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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0368300 |
| Transcript ID | LotjaGi1g1v0368300.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | magnesium transporter, putative (DUF803); TAIR: AT5G11960.1 magnesium transporter, putative (DUF803); Swiss-Prot: sp|Q8RWH8|NIPA9_ARATH Probable magnesium transporter NIPA9; TrEMBL-Plants: tr|C6TB29|C6TB29_SOYBN Probable magnesium transporter; Found in the gene: LotjaGi1g1v0368300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:84646058..84650161) extracted from Lotus japonicus Gifu genome v1.2.
ATGTGGGAATCAATTGTTTTGACGGTTGTTGCGACTGCCGGAAACAACATCGGCAAGATCCTTCAGAAGAAAGGCACAGT CATTCTTCCCCCTTTCTCTTTCAAGTTCAAGGCATGTTTCTCATCATTTTCAATTTTCCCCTTTCTCTTTTCCGCTTTTT TCTTTCTTTCTAATGACCCTTTTATGCCTATGATCTGATTCCACCTTCAAAATCTCTCCTTTTAATCATTTCCTATGCTG TCAATTTGCCTTATGGTTGGTGAAATTGGGTTCATATGTATGAGGGTGGGATTTTGGGTTGTGAAAAATTGGGTAAATTA AGTGGGCAGGATGTGACTGTTTGATTAAGTATTAATATTGCTCTTTTGGATTATTTTTCCATCTTGTTTGCAGGTATTAA GGTCATATGCTATGAACAAAACATGGTTGACAGGTTTTGTAATGGATATATTTGGTGCATTATTGATGTTAAGGGCATTA GCTCTGGCTCCTGTAAGTGCTCTGGCCTTGCCTAAACAATAGTTAGAATTTTAAGTGACATGTCTCTAGTCTCTACCATT AGCATGTCTTTTCCCTATATTATTGAGTATTTACATTGGTAATGTACTTGTTTTTCTCAAATAGGTATCTGTCATCCAAC CAGTTTCTGGTTGTGGACTGGCAATTCTTTCAATCTTCTCTCACTTTTATCTCAAGGAAGTCATGAATGCTGTTGATTGG GTGGGCATAACTTTGGCAGGTTTTGGCACAATAGGTAATGTAAGTTTTAGATTTACATAATATTTGGTTGGAGGGTAATG GAGGGTTTTTTTTTTTTAATTAGCTTGTTTGGTTCAATTTTTAGGAGAGGAGGGGAGGGTTTGGAGGGGACCAAAACCCC TCCTAACTCAATTTTGTGTCCCCTCCAAAAGTGGGCCCCAATGGGAGGGGAAACATTTTATTGGATAAAAATGTCCTTGA GTCCTTCCTACTCATGCTTATTCCTCCCAATTTCCTTCACTTACATTGATGCTGCAATGTGCTATCTCTCTGTCATTATT GTTTTCTGCGTTCATTCCTTTTTTTTTTTGAACAATCAACTCAGATTTATGGGGAACAATAATCTAGGTGTTCAAAACGT AGAATATCAGTTAAAATATTAAATGGCATGTCCTCAATATAGTATTCAGAAATGAAGCAAAAATAAGATTATTGCAGAAC AATCCTGGAAACCGCAAAGAAACACGCTGTAGTTCAACTTTCAGGTTTCCCTGCGTGATGGATATGCTTTGTGGTACAAA TTCCCTTTGCTCTGTAAACCCCCCTTGCAAGTGTAAAAGGTGTAAAATTAACTTAATTATCAAAATCCTCCCCTCCCTTT GTGAACTAAATAAAAAATAAGAGTTATTTCCCCTCCCCTCTCTTGAACCAAACACACCCTTACAAAGAAAAGTGCATTAA GTTTAACTAAGTAACTAGCAATGGGAGTAACAAAGTTTCTAGGTTTCTATGTGAAAAGTGCTAACAATATATTCTTTGAC ACGGTCTTTTCAACAAAATGATATTATCGAGTGAATTTCATATATAAAAAGAGTGTAGATCCCGGATTTTTAATGGGCCT CACATAAAATTTATCCAATAATGTAAAATTTATTTGAAAGAATGTATTAGTGGCTTACTGGCATGTCTATTTTTATATCT TCAGAATTGAAATATGAATAAAGCGACTGTAGGTGAAACAGTGTACCATTTCATTTTTCTTTGTGCTTTGTGTCTATGCA ATGGATTGAGATTTATTGGAGTTTCCCTCATATTATTTGACTGCTAATAAATTTAAATTTGCAGTCAATTACTGGATTCA GCTCACCAAATATGTCATTATATTGATATATGATTTTACATTAATGTGTCTCAATTTGTTATCTGTTCTTTGTTCTTTTA TATTCAGGAGTTGGTGCTGGAGGCGAGGAGCAAGAGGCTGCTGCTCTATCTATTTTTCACATACCATGGCTGGCATTTGC TGTTTTCATCTTGTTTGTAGGTAACTCTATCTTATGCATCAATTTACTTTTATAGTGTGTTTGGAATGCTCTGGCCTATT AATCGCCAACTTTATGTAAAGCCTAGAACATCATTGTGGTCTCTTAGAATGCATTAAATGTGTTATGAAGCATTATGTTT TCTTTTTCATTAACCTGGTGGCCTAATTATGAAATTGTTGGTTTTGACACACTATTTTATTGACAGGCTTCAACATTCCC TTAAATATTGCTATCTTCCCGACATAGTTACTATTATAATTGTTAGAGTCACTTGTGCAGATCTTGCTTAATGGATGGCT TCGTATACGCAAACGTCAGCGAAAAGAACAAGAGATGGTAATTCGTGTCTTAATACTTACATGTTTATTTTTATGTGGAT ATGCCAATATAATGAGATACATTTGTCCTTTATTCTTCTTTCATTTCTTGACCTTTTTAAGTGATGCAGATGGAATATGA TGTTGTTGAGGAAATAATTTACGGCTTGGAATCAGGGATTTTGTTTGGGTACTCTTACTTCTCTACTAATTTTATGTATT GTGTTCTTGTATGGACACATTTTACTTCTTTCATTTACCTCAACTCCTTAATATCAGGATGAAGATAACGACAATTAAGT ATTTTTTTCATTTATGATATTTTTTGCATGTGTGAATTTTTTTGCATGTGTGAATTTTTTTAGTGAAGGTTTTTGGAGAG AATAAAGCAGCTAGTAGAATAACATGTTATGTAGAGAAGAAATAAAAACAAACAGAGAGCTAGAGGCTAAAAGTTGTAAA AAAAAAAAGCTATATCCTTTGTCTCTGCAAGAACTGGAAGTTCCTTTTAAACAATTATCAGCACAGTCCCACAGAGGGGT AAAATCTAAGGTTAAACAGATGCCTAAATGTGATCATTCCTCTCCAACTTCTAGTGTTTAGTATCATCATCTGAAAAAAA CTGGCAAATTTGTATTAACTGCAATATTTTCATTAGTTAATTCTAAACTTTAATTTAATTAGATTTGTCAGTTTCTATTT CACTACTTTGCCACTTTCTTCTGACAACGATCTAAACTTGAAGATCTTATTTACACACAAACACACACTCCTTGCTCTTA ATTGAGTTAATATGTAAATGCAGGATGGCATCTGTTATATCAAAGATGGGATTTCTATTCCTTGAACAAGGGTTCCCCAA GCTGCTGGTTCCTTTGTGCCTCATCATCAGTGTGTGCTCAAGTGGTACAGGTTTTTACTACCAGGTATTCTGAATACCAT AACTTGCTACTTTTGTGTGAACTTCTACACCATTTAAACCTAGGGGGCAGTTAAGCCTATGGGTGGTGGGGGAAGGTGTG ATTTCCATCAAATATATTCGTCTTAGTTCTTCACTGCCAATTTCAGAGATGCTAACATCTTGCAATCTTCAACATACAGA CACGCGGTCTGAAGCATGGGAGGGCTATCGTGGTTTCTACATGTGCAGCCGTGGCATCAATTTTGACTGGTGTACTTGCC GGGATGCTTGCTTTGGGAGAGCGACTCCCTTCAGCCCCGAAAGCTCGATTGGTACTTCTTCTTGGATGGTAATATAATAT TTTATAATATTATTTAGTAGTTAGTACATTTGCATCCCTTGCTTTCCTTGATTCCCAACAAAAGCAATGCAGAATTAAGC ATTTACTGTTTCTCTTCTATTCTTTGGTACAAGTGTTTATCTGTTTTGGTCAAAGGACTTGAGCAAGAGAATATATAATC TAAGTCCCAAGATATATATCAATTGTATTGTGGTAGAATCCAATCTAGTAATTCTTGTTTCTTAAAACAATATGGGAATC GTCACATTCTTATATGAAAGTTAATCAGAAACATTTTGCTGCAGGTTACTCATTATTTTAGGCGTGATTTTACTTGTTGG TTCAACAAGAGTAGTGAGATTCCTCCGATTAAATTCACAGCGCTTTAAAAGAACCAGTGTTGATAAGAATCATGGCCCTA GAAGATCTGCGGCATCCCGTATCAGGGAACCAAGTCCAACTGCTGTTATTCAAGCAGCGACCTTAAATCATCTACTGGCA TCATCTTCCAAAGAAAAAGCTTGA
CDS sequence (LotjaGi1g1v0368300.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGGAATATGATGTTGTTGAGGAAATAATTTACGGCTTGGAATCAGGGATTTTGTTTGGGATGGCATCTGTTATATC AAAGATGGGATTTCTATTCCTTGAACAAGGGTTCCCCAAGCTGCTGGTTCCTTTGTGCCTCATCATCAGTGTGTGCTCAA GTGGTACAGGTTTTTACTACCAGACACGCGGTCTGAAGCATGGGAGGGCTATCGTGGTTTCTACATGTGCAGCCGTGGCA TCAATTTTGACTGGTGTACTTGCCGGGATGCTTGCTTTGGGAGAGCGACTCCCTTCAGCCCCGAAAGCTCGATTGGTACT TCTTCTTGGATGGTTACTCATTATTTTAGGCGTGATTTTACTTGTTGGTTCAACAAGAGTAGTGAGATTCCTCCGATTAA ATTCACAGCGCTTTAAAAGAACCAGTGTTGATAAGAATCATGGCCCTAGAAGATCTGCGGCATCCCGTATCAGGGAACCA AGTCCAACTGCTGTTATTCAAGCAGCGACCTTAAATCATCTACTGGCATCATCTTCCAAAGAAAAAGCTTGA
Protein sequence (LotjaGi1g1v0368300.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMEYDVVEEIIYGLESGILFGMASVISKMGFLFLEQGFPKLLVPLCLIISVCSSGTGFYYQTRGLKHGRAIVVSTCAAVA SILTGVLAGMLALGERLPSAPKARLVLLLGWLLIILGVILLVGSTRVVRFLRLNSQRFKRTSVDKNHGPRRSAASRIREP SPTAVIQAATLNHLLASSSKEKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 2 | 183 | 182 | 1.2E-80 | ||
| PANTHER | 2 | 183 | 182 | 1.2E-80 | – | |
| TMHMM | 7 | 26 | 20 | - | – | |
| Phobius | 12 | 34 | 23 | - | – | |
| SUPERFAMILY | 23 | 124 | 102 | 8.5E-6 | – | |
| Phobius | 35 | 39 | 5 | - | – | |
| Phobius | 40 | 60 | 21 | - | – | |
| TMHMM | 41 | 58 | 18 | - | – | |
| Phobius | 61 | 71 | 11 | - | – | |
| TMHMM | 71 | 93 | 23 | - | – | |
| Phobius | 72 | 93 | 22 | - | – | |
| Phobius | 94 | 104 | 11 | - | – | |
| Phobius | 105 | 128 | 24 | - | – | |
| TMHMM | 108 | 130 | 23 | - | – | |
| Phobius | 129 | 183 | 55 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Magnesium ion transmembrane transporter activity | Enables the transfer of magnesium (Mg) ions from one side of a membrane to the other. | ||
| Biological process | Magnesium ion transport | The directed movement of magnesium (Mg) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi1g1v0368300.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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