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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0379800 |
| Transcript ID | LotjaGi1g1v0379800.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase family protein; TAIR: AT5G11020.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q0V7T5|Y1864_ARATH Probable receptor-like protein kinase At1g80640; TrEMBL-Plants: tr|A0A151TT79|A0A151TT79_CAJCA Serine/threonine-protein kinase PBS1; Found in the gene: LotjaGi1g1v0379800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:86103533..86107318) extracted from Lotus japonicus Gifu genome v1.2.
ATAGATTATTTAGATAAACCTTTTTTCATATCCCTTTCTTTTCTCTCTATTTTCTTTTTATATTGATGTCTACATAATAA AAATGTTAGATGTCTACATAATAAAAATGTTAGCACATACACACACTCTTTGGGTCTTGCTTGTGCTTCTTGTTCCTTTC TCTTCCCTCTGCATATCTTTATCCATACGTATTCTTATTTCTTTGGGAATTAGGACACACAACAATACACCATGAAAATG AAGCTTCTTCTTATGCTTCTGATGCTTCCTCCCATTCTCCACCAACCCATTTCGGTTCACGTCGCTGCCGCAGACCCTCT TGTTTCCTCCGCACAAGTTCCACTTTCCTCAGGTACTCATTTATCATCTCTCATTCTCTACTTAATCTCTGTTACGTTAG CTTAATAGTATTTTGTTTCTACCTTGTTATCAGTTATTCAGGTGGAGGAGCACCACCACCAAAAAAAACTGAATAAGAAT GTTGTAATAATCCTCGTAGCCAGCACTGCACTTGGTACTGTCATTTTGAGCTCGTTATGCTTCTGGATTTATCATAGGAA GTATCGAACAAAATCCACTAGGAACAATGTTCAAACCCCGGGTATTTATAATCAATTTTGCACTATCCCATTTCTCAGAT TTTTACTTTTTTGTCTTCAACAAACTTCTACCTACATTCTGATTTTGAATGTGAAGATGCAGAGAAGGGGCTAACATTAG CACCAATTTTGAGTAAATTCAGTTCTGTCAAGCTGGTTGGTACTATGAAGGGTTCTGTTCCAGTAATAGATTATGAGCAA ATAGAGAAAACCACCAATAATTTTAATGAAAGTAACATCTTGGGCGAGGGCGGTTTCGGCCGCGTTTACAAGGCTCGATT GGATGATAAATTGGATGTTGCTGTCAAGAAGCTACACTGCGAAAATCAGAATGCTGAAAGAGAATTTGAGGTAAAGATTT ATTATACATTTCCTGTTTGTGTTATTTTAGTTTTTTTTTTTTTTTTTTTTTCTATTTTGTGTTGAATAGTTTGATGAATT TGCAGAATGAGGTGGATTTGTTAAGAAAAATTCAGCATCCAAACATAGTTTCTTTACTAGGTTGTTGCATTAATGGCGAT ACGAGGTTTATTGTGTGTGAGTTGATGCAAAATGGATCCTTGGAAGCTCAGTTACATGGTAAAATATTTCATAGGAGAAG ACACATTATTTTCAATTGTGAAATTATACTCATCTGTTTTCTTTTTGTCCAAAATTTGATATTGAAGGACCATCTCATGG TTCAGCATTGAATTGGCATATGAGGATGAAGATTGCTCTAGATACAGCAAGGTAATCTTCCTTAATAAGTTCTCAATCTT TGTATTGCATGTTTGTTAACATACTTTTGGACTCTAATCAGAGGATTAGAATATCTGCACGAGCACTGTTACCCTGCAGT AATACATAGAGACATGAAATCTTCTAATATTCTTTTAGATGCAAAGTTCAATGCCAAGGTAAGAATCTGTATTGAAATTG CTATGAAATTGATTTCCCCTTTCTATTCTAAATTGTTTTCATAAATGGTTATTCTTGGTGGTGGATTCAGCTTTCTGATT TTGGCCTTGCCATAACTGATGGGTCCCAAAACAAGAACATGAAGCTTTCTGGCACCTTGGGCTACGTAGCACCTGAATAT CTTTTAGATGGTATCTCAACTAACTTGTTTATGATTTCACGCCATTTACATTGGTCTGACAAGTTGCCATATCTTTAATG TATTGTTATTAATCTTTCAACAAACCATACCCAAGATATTGTTTCTTTTGGAGCCTCATTGAATTCAATGACATCATGAG TTTAGGGTGGTATTGAATTTGAAACATATGATCGATGCATTTTGTTCTCATCTTGGGCAGATATACCTGCCCATCTAACG TATCATCTATATTAATCTGAATGGACTCTTAGCATGTTTGAATCAATTTTTCCCCTCATAATCAATTATGACACTCAGAA TCTACTCATATAAACTTCACCTTAGAATTGATTTTTCCTGCAGAATCAGTTGTAAGAGATTTTGCAAACATTCAGTATGA TATGACTAACATGTTACAATCTCATAGGCTGATAAGTCTAGTTTGCTCTGGAGGTTGGGAGCAGAAAGTTATGGCTCAAT AAAAGTATCAGCAAATAATTGCGAATTGGAAATTAATTCTTGTTTGATAAATGGGAAACAAGAAATAATTTGGTGGTGGC TCTAGATTTTTTTAATTGAAGTAGATATTATATAATGAAATGGATCATTATTCCATTGACATAATATTATACAGTAGATA TTATGGAGAAATAGCTTACACCTGTACAAGCTTAATCCATGTGACAATGTGAAACATAGCATCTATACCAAAACCTCTAG AATTTTTTATTAAGGAGATTGCAGTTCAATAATTTTGCAGGTAAATTTTTTTATTAAGGAGATTGCAATTCAATAATTTT GCAGGTAAATTGACTGATAAAAGTGATGTCTATGCTTTTGGGATTGTTCTCCTGGAACTCTTATTAGGAAGGATGCCTGT GGAAAAACTAGCACCATCTCAGTGCCAATCCATTGTCACATGGGTACGGGCTGCTTTTAGTCCCATGAAGTCTAATTCAA TCAGTTTGCATTTCCAAGAATGGATTTTGATGATGGTGACATAACCATTTATGATTGCAGGCCATGCCGCAACTCACAGA TAGGTCCAAGCTCCCAAACATTGTTGATCCAGTGATTAAGAATACAATGGATCTCAAGCACTTATACCAGGTTTGTCCTT GAAGTCAGAACTCAGACACACCGAATGTGTTTGAATCAGCTTCCATTTTTATATAAAAATCTCCGAAACCTAGGAGCTAC TCATATAAACTTATCCCCTGAATTGGTTGTGACTTTAGAATCAATTGTAAAAGCAAAATTGTCTCAATTATGAACTTTGC ATGGTCTTCAGTTTTGTGGGCTTTGTATCTTGCAGGCTTCTGCGGTAGCAGTGCTGTGCGTGCAACCAGAGCCCAGTTAC CGCCCTTTGATAAAAGATGTTCTGCACTCGCTTATCCCTCTTGTTCCCATGGAGCTTGGAGGAACACTGAGAGTTTCACA AGTGACACTACATGGCTCTCTTGATGATCCACCTCTGACTCCAGTCATTGATTGAAGCCTAGCAATTTGATACACGCTAA ATGGTGAGAATCCACTGTCAATCCAGGACATGATTTGTGATTATGATGCTGGCATATATGGTGGCGAGAAGAGCAATGGA TCGGGGATAACAAATGTAAGAGACAATCCTACTTGAGTGACAAAGCTCTTCTTTTGAGTCTTGAGTGCAACTCTTTGTTC AGGCTCAAACTCAAAATCACTGATTAACTAGCTATTAGGTAATGTATGTGCTCAATGGTACTATGTATAGAGATTTTCAC ACTTAAAAAATAATAACTCACTTGTAATGTAAAAGCATTGTTCCGGCCGTTAAATAATGAATTCAGACAGCACCTCTTTA GAAAACCAAACCAGAGTGTGCTTTCTTAAGATCCAATGAAAGTTCTAGGCTTCAAAGTGATTTGTAGATGACATATTTGA ACTTACAACTAATAACTTGGCAAAAAGAAATTTACAACTAATATGGTGTTACATTTTCAGCCTGTCATTGACATATTTTC CTGCTTCTTTTTTATTTATTGCTGAAGGAATTTTATGATGGGTTGACTTAGATTAATTTTGGTGTGGATTGACAATTTAT TAGTTTTATTTGTCCATGAAAAATAT
CDS sequence (LotjaGi1g1v0379800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGGTTCTGTTCCAGTAATAGATTATGAGCAAATAGAGAAAACCACCAATAATTTTAATGAAAGTAACATCTTGGG CGAGGGCGGTTTCGGCCGCGTTTACAAGGCTCGATTGGATGATAAATTGGATGTTGCTGTCAAGAAGCTACACTGCGAAA ATCAGAATGCTGAAAGAGAATTTGAGAATGAGGTGGATTTGTTAAGAAAAATTCAGCATCCAAACATAGTTTCTTTACTA GGTTGTTGCATTAATGGCGATACGAGGTTTATTGTGTGTGAGTTGATGCAAAATGGATCCTTGGAAGCTCAGTTACATGG ACCATCTCATGGTTCAGCATTGAATTGGCATATGAGGATGAAGATTGCTCTAGATACAGCAAGAGGATTAGAATATCTGC ACGAGCACTGTTACCCTGCAGTAATACATAGAGACATGAAATCTTCTAATATTCTTTTAGATGCAAAGTTCAATGCCAAG CTTTCTGATTTTGGCCTTGCCATAACTGATGGGTCCCAAAACAAGAACATGAAGCTTTCTGGCACCTTGGGCTACGTAGC ACCTGAATATCTTTTAGATGGTAAATTGACTGATAAAAGTGATGTCTATGCTTTTGGGATTGTTCTCCTGGAACTCTTAT TAGGAAGGATGCCTGTGGAAAAACTAGCACCATCTCAGTGCCAATCCATTGTCACATGGGCCATGCCGCAACTCACAGAT AGGTCCAAGCTCCCAAACATTGTTGATCCAGTGATTAAGAATACAATGGATCTCAAGCACTTATACCAGGCTTCTGCGGT AGCAGTGCTGTGCGTGCAACCAGAGCCCAGTTACCGCCCTTTGATAAAAGATGTTCTGCACTCGCTTATCCCTCTTGTTC CCATGGAGCTTGGAGGAACACTGAGAGTTTCACAAGTGACACTACATGGCTCTCTTGATGATCCACCTCTGACTCCAGTC ATTGATTGA
Protein sequence (LotjaGi1g1v0379800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKGSVPVIDYEQIEKTTNNFNESNILGEGGFGRVYKARLDDKLDVAVKKLHCENQNAEREFENEVDLLRKIQHPNIVSLL GCCINGDTRFIVCELMQNGSLEAQLHGPSHGSALNWHMRMKIALDTARGLEYLHEHCYPAVIHRDMKSSNILLDAKFNAK LSDFGLAITDGSQNKNMKLSGTLGYVAPEYLLDGKLTDKSDVYAFGIVLLELLLGRMPVEKLAPSQCQSIVTWAMPQLTD RSKLPNIVDPVIKNTMDLKHLYQASAVAVLCVQPEPSYRPLIKDVLHSLIPLVPMELGGTLRVSQVTLHGSLDDPPLTPV ID
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 95 | 95 | 2.1E-32 | – | |
| PIRSF | 2 | 293 | 292 | 1.4E-43 | – | |
| PANTHER | 5 | 302 | 298 | 1.7E-142 | – | |
| PANTHER | 5 | 302 | 298 | 1.7E-142 | – | |
| SUPERFAMILY | 5 | 289 | 285 | 4.99E-80 | ||
| ProSiteProfiles | 20 | 290 | 271 | 41.036 | ||
| SMART | 20 | 290 | 271 | 1.1E-44 | ||
| Pfam | 21 | 287 | 267 | 1.0E-51 | ||
| ProSitePatterns | 26 | 49 | 24 | - | ||
| CDD | 26 | 292 | 267 | 1.71695E-93 | – | |
| Coils | 47 | 67 | 21 | - | – | |
| Gene3D | 96 | 295 | 200 | 5.4E-55 | – | |
| ProSitePatterns | 141 | 153 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0379800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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