-131 | ||
| PANTHER | 1 | 269 | 269 | 3.2E-131 | ||
| CDD | 3 | 252 | 250 | 3.59519E-119 | – | |
| Gene3D | 5 | 265 | 261 | 1.4E-91 | – | |
| SUPERFAMILY | 6 | 254 | 249 | 5.48E-44 | ||
| Pfam | 7 | 255 | 249 | 6.0E-81 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0361700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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