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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0371900 |
| Transcript ID | LotjaGi1g1v0371900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT2G05940.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9ZUF4|RIPK_ARATH Serine/threonine-protein kinase RIPK; TrEMBL-Plants: tr|A0A0L9UHE2|A0A0L9UHE2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0371900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:85007972..85010708) extracted from Lotus japonicus Gifu genome v1.2.
AAGGTGGTTGGTTAGGACTTAGGACTTAGGAGAATGCATTTGGCATAAATTTCTCAGCTTTCACTTATTTTTAGTGTCAC CAGTTATGCCATCTTCTATGTTGCCTTCATAGTTCATTAGATATAAGATAGAAGGTGTTTTATTTGTAAGATAATTCTAG ATGAGTTCTAAAAAGATTACATGGAAGTCTATTGTCTTCATCTTAAGTTGTTATAAGACCAAATTCCCTTTGCAGGAATC AGAAAAACAGGTTTTGAAACATGGTTCTTTCCAAAGGCTATGTCTCTCAGATGTAAGCATTTCAAGCACTAATCAAGCCA TTGAGGATCTTTCTATTTCTTTTGCTGGCTCAGAGCTTTACACATTCACTCTGGAGGAGCTCAGAGAAGCAACACATGAT TTCTCATGGAGTAATGTGCTCGGTGAAGGCGGATTTGGACCCGTGTTCAAGGGTTTTGTTGATAACAAACTCAGGCCTCG TTTGAAGGCTCAGCCTGTTGCTGTGAAACAATTGAACTTGGATGGGTTACAAGGTCACAGGGAATGGCTGGTTAGATTTC TGAAGCACCCTTAGCTTTGCTTTACTCACAAATTAATTTGAAAATGCTACTGCTTTGAATATAATTTAGCTAATAAAACA TTTTTCTGGTACATAAAAATTTAGGGTGAGGGTATGATGCCTCCGCTTAAGGCAGAGAAAGTTGTCGGGCTTAAAGAGCC GTTACAAAATACTTACATATATTATATTTTCTTTTATAGGCGGAAATTATATTCCTTGGACAGCTGAGACATCCACATCT TGTTAAGCTAATTGGATACTGTTGTGAGGAGGAGCACAGGCTTTTGGTGTATGAATACATGCCAAGAGGAAGCTTAGAGA ATCAATTGTTCAAAAGTATGTTGCATTTCTTGTTCAAAAGTATAGCTAGGGATATATATTTGAGAAGAATCAATTGTTCA AAATTATTTTCTTCTTTTTGTTTTGTTCTGATACAAGCAGGGTACTCTGCTGCCTTACCATGGTCAACCAGGATGAAAAT TGCATTAGGTGCAGCTAAGGGTCTGGCCTTCCTTCATGAAGCAGATAAACCTGTAATATACAGGGATTTCAAAAGTTCCA ATATCTTGCTCGATTCGGTATGTCTCCTCCTAGTGATCCCAAATTCACCATTAACATTTACGTTGGGATCACTATGTCTC CTCCTAGTGATCCCAAATTCACCATTAACATTTACGTTGGGATCACTGGATATATACTAAAGAACACTTATTATAGTTTA TCTAGTGTTTCTTTTTCTAGTAGATAAGCTTCAATAAGTTCCAATAAACTCGCATCCAAACTGTGGTAATAAACTAACAA AAGAGCAATAAGGTCCTCATTTTAGTTTATTTTAGGTCATATTTTTCTTTCTTAATTCTTGATTAAGGATTAATTTGACA GATAAAAATAAAGGTGGAGGACTACTATGATCTTTAAAAAATAGATTGATGACCTATTACTATTTTATTAAGTTTAGGGA GTAAACTTAATATAAAATAGATTACACAGCCAAATCTTAAAAAAAAAAAGATTAATTTGACAACCTTTAAAGAAATTGAG TTTATGATCTCATAATTTTTTCTTGTATGTTTTTTCCAAATCCAGGATTACACAGCCAAACTATCAGACCTTGGGCTAGC TAAGGATGGTCCTGAAGGGGAAGACACGCATGTAACCACAACATGCATAATGGGAACAAGAGGATATGCTGCTCCTGAGT ACATAATGGCAGGTATAGATAGATTACAATTTATTTAATTACTACTTTTCACCAACTTTGATTTGTCCTATTGCATTGTC ACTAGATTGATTTCTCAGAAACACAATTATTTTTCTCCTTCCCTCACAAGTTAGAAACAACATCACACTATGCATGTTTG AAAGTTTTTCTATAATTAATTTTAAAATCAGAATCAATTTTGAGAAGAAGCTTATGTGAGTAGCTTATAGATTCCATAAT TGATTATGTCGAAGAGAAATTGATCCAAACATGCTATGAATTAGTTACTTGTACATTTTAATCTGAAGCAGATTCATTGC AGGTCACCTTTCTACCAAGAGTGATGTGTATAGCTATGGAGTTGTGTTGTTGGAATTGCTTACCGGAAAACGGGTACTGG ACAAGACCCGGCCAAACCGAGAGCGGTTCCTGGTGGAATGGGCAAGGCCTCTTTTGAGAGATCAAAGGAAACTGCAGCAT GTCATAGACCCAAGATTGGAATGGCAGTTTCCTATGAAAGGAGCTATGAAGGTTGCTGCATTGACTTATAAATGCTTGAG CCACCACCCCGCTCCAAGGCCCACTATGAATGATGTGGTAAGGATATTGGAGACACTTCAGGACTTTGATGATGTTATAA TAGGACCATTTGTGTATTTTGCCATTGGTGAAAGTGGCCAATGAGATATTGTCATAGGGGTGCTGTAGGATTGCCTAATA AGGAGATGAATTACCATCCTGCAGTGTTCCCAGGCACATAAATATGAACCTCTGCATTTTGGTAACACCAAAAATTAAAG GAAACGTTGAATATCTATTAAGATTTAGTTTATTATTAGTCTTATCTCATAGAGATATTGTTAAGATTTGTTTATCTATT TTAGATTAGTATCTATTTAAACAGATATGATATCTATTTAAATAGAGATATGTTTAGATAAATTTAGTTTGTTTTAATCT CTTTGTTAGTCTATATA
CDS sequence (LotjaGi1g1v0371900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTTCTAAAAAGATTACATGGAAGTCTATTGTCTTCATCTTAAGTTGTTATAAGACCAAATTCCCTTTGCAGGAATC AGAAAAACAGGTTTTGAAACATGGTTCTTTCCAAAGGCTATGTCTCTCAGATGTAAGCATTTCAAGCACTAATCAAGCCA TTGAGGATCTTTCTATTTCTTTTGCTGGCTCAGAGCTTTACACATTCACTCTGGAGGAGCTCAGAGAAGCAACACATGAT TTCTCATGGAGTAATGTGCTCGGTGAAGGCGGATTTGGACCCGTGTTCAAGGGTTTTGTTGATAACAAACTCAGGCCTCG TTTGAAGGCTCAGCCTGTTGCTGTGAAACAATTGAACTTGGATGGGTTACAAGGTCACAGGGAATGGCTGGCGGAAATTA TATTCCTTGGACAGCTGAGACATCCACATCTTGTTAAGCTAATTGGATACTGTTGTGAGGAGGAGCACAGGCTTTTGGTG TATGAATACATGCCAAGAGGAAGCTTAGAGAATCAATTGTTCAAAAGGTACTCTGCTGCCTTACCATGGTCAACCAGGAT GAAAATTGCATTAGGTGCAGCTAAGGGTCTGGCCTTCCTTCATGAAGCAGATAAACCTGTAATATACAGGGATTTCAAAA GTTCCAATATCTTGCTCGATTCGGATTACACAGCCAAACTATCAGACCTTGGGCTAGCTAAGGATGGTCCTGAAGGGGAA GACACGCATGTAACCACAACATGCATAATGGGAACAAGAGGATATGCTGCTCCTGAGTACATAATGGCAGGTCACCTTTC TACCAAGAGTGATGTGTATAGCTATGGAGTTGTGTTGTTGGAATTGCTTACCGGAAAACGGGTACTGGACAAGACCCGGC CAAACCGAGAGCGGTTCCTGGTGGAATGGGCAAGGCCTCTTTTGAGAGATCAAAGGAAACTGCAGCATGTCATAGACCCA AGATTGGAATGGCAGTTTCCTATGAAAGGAGCTATGAAGGTTGCTGCATTGACTTATAAATGCTTGAGCCACCACCCCGC TCCAAGGCCCACTATGAATGATGTGGTAAGGATATTGGAGACACTTCAGGACTTTGATGATGTTATAATAGGACCATTTG TGTATTTTGCCATTGGTGAAAGTGGCCAATGA
Protein sequence (LotjaGi1g1v0371900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSKKITWKSIVFILSCYKTKFPLQESEKQVLKHGSFQRLCLSDVSISSTNQAIEDLSISFAGSELYTFTLEELREATHD FSWSNVLGEGGFGPVFKGFVDNKLRPRLKAQPVAVKQLNLDGLQGHREWLAEIIFLGQLRHPHLVKLIGYCCEEEHRLLV YEYMPRGSLENQLFKRYSAALPWSTRMKIALGAAKGLAFLHEADKPVIYRDFKSSNILLDSDYTAKLSDLGLAKDGPEGE DTHVTTTCIMGTRGYAAPEYIMAGHLSTKSDVYSYGVVLLELLTGKRVLDKTRPNRERFLVEWARPLLRDQRKLQHVIDP RLEWQFPMKGAMKVAALTYKCLSHHPAPRPTMNDVVRILETLQDFDDVIIGPFVYFAIGESGQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 5 | 380 | 376 | 1.0E-223 | – | |
| PANTHER | 5 | 380 | 376 | 1.0E-223 | – | |
| Gene3D | 42 | 163 | 122 | 6.0E-33 | – | |
| SUPERFAMILY | 57 | 362 | 306 | 1.27E-80 | ||
| ProSiteProfiles | 81 | 362 | 282 | 37.573 | ||
| Pfam | 83 | 359 | 277 | 7.8E-47 | ||
| Gene3D | 164 | 369 | 206 | 6.1E-59 | – | |
| ProSitePatterns | 207 | 219 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0371900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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