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LotjaGi1g1v0381100.1

Overview

Field Value
Gene ID LotjaGi1g1v0381100
Transcript ID LotjaGi1g1v0381100.1
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Flotillin-like protein 1; TAIR: AT5G25260.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family; Swiss-Prot: sp|D2XNQ8|FLOT1_MEDTR Flotillin-like protein 1; TrEMBL-Plants: tr|A0A0R0JJ08|A0A0R0JJ08_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0381100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:86337395..86342260) extracted from Lotus japonicus Gifu genome v1.2.

CATTTTTTTTCATAAAACCCCGTCAGGGCAGTAGTATTCATTATTTGAAAGAAGAATAGATATATTGTTGGTATTTGTAA TGTAAGAAGTTTCAATTTCTAAAAAAAAAAAAAGAGGAAATATTCTAAAAAATAAAGTAAGTGGACCTAACCCATTGAAT AATAATTATATCTACTATTCTGATATTCAAATTCGATAGAAATGAAATTCTAATAGCAGATCTTTTTTTTAATACTTCTT TTTTGGTTTGAATTCCGTAAGAATTCGTAGATATTTCCGAGGAAATCTTATTGTTCCTAGGGGTTCTATAAGAATAAATT GCCACTCTCCTTCTCCACGAAGAAGAGCTTATTCTAATCTAAGTTCCAACATACAAGTCATTTGAATTTAAAATAGATTT TATTTCCGAACACAAGAAAAGATCAATTTATATTTGTATTATTTCTATAGACATATCATATATTAAAGAAATATATAGAA ATATACATCAAATCATGACTTCGCATATTTATTAAATTTAATATTTTCTTTTCATATCGAGACCGATCCATACGAAATTT TTAGGGCAATTAATAGATTGTAAGAGAAAGTCTGTCTATAAAAAAAAATTCCATATAATATTCAAAAATCTAACAGATGG ATAATAAAACAAAATAGAAAAAATATTCTAATTTCTTACCTCGATCTGCAAAAAAAAAAGTTTACTTTGTAGTTTTTTTT CTTAATCCGAAAAAGAGGACAATAGAACAAAGAAGACAAGAAAAGAAAAAATGTAAAATAGAAAATAATATTGTCCTGTA GTAATTTTCTCGACATAGAAATTTTCAAAATATCTGAAATTGATTTCTATTTTTTTCACGAACAAGATTCAAGAATCAAT TTATTTCATGAAAGGATAGCAGTATGTCAGAGGATCCATTATGGTGGCGAGAGTTAGAAAAGATATTATTTATTTGTTTC TTGAACAATTCTTTAAAGAATTTATCTATTGGATTTCTTTATGAGTCATAAAATAAAACAATTCCGAATGGATTCACGGC TTAGGGGATTTTGAATAATATCGAAACAAATAACCGAATTGAATTTCATTGATTTTACCTAGGTATCAATAAACCAGTAA ATGATTTTTTTATTCGAAACCCATTAGAAGGGGCAGTATACGAGAAAAAAAATATAAATATATAAATGAAATAAATATAT AAATGAAATAAAGCAACTCCAAGGTCCAGTCCTTGAAAATATTATGAGGTGTTCGAAAATGGTTGAAGTAGTTGAATAGG AGGATCACTATGACTATAGCTCTTGGTAAATTTACCAAAGATGAAAATGATTTATTTGATATTATGGATGACTGGTTACG TCGGGACCGTTTCGTTTTTGTGGGTTGGTCCGGTCTATTGCTCTTCCCTTGTGCCTATTTCGCCTTGGGGGGTTGGTTCA CAGGTACCACCTTTGTAACTTCATGGTATACTCATGAACATGCAAAACATAGCCATTATCTCTATCTTTAATTATTTGTC ACAGTTTTACGTTATCTTTATATATATACACATATTCATTGGTTCATGTTTTGTAAGCTCTTGTTATCAAAAACATATTC ATTGGTTCATCTCATTATAACTTCTTGCTTTTACAATCACATTGATCTCACAGTCACACATCACTCTTTTAGAAAAGAAA GAAAAGAAGGAGCAATCATGTGGAAGGTTGCAAACGCATCGGAATGCCTGGTTATCACTGGAATCGGAATCGACGACATC AAGTTGGCCAAGAAAGCATTCATCTGCCCCGGCCAATCATGCACTGTCGTTGACCTCTCTCCGGTGAACTACACGTTTGA GGTCCAAGCCATGAGCGCCGAGAAGCTCCCATTCGTCCTTCCTGCCGTCTTCACCATCGGCCCTCGTGTCGATGAGAACG AGAGCCTCCTCAAGTATGCCAAGCTCATCTCCAAACATGACAAGCTCTCTAACCACGTGAAAGAGCTTGTCCAGGGGATC ATCGAGGGCGAGACGCGTGTTCTCGCAGCCTCGATGACCATGGAAGAGGTTTTCAAAGGCACAAAAGAATTCAAGCATGA AGTGTTCGGGAAGGTGCAGCTCGAGCTTAACCAATTCGGCCTCCTCATCTACAACGCCAATGTCAAGCAGCTCGTTGATG TTCCTGGCCATGAGTATTTCTCTTACTTGGGGCAGAAGACTCAGATGGAGGCTGCAAATCAAGCCAAGGTAATAAACCTT AAACCCAAAATCAATTAGTTCTAAAATGTGATTATCAATTTGTTTTCATTCCATTGGTTAATTTTTTTTGTTGGTTATGT CTATGGTGAAATTAGGTGGATGTGGCTGAGGCAAGGATGAAAGGGGAGGTTGGGGCGAAGTTGAGGGATGGGAAAACGCT TCAGAACGCAGCGCAGATTGACGCAGAGACGAAGATCATAGCCACGCAGAGGCAAGGGGATGCGAAGAAGGAGGAGATAA AGGTGAGGACGGAGGTGAAGGTGTTTGAGAATCAAAAGGAGGCTGATGTTGCAGAGGCTAACTCTGAGCTTGCTAAGAAG AAGGCTGTGTGGGCTCAGGCAGCGCAGGTGGCGGAGGTGGAGGCCGCAAAGGCGGTGGCGCTCAGGGAGGCGGAGTTGCA AGGGGAGGTGGAGAGGATGAATGCTCTGACCATGACTGAGAAACTTAAGGCTGAGTTCCTCACCAAGGCAAGCGTGGAGT ATGAAACCAAGGTAATACTAAATGATCATTCATTTGTTCTTTATTTATAATACAAATTAATTTGTGTAATAGTATCAAGT TTGATAGTGCATTAGAGCCTGAAATCCAAAAGTTAATACTAAGAATTTCTAGTGTAAACTAATTAGAAGCCGACTTGTAG TGGTGAGACTAATTCCCCACCTATAATTAGCATATTAAGAATTACTAGCATAAAATATTCAGCATAGTAGTTAATTTGTA CATATGCAAGACCATGTTGGAAATATGGATGCAGTATCTGTTTATTCTAATGATGGAAGAGCATTAGAGCAGTTGACCAT TTCATAGCTACTAACGTGCTGCTTTATTAAAAAATTGAAGCATTTGTTCTTTATTTATTATACAAATTAATTATTGTCAA TTGATGGTATCAACTATCAAGTTTGATAGTGCATTAGTGCCTGAAATCCAAAAGTTAATACCTGAGAATTACTAGTATAG AATTATTCTACATAGTGGCTAACTTGTACTTATAAAAGTATATGATGTTGGAATTAATAGATGCACATCTGTTAATGTAT ATTTGAGGGTTCATTTTATCTGATTATTCTAATGATGGAAGAGCAGCTGACCGTTTCTTAGTTACTGACGTGCTGTGTGA TTTTCAAAATTGAAGCATTTAGATGGTTGACATACTGTAAGTATGCTATTGGCATTTGGAAACTTCATTGCAAAAGATGG AATTAATATCCACTTGTTCATTTTTCTGACAAAAAACAGGTACTTAATGGGTTGAATATTGAATGAAGGGCTTTCAATAT AATTATATAAGTCAATGTCAAGAATGTTTGGAAATCATTTTATTTTATGATTGATTCTAAATTCAAAATCAATTTTGGGA TTAGTTTATGTGAGTAGCTTTTGACTAGCAGCATTAATTGTGAGAGAAAAATAAATTGATTCGAACATGCTTTTGTGATC AACTTTTAATTCCCCTGCTGAAATCCCATGGAATTTCCTGAATAGGTACAAGAGGCAAACTGGGATCTGTACAAGAAGCA AAAAGCAGCTGAAGCAATTCTCTTTCAGAAGGAGAAAGAGGCAGAAGCACAGAAAGCATTAGCAGAAGCAGCATTTTATA GTCGCCAGCAAGCAGCAGAAGCAGAGCTAGTCTCAAAGAAAAAAGAGGCAGAGGGTCTTATAGCACTTGGTCAAGCACAA GGAGCATATTTGAAGTCACTTATGGGTGCACTTGGCAACAACTATGCACAGCTAAGGGACTACTTGATGATTAATGGTGG CATGTATCAAGAGCTTGCAAAGATCAATGCTGATGGAATTCGTGGGCTTCAACCTAAGATTAGTATTTGGAATAATGGTA ATGGTGGTGCTGAAGGAACTGATGGAAGTGGTGCCAATGGTATGAAAGATGTTGCTAGTATCTACAAGATGTTGCCACCT CTGTTCAACACAGTTCATGAGCAAACTGGTATGCTGCCACCAGCTTGGATGGGAACCATCCCTGACAAAACTTCTGAGTC TCTTAAGTCTTAAGTCTTAATTATACTACCAAATCGCATAATATATGAATGTGATTATCAAGTACTCGTCTTTTTATTTG GTTTGTTGGATTTCATAAAGTAAATACACTTTCAAGTACCTTATATATAAAGTACCTTTTAATGTTTTCAATTACCAATT CAACCAAACAACTGGCAGGTGATTGAATGACCGGGTTTTCCCCCCTCTCTCTGTTCTTTTGGACTATCAAGGAGTGTATA GACACACACAATGTGTTACTGAGAATATAAGAAAGGGAAGTAATTTTTTTTGAAAGAGAAAGGGAAGTAATTTGGATGCA ATCTGATAAAAAGAATGAGTGATAGATATAAAAATTAAGTGTTTTGAGGAGTGTATATATATACTATTGAAGTATTAAGG ATCTATCTATCATAATCGTTTAAAATATTTATAACATTATTTTAATTTGTCCACTTGAGAGTGTAATGGTAAGCTACGTT AACCCTTCATTAAAATTCCATTCACACCCCTTTTACTTTTATTTCAATTCTCTTTGTCCTGTTCAAAAAAAATTCTCTTT GACATCACATATTATATTTTTTTGTTTCTTTCTAACTCTAGATGTAGGTGGATCACATAGGTGAAT
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0381100.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTTTTGTAAGCTCTTGTTATCAAAAACATATTCATTGGTTCATCTCATTATAACTTCTTGCTTTTACAATCACATTGA TCTCACAGTCACACATCACTCTTTTAGAAAAGAAAGAAAAGAAGGAGCAATCATGTGGAAGGTTGCAAACGCATCGGAAT GCCTGGTTATCACTGGAATCGGAATCGACGACATCAAGTTGGCCAAGAAAGCATTCATCTGCCCCGGCCAATCATGCACT GTCGTTGACCTCTCTCCGGTGAACTACACGTTTGAGGTCCAAGCCATGAGCGCCGAGAAGCTCCCATTCGTCCTTCCTGC CGTCTTCACCATCGGCCCTCGTGTCGATGAGAACGAGAGCCTCCTCAAGTATGCCAAGCTCATCTCCAAACATGACAAGC TCTCTAACCACGTGAAAGAGCTTGTCCAGGGGATCATCGAGGGCGAGACGCGTGTTCTCGCAGCCTCGATGACCATGGAA GAGGTTTTCAAAGGCACAAAAGAATTCAAGCATGAAGTGTTCGGGAAGGTGCAGCTCGAGCTTAACCAATTCGGCCTCCT CATCTACAACGCCAATGTCAAGCAGCTCGTTGATGTTCCTGGCCATGAGTATTTCTCTTACTTGGGGCAGAAGACTCAGA TGGAGGCTGCAAATCAAGCCAAGGTGGATGTGGCTGAGGCAAGGATGAAAGGGGAGGTTGGGGCGAAGTTGAGGGATGGG AAAACGCTTCAGAACGCAGCGCAGATTGACGCAGAGACGAAGATCATAGCCACGCAGAGGCAAGGGGATGCGAAGAAGGA GGAGATAAAGGTGAGGACGGAGGTGAAGGTGTTTGAGAATCAAAAGGAGGCTGATGTTGCAGAGGCTAACTCTGAGCTTG CTAAGAAGAAGGCTGTGTGGGCTCAGGCAGCGCAGGTGGCGGAGGTGGAGGCCGCAAAGGCGGTGGCGCTCAGGGAGGCG GAGTTGCAAGGGGAGGTGGAGAGGATGAATGCTCTGACCATGACTGAGAAACTTAAGGCTGAGTTCCTCACCAAGGCAAG CGTGGAGTATGAAACCAAGGTACAAGAGGCAAACTGGGATCTGTACAAGAAGCAAAAAGCAGCTGAAGCAATTCTCTTTC AGAAGGAGAAAGAGGCAGAAGCACAGAAAGCATTAGCAGAAGCAGCATTTTATAGTCGCCAGCAAGCAGCAGAAGCAGAG CTAGTCTCAAAGAAAAAAGAGGCAGAGGGTCTTATAGCACTTGGTCAAGCACAAGGAGCATATTTGAAGTCACTTATGGG TGCACTTGGCAACAACTATGCACAGCTAAGGGACTACTTGATGATTAATGGTGGCATGTATCAAGAGCTTGCAAAGATCA ATGCTGATGGAATTCGTGGGCTTCAACCTAAGATTAGTATTTGGAATAATGGTAATGGTGGTGCTGAAGGAACTGATGGA AGTGGTGCCAATGGTATGAAAGATGTTGCTAGTATCTACAAGATGTTGCCACCTCTGTTCAACACAGTTCATGAGCAAAC TGGTATGCTGCCACCAGCTTGGATGGGAACCATCCCTGACAAAACTTCTGAGTCTCTTAAGTCTTAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0381100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MFCKLLLSKTYSLVHLIITSCFYNHIDLTVTHHSFRKERKEGAIMWKVANASECLVITGIGIDDIKLAKKAFICPGQSCT VVDLSPVNYTFEVQAMSAEKLPFVLPAVFTIGPRVDENESLLKYAKLISKHDKLSNHVKELVQGIIEGETRVLAASMTME EVFKGTKEFKHEVFGKVQLELNQFGLLIYNANVKQLVDVPGHEYFSYLGQKTQMEAANQAKVDVAEARMKGEVGAKLRDG KTLQNAAQIDAETKIIATQRQGDAKKEEIKVRTEVKVFENQKEADVAEANSELAKKKAVWAQAAQVAEVEAAKAVALREA ELQGEVERMNALTMTEKLKAEFLTKASVEYETKVQEANWDLYKKQKAAEAILFQKEKEAEAQKALAEAAFYSRQQAAEAE LVSKKKEAEGLIALGQAQGAYLKSLMGALGNNYAQLRDYLMINGGMYQELAKINADGIRGLQPKISIWNNGNGGAEGTDG SGANGMKDVASIYKMLPPLFNTVHEQTGMLPPAWMGTIPDKTSESLKS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
ProSiteProfiles
PS51257
1 21 21 5.0 –
PANTHER
PTHR13806:SF34
37 518 482 9.3E-230 –
PANTHER
PTHR13806
37 518 482 9.3E-230
IPR027705
Pfam
PF01145
72 227 156 4.5E-16
IPR001107
CDD
cd03399
73 219 147 2.74325E-33 –
SUPERFAMILY
SSF117892
76 216 141 1.16E-17
IPR036013
Gene3D
G3DSA:3.30.479.30
82 199 118 2.4E-17 –
Coils
Coil
374 394 21 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0381100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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