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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0364600 |
| Transcript ID | LotjaGi1g1v0364600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | carboxyl-terminal peptidase (DUF239); TAIR: AT5G25950.1 AslB, putative (DUF239); TrEMBL-Plants: tr|I3SZ69|I3SZ69_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0364600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:84162922..84167398) extracted from Lotus japonicus Gifu genome v1.2.
TATAAAGCTTAATGTTATTTTTCCTTTTGCATGACTCTCAGTTTAGTGAGTGAGAGTTGAAGGGTTCAGAGAATGAGAAT TTTTAAGGTTGTATTTGTGTTGCTTTGCGCGTTGTTTTCCTCTTGTAACCAATTAAAATTCAAAGTTGAAGGAAGAGCAT CATCATCTTTAGAAAGAGAAATTGAAGCCAAACTGAAGCTCCTTAACAAACCTGCGGTAAAAACAATTAAGGTATTCAAC TCCGCACCCCGACCTTTTTATAATTGTTATGATTTCAGATTTTGCATTTTTCTCACTCTTTTCAAAGTCCTCAAATAATT TGTTTCTTTTAAAAAAACAAATATTGAGTAAATATTTCAAGATTAAATGTTTTAAATATTTTAAAAAAATATTGAAGATA ACTTATCATTTATTTCGTTTAAAAAAATAAAAAATAAAATTCATTTTTCTGAAAGTCAAGCCTATGGAGTGAGAAATTAT ATTTTTATAATTATAAAAAATATTTTATCGAACAAAAATTAAATCCTCATATAATTGAGTAAACAATTCAATAGTAAAAT TTTCAGTTGTAATTTTTTTTATAATGTTTTAATAAATTTTGCAGTATTTTTGGAAAATACTATCTTTTAATAATCTCTTA GAATGTGTTTGTGTTAAAGTTTACATAAAATAAAATTGGGTTTTTTAAATCACACATAGGTGTGATTCAAATCAATCTTA TCCGGACTAATAAAATTTATGAAGTGAGTAAAGAGCTTCATAACTTTTATTTATATACAGAAATGATCATATATTGGTGC ACAAGAATGAGGTTAAATCATACTTGTGAATGACTTAGAAAACTCCAAAGTAAAAGTATTTAATTTTAAGGAGCCTATAT TATCTTTGTCACGGTCTTTTTTTTGTTGAAAAAAATAGTTTTTCCGTTCTCTTAACATTGTAATATGCACCAAAAGATAT TCAATGGTTTCCAATTTAAATCTAAATTATTAATGTGAAATATTTAACCAAATGGTATTTAATATATTGAAGATATAAAT ATGATTCACTTTTTGATAAAAAAAAATGATTCAACTTTTAATAATAAAAATGTTATCGATAAATTGAATTCAAATTGTTA TACTTGAATATAAACCTTACTTTATTTTTCTTTTTTCAGAGTGAAGATGGAGATATTATTGACTGCATCAACATTTACAA ACAACATGCTTTCAACCATCCTGCATTGAAGTACCACACCATTCAGGTGCGTAACTATGATTGTAAAAAGTGTGGTGTCC ATGTGGTAACAATTTTTAGTAAAAGGTGATTCATTTCTATGCTTATATTCAATAAGAGTTGTAAATTATGGGCACACAAA AAAAACTTGTTAAAAAATTATAATATTTTGGAAATTCCAAACATAGCCATTCTAGCTATATATAAATAAATTTTACATAG TCAATTAATTAAATTCTTCAAATCATAAAATATATCTTCATTTTATTTTAAATAATAATTATTTTCTACCTACATGACAC ACTGTGATTAGTTAATTATCAGTGTAAAACTGTTTTACACTTATGATACATGTCAATTAAACTCTTCTAATAAAACTTTA GTTTTGCCTTAAAATTACAAATATGTTAAAAGGCATAAATTACTCAATTCATTAAATTTGCTTTCATTTCATGCTGGAAA AGTTGCAACACATGCATTTATAATTAACTTCATGTCACAAATGTCAACATTGTGTGATAGTGTCTTAAATGTTAGACTTG TTTTTCTTCTTACAAGAGGAATAAAAATGTTAGACTTGTTTGTGTCCTTAAAAGCTCCATATGTTTTTAGAATAAAATAA TAAAGTTTATAGCTAAGTTCATCTGTAACTTTAAATTGGTTTCTTGGTCAGCATGGGTCACTAAATGATTTAGTGTACTT TTAGGACATTCGGGTTAAGGGGAGTTAATCATGGGTGCTGTCATTGAAATTATGAGATTTCAACCATAATATTAGGTTTA GCTTTCGAGCTTAACAAATTACATCTAAAACATGTTTTTTAAATTTAAATCGTTAGATTTTTATCAAACTATCGAGAAGC ATTGACTGTAGTGACTAGACAAGAAATTGGTTGTATTGAATTTATTACCTTTTAGTATGCACACGTAATTTTCAAATAAT TATTCAACTTTTGACCAAAGGATCATAGTGCTGGTGGAACCTTAGAATTCATAAAAAAATGTCACTGTTATTATTTAATT TCATCTCAATATTCATCTTAAACTGACAGATTGTGCATCATTGACTAATGAACCATGCAGAAAGTCCCTGATTTCCTTCT AGATTCCCATAACTCTAGCACATTTCAAGTGTTCCAAACATGGCAGAAAAGTGGAAGCTGTCCAGAAGGAACTGTTCCCA TTCGCCGAATTCGAAAAGAGGACTTACTAAGAGCAACTTCTTTGGAACTCTTTGGTCGAAAACCCCCAATACATTTCATA AATTCAACAAACACCACAAACTCTAATTCCCATGAATTCAATGGCTCCAACACATACATTCCAGAAAATCGCTCGGTACA TACATACTTTATAATTATACACACGAGATATATTTTGATTTAATGTAGCGAACTAATTGTGATATGGCATGCAGCAAACA TATCTTTTTACAGTGGGATACAATTACATAGGTGCAGAAGCAGATATTAACGTTTGGAATCCAAGTGTTGATCTACCAAA TGATTACACCACTGCTCAAATTTGGCTTTTGGCTAACAATGGTCCTCAGTTTTTGCAAAGTGTTGAAGCAGGCTGGGTGG TTAGTTTACACTCACTACTTACAATTCCAAATCAACCATACCTTAATTTCAACAACAACAAAAGTTAACAACACCTTTTA TATATTCCTACCAATATATGATTTTGCATATATAATGTGTATGACTATTAATTTGTTTTAAAAAGTCACATGGTTTTTTT AAGTGACCACATGACTATTAATTTATTTTAATCTAGATCGTTCATGATTAGATCTAATTGTCGTAATTTATTCTCATGAG ATACATCATATGTGTGTGTGTGTGTGTGTGTGTGGTGTAACATAGCAAGTGAGGAAAGTGTATATTATGAGAGATGAAAG CAGTAAATCTTAACCATTTGATTGAACTATAAATGGTCAAGGTTAAAACATAATGTCATGTGATTTCTAACGTACGTATT AGGTGAGTGGACTTGCAATCATTAGAGATGAATCTTAATCATTAGATTTCACTATGAATAGTTTTATAAAGTAATGCGAC CACTACCCTTTTTTATATCAACCACTCATGTATGGTTGAACAATTACAATTTAGTATTCCTATCTTTTACGATAAACACT TTAATTATCACCTGATGTGCCTTAAGGACACACACTAAATTAATGTGAAGTATTACAAATGATCACGCACTTAACAAATT CTCTCTGTATATTACGGTCTAGGTGAATCCAAAGTTGTATGGTGATAAAGCCACTCGATTGTTTGCTTATTGGACTGTAA GTACTTTATTAATTGAAGCATTATTCATTTTTCTTAATGGTCTTTCTTCTTAAATAATATTATTGCTTAATTTTTAACCT ACAAATTTTGGAGGATGAAATCAAACTAACATTGATTTTTGGTTTGATAATTTGTGTTGTGCAGACGGATTCATACAAGT CAACAGGTTGCTTTGATGTTACTTGCCCTGGATTTGTGCAAACAGGGCAAGTAAGTCTTGGTGCTGCCTTAGCCCATATT TCATCCAAACGCGGTCAACAATATGAGATCAACATTGGAATGTTTTGGGTAATGCTCATGTATTTTTTTTATACTTATTC ATATGCTATAAATTGTTTTAAACATGTTTTGTACTTCTCTAAAAATTAATTAATTTATCACGATTATATTTTAACATCAA CTATTATATTAACTATTATTTATTGGTGGCCAAATTCAGGATGACTCAGGAAATTGGTGGCTTAGAGTGGGCCACAATAC GCCTGTGGGTTATTGGCCTGCGAAATTATTCGGTGCTGCTGGGTTGAGCCATAGTGCAATAGCGGTTGAGTGGGGTGGAC AAGTGTACAGTCCGATGGTAAAGAAAAGACCACACACAAGAACCGCTATGGGGAGCGGAGAGAGTGCAGAAAATCGTTGG GGGAGCGCATGCTTCATGCGCAATTTGAGAATTAAGGATTACTCACAACAACTTAAGTACCCTAGTCATGTAAACACAAA CGCTCCAGAACCCTATTGCTACAATATCTTAAATGAGGCTAAATATGGACAAGAACCTATCTTGTATTTTGGAGGCCCGG GACAAGCGCCTCCCTATTGTCCTTGAATTTCCTTAAAATAAAATTATATAAAAATATTTTTTATTGATTAAAAATAAAAG GTAAATGCTCTTTGTAATGTTTTTAGTAAAGATATTAATATTAATGTGAATGAATATAACTATCCATTAAACACCGG
CDS sequence (LotjaGi1g1v0364600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGAATTTTTAAGGTTGTATTTGTGTTGCTTTGCGCGTTGTTTTCCTCTTGTAACCAATTAAAATTCAAAGTTGAAGG AAGAGCATCATCATCTTTAGAAAGAGAAATTGAAGCCAAACTGAAGCTCCTTAACAAACCTGCGGTAAAAACAATTAAGA GTGAAGATGGAGATATTATTGACTGCATCAACATTTACAAACAACATGCTTTCAACCATCCTGCATTGAAGTACCACACC ATTCAGAAAGTCCCTGATTTCCTTCTAGATTCCCATAACTCTAGCACATTTCAAGTGTTCCAAACATGGCAGAAAAGTGG AAGCTGTCCAGAAGGAACTGTTCCCATTCGCCGAATTCGAAAAGAGGACTTACTAAGAGCAACTTCTTTGGAACTCTTTG GTCGAAAACCCCCAATACATTTCATAAATTCAACAAACACCACAAACTCTAATTCCCATGAATTCAATGGCTCCAACACA TACATTCCAGAAAATCGCTCGCAAACATATCTTTTTACAGTGGGATACAATTACATAGGTGCAGAAGCAGATATTAACGT TTGGAATCCAAGTGTTGATCTACCAAATGATTACACCACTGCTCAAATTTGGCTTTTGGCTAACAATGGTCCTCAGTTTT TGCAAAGTGTTGAAGCAGGCTGGGTGGTGAATCCAAAGTTGTATGGTGATAAAGCCACTCGATTGTTTGCTTATTGGACT ACGGATTCATACAAGTCAACAGGTTGCTTTGATGTTACTTGCCCTGGATTTGTGCAAACAGGGCAAGTAAGTCTTGGTGC TGCCTTAGCCCATATTTCATCCAAACGCGGTCAACAATATGAGATCAACATTGGAATGTTTTGGGATGACTCAGGAAATT GGTGGCTTAGAGTGGGCCACAATACGCCTGTGGGTTATTGGCCTGCGAAATTATTCGGTGCTGCTGGGTTGAGCCATAGT GCAATAGCGGTTGAGTGGGGTGGACAAGTGTACAGTCCGATGGTAAAGAAAAGACCACACACAAGAACCGCTATGGGGAG CGGAGAGAGTGCAGAAAATCGTTGGGGGAGCGCATGCTTCATGCGCAATTTGAGAATTAAGGATTACTCACAACAACTTA AGTACCCTAGTCATGTAAACACAAACGCTCCAGAACCCTATTGCTACAATATCTTAAATGAGGCTAAATATGGACAAGAA CCTATCTTGTATTTTGGAGGCCCGGGACAAGCGCCTCCCTATTGTCCTTGA
Protein sequence (LotjaGi1g1v0364600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRIFKVVFVLLCALFSSCNQLKFKVEGRASSSLEREIEAKLKLLNKPAVKTIKSEDGDIIDCINIYKQHAFNHPALKYHT IQKVPDFLLDSHNSSTFQVFQTWQKSGSCPEGTVPIRRIRKEDLLRATSLELFGRKPPIHFINSTNTTNSNSHEFNGSNT YIPENRSQTYLFTVGYNYIGAEADINVWNPSVDLPNDYTTAQIWLLANNGPQFLQSVEAGWVVNPKLYGDKATRLFAYWT TDSYKSTGCFDVTCPGFVQTGQVSLGAALAHISSKRGQQYEINIGMFWDDSGNWWLRVGHNTPVGYWPAKLFGAAGLSHS AIAVEWGGQVYSPMVKKRPHTRTAMGSGESAENRWGSACFMRNLRIKDYSQQLKYPSHVNTNAPEPYCYNILNEAKYGQE PILYFGGPGQAPPYCP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | - | – | |
| ProSiteProfiles | 1 | 18 | 18 | 6.0 | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 24 | 24 | - | – | |
| SignalP_EUK | 1 | 20 | 20 | - | – | |
| PANTHER | 5 | 416 | 412 | 3.3E-136 | – | |
| PANTHER | 5 | 416 | 412 | 3.3E-136 | – | |
| Phobius | 6 | 15 | 10 | - | – | |
| Phobius | 16 | 20 | 5 | - | – | |
| Phobius | 21 | 416 | 396 | - | – | |
| Pfam | 51 | 155 | 105 | 4.5E-34 | ||
| Pfam | 185 | 408 | 224 | 3.7E-66 | ||
| Gene3D | 198 | 260 | 63 | 1.0E-6 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0364600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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