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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0371400 |
| Transcript ID | LotjaGi1g1v0371400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Copper-transporting ATPase; TAIR: AT5G21930.1 P-type ATPase of Arabidopsis 2; Swiss-Prot: sp|B9DFX7|HMA8_ARATH Copper-transporting ATPase PAA2, chloroplastic; TrEMBL-Plants: tr|I1K8G7|I1K8G7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0371400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:84950063..84959152) extracted from Lotus japonicus Gifu genome v1.2.
CTTCATTTCTCTTCTCCCGCCGAATCGACGCCGCAACCGCAACCTCCACCGCCGGGAAACTCTCCGGCCACATCTCGCCG TATCAAACTCCTTCCAGACCGAGACTATCTCCACGGAATCAGCAGCTGGTCTTCCAGGCCGAGCACAGGGCGAAGACTCA CCGGTTCTACTCGACGTAACCGGGATGATGTGCGGCGCGTGCGTCTCCCGAGTCAAAAAAATCTTATCCGCCGACGACCG AGTTGACTCGGCCGTCGTCAACATGCTGACCGATACCGCAGCCGTGAAGCTGAAACCGCTCGAGGCGGAGGTGGATTCGG CGAGTGTCGCGGAGAGCCTTGCTCGGAGACTGAGCGATTGCGGGTTTCCGGCGAAGAGGAGAGCTTCTGGCTCGGGAGTG GCGGAGAGTGTGAGGAAGTGGAAGGAGATGGTGAAGAAGAAGGAGGATCTGGTTGCTAAGAGTCGGAACCGCGTTGCTTT CGCTTGGACTCTGGTCGCACTGTGCTGTGGAACGCACGCTTCGCATATTCTTCATTCATTGGGCATTCACATTCATGGTA ATGCGCTCCGATCAAAATTTGCTTGAATGCAGATACACCAAGCTGAGACGAGCGCAATTTGTAACGTAATTCGAAACCTG ACTTGCTTTTTTTTGTTTTTGCAGGACCATTTTTGGAAATTCTTCACAATTCATACGTGAAAGGTGGTTTAGCTTTGGGC TCTCTCTTGGGACCAGGACGAGGTTGGTTTCTCTATCGTTTCCCTTGTTGATAACTTCATATACTGCAACAATATGCTAT TACAAGTTTCAATAGTACCCTGATTGAATGTTAATAATGCTGTTACAAATTTGTAATGGGATTTGAACCCCCTGATGCAA ACTATTAAGACTCTTAGGACTAACCTGATCCCAATGCTTACTATACTAGACTAACTGGAATTGTTGCAGAGTTGCTCTTT GATGGCTTAAGCGCGTTTAAGAAGGGGTCGCCGAATATGAACTCTCTCGTGGGATTTGGTTCTGTAGCTGCTTTCATCAT CAGTTTGGTGAGATTTTATTTGGGATTTGAGAGTTTACAAGACAGCTAAATTTCTTTTTTTGTTTTATGTGTTGGTTAAA TTGAACTTTGTCTTTGCTATAGATCTCGCTATTGAACCCCGGGTTGGCGTGGGATGCGACATTCTTTGATGAGCCGGTTA GTTCCTTTGCTTTCAAATGTCCCCATATTTGTCATTTTAGAATTTAATTCAATTAAGAGCAAACTTTTATTCATCTTGGC TTGGGGTTTTGTTTGTCTAGTATTGATAACCTCTTACCTTGACTATCTTATAGGCACTTATAACATTCAGGTTGACAATG ATCTCCTCATGTAAGGATTTTGTCTTTTAGTATGCAGGTCATGCTTCTTGGTTTCGTGCTTCTGGGGCGTTCGCTCGAGG AAAAGGCAAGGATTCAGGCTTCTAGTGATATGAATGAACTTCTTGTAAGTTGCGACTCGATTCATCTCTTTCGTCTGATA ATATTCCAGAAAGATATTTGTGTTTCTCTTGTATTTTAGTCATTGTTATTGTTAGACCTTTTTTGTAATCTTCTTCTGGC TTCCCTGCATCCTTATTTCAATGCTTCATTATTTACTGAAAATTATGATTGATCACTTTTCCTAGGTGTAAAACTTTTCT TTTTATTTATGACCTCTTTCAGCATATGTTCCTTAAAATTTATTTTCCATATGGATTTCTATACCTGGTTATTTAATATT TCTGAAATTAATTTCGTGTTTACAAGAACAAATTGTTACATATTTTGTTGGGCTTTGTCTGATAATACATCATTCACAAA TTTGGTGAGACACTAGGACTAGAGTCTTTGGAAGCGTAACTGATTCAAAATTGTTGGAATCCACTTATGATTAAATGGCT TTTGCAGGTCACAGCATAATAATACAATGTAATGGCTTTTCATTTAACAACCCAATCTCTTTTCCATTTTCTGATCAAAT ATTATTTCTTAGAAAAAGGAAATAATCCAAGAATTGGAATTTTGGTCATGAGGAAAGTTGTCATATGAGCATTAAGCATC AGATTATATAGTTCACTGTAAAGAGTGTCATTTTTTTGTCTGTAGAGTTATATTTTGCTGTAGGTTTAATTATTTTATTG TACATGATTTCACTGTGGTGAATGTTTTTTTGCCAGTCACTGATATCTACCCAGTCAAGACTTGTGATTACTTCATCAGA AGGTTCCCCATCTACTGACAGTGTGCTTTGTGGTGACACAATTTGTGTTGAAGTCCCAACTGATGATATTAGAGTAGGTG ACTCGGTGTTGGTGTTGCCTGGAGAAACTATTCCTATAGATGTAAGCCTTTCAGATTGTTGATGATATTCTGTTAATGTT AATTGAAATCTTAATAGCTATATGCGTGGTACCTAAATTTAGGTTTAAATTAAAAGGCATCTGAAGTGCAAATATTGACC AATGCATATTAAGTTCATGGTACCTAGGACCAATTGCTACACTAATGGGCCATCCCTAGGACCAGTTGCTACGTTAATTG GCCAAATCTTCCACCAGTGGCCTATAATATTAACATTGTCATAAAAACAATCGTTCAAACCTTTTTGCTTTAAACAGGTG GCCTCCTTTCACTATTTAAAATGGAGTATATGATGAAACTTGTTGCTTCCTATGATATTGGTTAACATTATAAATTCCTG TGCAGGGAAGGGTTATCTCAGGAAGAAGTGTTGTGGATGAATCCATGCTTACAGGAGAATCACTTCCAGTATTTAAGGAA GCAGGCCTCTCAGTTTCAGCAGGAACTATAAATTGGGTAAGACTTGAAATTAATATTGAATTGTATTGTGTGATGGTTTC TCCCTAATTTCACATGCGGCTTGCATATGTGATTTTGATTTTTCTTCCTTTGATTGGGAAGGCAGCTATAAATCTATTTC TTTGGCTAACAATTTTTATTTCAGGATGGTCCTTTAAGGATTGAAGCTACTTCGACTGGCTCCAACACAATGATATCCAA GATTGTACGCATGGTGAGTATACTATATTCTGCAATTGCTTAGTTGTAAGAGATGCTGTTATAAATAGAGGCAGAGAAGG TAGATGAAGGCAGTCAGTTTTGGGTGAGAGAGGCCACTAGAACAGGTTCTGGAATCCCTGAGAAAGACACCATCATATCT CATTCCTAATCTTCTTAACCCTGGATACCCCGCTAATCCAGAGTTGGAAGGGGATATATTCAGTTAAACATCCATATTTT CTTTCTGATAATCCCTTCATTCTAATCCTGTATCTATCAGGGTGCTAATGTTTCTCTGGATATTTCGAGATTGCATTGCT GAAAGTCCATTGACTTGGGATACGTCCTTATTTTGTGAAATTTTAGGTTGAGGATGCTCAATCGCGTGAAGCACCTGTAC AAAGGCTTGCAGATTCAATAGCAGGGCCATTTGTATACAGTGTAATGACTCTATCTGCAGCAACGTTTGCATTTTGGTAA GTACTTATATTTCCACACGAAATCTTTGAGTTGATCTGTTATGATTTGTTTTGGTGATCCCTAAGGCTAGGGTTATTTGG AAGTCATGGCTATTATTAATTTACTAGGACATACATTGATGTAATCCAACCTATGTAGCCCTGACAATTCAAAAGAAAAA GAGTTGTGCCCTTTATTGTTTTCCTTGCCTGTGTTGCTGTCCATGTGTGAGTGTTGTAGAATCTTCCTGTAGGATTCATG ATTATCATGCACAATTAATTTTCCTAAGTAAAAGACTTCATGTATGGTTCATCTTACCCATTACCTTCAATGCTTTGACA AACTTGTTGCATTTATCTCCAGGTATTTTATTGGGTCACACATATTTCCTGATGTTTTGCTCAATGATATTGCGGGCCCA GAAGGAGATCCCTTGCTTTTGAGTTTGAAACTCTCTGTAGATGTTTTAGTGAGTAATTTTAACCTTGAGTCCATGATTTG TGCTTCAAGTTTGCTATTAGAACTATCTGCGTGTACTTATTGACTTTCCTTCCCTTTATCCTGAGCATGGAGCACTCCTT TTTTCTAAATTTTACCTTTGTTGTTGACTAGGAGGACATACTGGACAAAGCCCTTGCATTTGCAATTCCTTTATCTTAAC AATTTTAGTCAATGCAAATGGCTCTCGATTTGGACTTTTCACATTAGTCAGACATAATGTTATTAGCTAGTATTTGTAAT GTTATCCATCTGCAACTGACTATATCATTCAATTGCATGAGTTAATAAAAAGAATTGAAGTGAAAGAAATGAATCCGTGA AAATAGTTCAAGTTTGATATTGCTCCTGAGAAAAGGAAATTTTCTTGAAGGATAACAATTCTAGTCTTTACCCCTCTGTA GGTTGTTTCTTGTCCTTGTGCACTGGGTCTTGCCACACCGACAGCGATACTGGTTGGCACCTCACTTGGTACATCACTTG TACTTTATGCATTCAGTAAACGTAGATACATGTTACTTGAACATTGAATATATGGAAGAAATATATTCACTTTGCTCTTG AGATGAACAGCCTGCTTAATGCTCGAATTTTGCATCATTTTATCTTATACTAAGGTTTTTCAATGGCTCACTCTAATTAA TAATTTCTTATTTCATTTACCCTTTTCATTTCCTTTATTATTTCTTTCTTTCATTATTTTTTAGATCTTTTTACTATATA GCATTTTTTCTGTCTTCAATGGTTTATTTTTTGGTGCTAATCTTCTGTGGTTTATAAATACATATTACCCGATACAAGAA TCACAACTATTGCTATATGAAATAGCTGTATCTTAATCAGGTACATGTTATAAATAATTAAATAGGTGTGTCTCTATATG AGAAGAAATAATGGGGCAGCACATTCCCTCCTCTACAAGAATCACACTCTGGTGTTAGATTCTAACTCTGTAACTAGCTC TCTAACAAATTAACAATTGTTAGTTAGAGAGTTGGCTAGGACAGAGAATTAAATAGGAGGAAGATGGTTTATTGGGGGGT GACTTGGTGGTAATCTGGGTCTTGTGAGTAGAGTACTATCGAATAGTAGTGAGACTATCATTCTAGTAGAAAGATCATCT TTCTTCCTACTCTGTTACCAGTTACCACCCTGGTGTAGATAGGAGAGTGATATAATAATGAAGATTCTGATAGAAACCAG CCAAATCTGATATTATTAAATGGTAAAACCCTAATTCCCAAATAGGAATTGGGGGAAAGATACAAGGAAAGGATCCCAAA CACCCTCCCAAGAACCAGAGAGACCCAACGCTCTCTAAACCCTAATTCCAAAGTGAAAACAAAGATAACCTAATGCTCTC TAATCACTCTTATTTATAGGCAACATGCCTCTTAACCCTATAACTAACTAACAAACTACTGACCCCACTTAACTACTAGC TAGCTAACCCCGGTTATCTATCAGATTCCTTGAGTGCCTAATCTGATCCAGTTCTATCAGTATCAGATGTTTTCTCCTAT AGTTGTGAATTTGTGAACTATTATCATAAAGCATAATACTGCCTTGCAACCTGGTTTTTTATTTTTAGTATCTTCTATCT TCTTTTACTAATTCACACTATTGGCGTCTTTTAAATAACCAGGGGCAAGAAAAGGACTTCTTATTAGAGGAGGGGATGTG CTAGAACGCTTAGCCAGCATAAATTATATTGCTCTAGACAAGGTAAATTTCATGTTCATACGACTATTATCTGTCTTCTC TTTCCCTCATAAGCAAGACACAAATGTACACTATAAGGACTTGATCAGTGTGAGACTTCTCAAACATTGAATAACTTTTA AACTTGAACACATGTCCATCGATACCATTAAGAATTAGGGAGAGAAGGATCAAAAGAGAAAACCCAAATGTATGTGAGTT AGGGAGAGAAAACCCAAATATAAGAATTAGGGAGAGAATGATGTCTTATGTTTGGCTTTAATTGTACTCAGGGTTGTTAA TGGCGGATAGCGTAGTGTAGCGGCAAGCCCAAAAAACACTATTCAGAGCGCTATTGCGGCGCTATAGCGGAACGTAGCGC AAATAGCGGTGAATAGTGGAGTAGCGGTGAACCCTCAGGGTGCTACGCTATAGGCTATTGCGCCGCTATAGCGCGCTATT AACAAGCCTGATTGTACTACGTAAATACTAGCCTATATAAATCGTATATAATAAGGAACAAAACTAATCGTTAAAAAATA ATATGTAGACTCTGCCGACTTTGAACATTCACTGCACATTTCTCTCAGATAAGGGAAGAAGAAGATTGACTAACACTAAA CTTTCAGACAGGAACCCTCACTAGAGGAAAACCAGTTGTTTCTGCTATAGGTTCTCTTCAATATGGTGAATCAGATATTC TTCAGATCGCTGCTGCAGTGGAGAAAACAGCATCTCATCCTATAGCAAAGGCTATTGTCAACAAAGCTGATTCATTAGAC TTGGTCCTTCCAGTCACAAAAGGACAGTTAGTTGAACCAGGTTTTGGAACCTTAGCAGAAATAGATGGACGTTTGGTTGC AGTTGGGTCTTTAGAATGGGTCCATCAACGCTTCCAGACTAGAATGAACCCATCTAATTTGATGAATGTGGAACAGACTT TGCTAAATCATTCATTGAATTCAACATCTTCAAAGTATTCAAGAACTGTTGTCTATGTTGGACGTGAAGGAGAAGGCATC ATTGGTGCTATAGCCTTATCTGACATCGTGCGTGAAGATGCTGAATCTACTGTGATGAGGTATTTTTATTTTGCTGTGTG TATGTGTTCAGAATACTACCCACGCATTTCAGGAAAAAATAAAAACTACTTCTGCTGACCAGAGGTGAAGTTGCTTTGCT TCCTTCAGAAAGAGGGGCAGTGCATCTTTTTTGGTTCTACCTACGCGAAGCCTTCATTGCAAGCTCAAAGCTAACACAGT CATGTTCCCTTTTCTTATCCATTTGTTAGTTCTTGATGAAGTTGTAAGAATGAAATTTGATAAAAAAATATTTCTACTAT CTTGCAACCGCCCAACTGGTCTCATTGGCCTAATTAACTACTTGAGCAATTAATTACTCCTACACTGGAAATACTTTTAT CAAGAATTTAAATTTTTTATGCATGTTGTTTTGCTCTGACTGCCTATTCCTCTAAAAAAGGTTTAGGAAGTTTTATGGCA TTATTCTGAGGTCACAATTCACATTATAATATTCATGTCAATAAGATTATATAGATTTGAATTTAGTCCTTGCTTCTTTT ACATTTCTTTTTATGAGACGGGAATTGTATCAATGGCTGCTACCATCATGTTAAACCCTTAAACTTATGCCTTACTTTAC ACTTGATGTTATGTATTTCCTGCATTCATTAGAATTATTTGCCAAATTCTTGTGTGTGTTCTTTTAATTGCTTGATGCGT GCTTTTTCTGTCTGACTATGTTGTTATTATTGGAAGGCTCAAGCAGAAGGGGATTAAAATGGTTCTCCTATCCGGAGACA GGGAAGAGGCAGTTGCAACCATTGCAGAGACTGTTGGAATTGAAAATGATTTCGTCAAAGCATCTCTGGCTCCACAGCAG AAATCTGAATTTATTTCTTCTCTGAAAGCTGCTGGGCATCATGTTGCAATGGTATGATGACATCTGTACTTACTCAAGTC CCACCTCACCCCACCTACTTTAATAACTCTCTCTAGCTAAATAGAGAATCATGCAATGATAATAGGTTCATTGAACTCTC TAAAACTAGTGAATATGATCTTTTCATAGTTGATTGGAATATTCAATGGTGAAAACTGGAACTAACCACATACACATTAT ATTATAGCTATAAGTGATGAAATTGTTGAAATATCAACCATCATTTTTCAATCAACGATTGGAAACTCTTAATTTACCTG GTAAAGTTCTCATTTTTTAGTTTTGATACATTTTAGACGACCTAAAACCTAAATTCATGTATCAATAACACTAAAGAATT AGATCTTGTTTTGTTTTTCTTTTGGAAGTTGTTGAGAGATATTTATGCTTCTGGAGCAGCTCCACTCTAAAATCCTTTCA ATATAGGCATCATTGTATGGATATTTTTGTCGGGTATTGTGGAAAATGGAACTTGACTGATGCATCTAGCAATGAACAGG AAATGGCATTTTACTAAGACATTCTTTTTGCTCCCGTTCTCTAAGGTAGGTGATGGGATAAATGATGCACCTGCTTTGGC TGTAGCTGATGTTGGGATTGCTCTGCAGAATGAAGCTCAAGAGAATGCTGCCTCCGATGCAGCATCCATTATACTTCTGG GGAACAAAATTTCACAAGTATGTCATTTCTGATGTCTGGATAGTTTGCTCTTGTGCATCCCTTTTTCTTTTGTTAATCCA AGTGGGTAGCAGAAGGTTAAATTTGATTACCCAAAATTCTCCTCACTTGTTTGCTGCTTGATACAAATATCTGCTCAAAC AATCACCTGTCTGATACAAAGTGATGTATGGTTCTTTAACGCATAACAGTCTTGTGGTTCTCTTAATACTGTGCATATGT GCTACACAAGCCACCACATGGTTCTCTATCCTCTTAGCTTCCTGACTTCTAATTAACAGGTTGTCGATGCAATAGACCTA GCACAGTCAACAATGGCGAAAGTGTACCAAAATTTGTCTTGGGCAGTAGCCTATAATGTTATTGCCATTCCCATTGCTGC TGGCGTGTTACTTCCCCACTTTGACTTTGCTATGACACCTTCACTTTCAGGTGAGCAACATTGTCTGCTCGCTTCCTTAT TTTTTATGTTGTAATTGTTGTCTTTCTTCATATAGTTTCTGAACATACAATGTCACCCTTGATATTTAATTTCAGGAGGA ATGATGGCTCTGAGCTCCATCTTTGTGGTTAGCAACTCACTGCTTCTACAGCTCCATGGGTCTCAGACTTCCAGAAAGGG CTCACTGACATGATAACATATCTTCCATCCATATGAAAATTTATTTGTATAATGTAAAAAAAATAAAACTGTTTTCACAG CACTTTGAATCACATCATACTATAAACTATTTTTTAAAAATTCTTTTACA
CDS sequence (LotjaGi1g1v0371400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACCCATCTAATTTGATGAATGTGGAACAGACTTTGCTAAATCATTCATTGAATTCAACATCTTCAAAGTATTCAAG AACTGTTGTCTATGTTGGACGTGAAGGAGAAGGCATCATTGGTGCTATAGCCTTATCTGACATCGTGCGTGAAGATGCTG AATCTACTGTGATGAGGCTCAAGCAGAAGGGGATTAAAATGGTTCTCCTATCCGGAGACAGGGAAGAGGCAGTTGCAACC ATTGCAGAGACTGTTGGAATTGAAAATGATTTCGTCAAAGCATCTCTGGCTCCACAGCAGAAATCTGAATTTATTTCTTC TCTGAAAGCTGCTGGGCATCATGTTGCAATGGTAGGTGATGGGATAAATGATGCACCTGCTTTGGCTGTAGCTGATGTTG GGATTGCTCTGCAGAATGAAGCTCAAGAGAATGCTGCCTCCGATGCAGCATCCATTATACTTCTGGGGAACAAAATTTCA CAAGTTGTCGATGCAATAGACCTAGCACAGTCAACAATGGCGAAAGTGTACCAAAATTTGTCTTGGGCAGTAGCCTATAA TGTTATTGCCATTCCCATTGCTGCTGGCGTGTTACTTCCCCACTTTGACTTTGCTATGACACCTTCACTTTCAGGAGGAA TGATGGCTCTGAGCTCCATCTTTGTGGTTAGCAACTCACTGCTTCTACAGCTCCATGGGTCTCAGACTTCCAGAAAGGGC TCACTGACATGA
Protein sequence (LotjaGi1g1v0371400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNPSNLMNVEQTLLNHSLNSTSSKYSRTVVYVGREGEGIIGAIALSDIVREDAESTVMRLKQKGIKMVLLSGDREEAVAT IAETVGIENDFVKASLAPQQKSEFISSLKAAGHHVAMVGDGINDAPALAVADVGIALQNEAQENAASDAASIILLGNKIS QVVDAIDLAQSTMAKVYQNLSWAVAYNVIAIPIAAGVLLPHFDFAMTPSLSGGMMALSSIFVVSNSLLLQLHGSQTSRKG SLT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 179 | 179 | - | – | |
| PANTHER | 9 | 238 | 230 | 2.8E-100 | – | |
| PANTHER | 9 | 238 | 230 | 2.8E-100 | – | |
| TIGRFAM | 16 | 209 | 194 | 7.6E-41 | ||
| Gene3D | 21 | 48 | 28 | 6.9E-47 | ||
| Pfam | 27 | 132 | 106 | 2.8E-22 | – | |
| SUPERFAMILY | 28 | 226 | 199 | 2.96E-40 | ||
| PRINTS | 41 | 52 | 12 | 2.6E-12 | – | |
| Gene3D | 49 | 172 | 124 | 6.9E-47 | ||
| PRINTS | 63 | 73 | 11 | 2.6E-12 | – | |
| PRINTS | 118 | 137 | 20 | 2.6E-12 | – | |
| Phobius | 180 | 199 | 20 | - | – | |
| TMHMM | 180 | 202 | 23 | - | – | |
| Phobius | 200 | 210 | 11 | - | – | |
| Phobius | 211 | 229 | 19 | - | – | |
| TMHMM | 212 | 229 | 18 | - | – | |
| Phobius | 230 | 243 | 14 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi1g1v0371400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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