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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR004130
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 12 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.516s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v1732320.1
n.a. PREDICTED: GPN-loop GTPase 2-like [Glycine max] gi|356509777|ref|XP_003523622.1| chr1 20333159 20343656 -
3 domain predictions
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Lj1g3v1732320.4
n.a. PREDICTED: GPN-loop GTPase 2-like [Glycine max] gi|356509777|ref|XP_003523622.1| chr1 20333159 20345291 -
3 domain predictions
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Lj4g3v2263890.1
n.a. GPN-loop GTPase [Medicago truncatula] gi|357443887|ref|XP_003592221.1| chr4 31368790 31373027 -
3 domain predictions
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Lj6g3v1055590.1
n.a. PREDICTED: GPN-loop GTPase 3-like [Glycine max] gi|356526825|ref|XP_003532017.1| chr6 12086209 12094359 +
3 domain predictions
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LotjaGi1g1v0361700.1
n.a. GPN-loop GTPase; TAIR: AT5G22370.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q58DD9|GPN2_PIG GPN-loop GTPase 2; TrEMBL-Plants: tr|A0A1J7IIZ2|A0A1J7IIZ2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0361700 LjG1.1_chr1 83637464 83643768 -
3 domain predictions
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LotjaGi1g1v0361700.2
n.a. GPN-loop GTPase; TAIR: AT5G22370.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q58DD9|GPN2_PIG GPN-loop GTPase 2; TrEMBL-Plants: tr|A0A1J7IIZ2|A0A1J7IIZ2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0361700 LjG1.1_chr1 83638009 83643977 -
3 domain predictions
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LotjaGi1g1v0361700.3
n.a. GPN-loop GTPase; TAIR: AT5G22370.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q58DD9|GPN2_PIG GPN-loop GTPase 2; TrEMBL-Plants: tr|A0A1J7IIZ2|A0A1J7IIZ2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0361700 LjG1.1_chr1 83639344 83642451 -
3 domain predictions
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LotjaGi1g1v0361700.4
n.a. GPN-loop GTPase; TAIR: AT5G22370.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q58DD9|GPN2_PIG GPN-loop GTPase 2; TrEMBL-Plants: tr|A0A1J7IIZ2|A0A1J7IIZ2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0361700 LjG1.1_chr1 83639344 83643662 -
3 domain predictions
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LotjaGi1g1v0361700.5
n.a. GPN-loop GTPase; TAIR: AT5G22370.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q58DD9|GPN2_PIG GPN-loop GTPase 2; TrEMBL-Plants: tr|A0A1J7IIZ2|A0A1J7IIZ2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0361700 LjG1.1_chr1 83639497 83642451 -
3 domain predictions
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LotjaGi4g1v0332800.1
n.a. GPN-loop GTPase 1 like; TAIR: AT4G21800.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q54C25|GPN1_DICDI GPN-loop GTPase 1; TrEMBL-Plants: tr|G7IEN9|G7IEN9_MEDTR p-loop nucleoside triphosphate hydrolase superfamily protein; Found in the gene: LotjaGi4g1v0332800 LjG1.1_chr4 71186602 71191223 +
3 domain predictions
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LotjaGi6g1v0196600.1
n.a. GPN-loop GTPase-like protein; TAIR: AT4G12790.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q6ZM63|GPN3_DANRE GPN-loop GTPase 3; TrEMBL-Plants: tr|I3S336|I3S336_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0196600 LjG1.1_chr6 49355958 49361697 -
3 domain predictions
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LotjaGi6g1v0196600.2
n.a. GPN-loop GTPase-like protein; TAIR: AT4G12790.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q4V7Z0|GPN3_XENLA GPN-loop GTPase 3; TrEMBL-Plants: tr|A0A199VI62|A0A199VI62_ANACO GPN-loop GTPase 3; Found in the gene: LotjaGi6g1v0196600 LjG1.1_chr6 49356947 49361142 -
3 domain predictions
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