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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001107
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We have found 54 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 6.296s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0108469.1
n.a. PREDICTED: prohibitin-1, mitochondrial-like [Cicer arietinum] gi|502144106|ref|XP_004505579.1| chr0 46889922 46892412 +
4 domain predictions
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Lj0g3v0315989.1
n.a. Flotillin-like protein [Medicago truncatula] gi|357440565|ref|XP_003590560.1| chr0 164982402 164984179 +
3 domain predictions
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Lj0g3v0319529.1
n.a. PREDICTED: prohibitin-3, mitochondrial-like isoform X1 [Cicer arietinum] gi|502158387|ref|XP_004511131.1| chr0 166813122 166816435 +
4 domain predictions
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Lj1g3v0452270.1
n.a. SPFH/Band 7/PHB domain-containing membrane-associated protein family isoform 1 [Theobroma cacao] gi|508711477|gb|EOY03374.1| chr1 6101037 6103046 +
4 domain predictions
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Lj1g3v0453370.1
n.a. SPFH/Band 7/PHB domain-containing membrane-associated protein family isoform 1 [Theobroma cacao] gi|508711477|gb|EOY03374.1| chr1 6116923 6119338 -
4 domain predictions
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Lj1g3v1091500.1
n.a. PREDICTED: stomatin-like protein 2, mitochondrial-like [Cicer arietinum] gi|502136677|ref|XP_004502783.1| chr1 13814128 13820611 +
4 domain predictions
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Lj1g3v1854330.1
n.a. RecName: Full=Flotillin-like protein 1gi|282597660|gb|ADA83094.1| flotillin-like protein 1 [Medicago truncatula] gi|300680951|sp|D2XNQ8.1|FLOT1_MEDTR chr1 22437169 22439382 -
2 domain predictions
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Lj2g3v0489000.1
n.a. PREDICTED: hypersensitive-induced response protein 4-like [Cicer arietinum] gi|502171032|ref|XP_004514970.1| chr2 6821736 6823979 +
3 domain predictions
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Lj2g3v1034530.1
n.a. hypersensitive induced reaction protein 1 [Glycine max] gi|354683205|gb|AER30501.1| chr2 16519628 16522616 +
4 domain predictions
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Lj2g3v1338920.1
n.a. hypersensitive-induced response protein [Lotus japonicus] gi|57834178|dbj|BAD86819.1| chr2 21053830 21055413 -
4 domain predictions
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Lj2g3v1338930.1
n.a. hypersensitive-induced response protein [Lotus japonicus] gi|57834178|dbj|BAD86819.1| chr2 21056468 21059254 -
4 domain predictions
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Lj3g3v2825330.1
n.a. PREDICTED: prohibitin-2, mitochondrial-like isoform 1 [Solanum lycopersicum] gi|460405433|ref|XP_004248180.1| chr3 34769187 34772491 -
4 domain predictions
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Lj3g3v3261500.1
n.a. PREDICTED: erlin-2-B-like [Glycine max] gi|356519804|ref|XP_003528559.1| chr3 40192789 40196861 -
3 domain predictions
 –
Lj3g3v3430160.2
n.a. Prohibitin [Medicago truncatula] gi|357455809|ref|XP_003598185.1| chr3 42067518 42069691 -
3 domain predictions
 –
Lj3g3v3639370.1
n.a. PREDICTED: prohibitin-1, mitochondrial-like [Cicer arietinum] gi|502144106|ref|XP_004505579.1| chr3 44082356 44084863 +
4 domain predictions
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Lj4g3v0669760.1
n.a. Erlin-2 [Medicago truncatula] gi|357475039|ref|XP_003607805.1| chr4 11207562 11211727 -
4 domain predictions
 –
Lj4g3v1614730.1
n.a. SPFH/Band 7/PHB domain-containing membrane-associated protein family isoform 1 [Theobroma cacao] gi|508774465|gb|EOY21721.1| chr4 23764521 23767014 +
4 domain predictions
 –
LotjaGi1g1v0215100.1
n.a. Hypersensitive-induced response protein 1; TAIR: AT5G62740.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family; Swiss-Prot: sp|Q9FM19|HIR1_ARATH Hypersensitive-induced response protein 1; TrEMBL-Plants: tr|I3SUN5|I3SUN5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0215100 LjG1.1_chr1 47451868 47458342 +
3 domain predictions
 –
LotjaGi1g1v0215100.2
n.a. Hypersensitive-induced response protein 1; TAIR: AT5G62740.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family; Swiss-Prot: sp|Q9FM19|HIR1_ARATH Hypersensitive-induced response protein 1; TrEMBL-Plants: tr|I3SUN5|I3SUN5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0215100 LjG1.1_chr1 47451897 47454512 +
3 domain predictions
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LotjaGi1g1v0215100.3
n.a. Hypersensitive-induced response protein 1; TAIR: AT5G62740.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family; Swiss-Prot: sp|Q9FM19|HIR1_ARATH Hypersensitive-induced response protein 1; TrEMBL-Plants: tr|I3SUN5|I3SUN5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0215100 LjG1.1_chr1 47452425 47454319 +
3 domain predictions
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LotjaGi1g1v0215100.4
n.a. Hypersensitive-induced response protein 1; TAIR: AT5G62740.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family; Swiss-Prot: sp|Q9FM19|HIR1_ARATH Hypersensitive-induced response protein 1; TrEMBL-Plants: tr|I3SUN5|I3SUN5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0215100 LjG1.1_chr1 47452425 47454370 +
3 domain predictions
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LotjaGi1g1v0301700.1
n.a. SPFH domain/band 7 family protein; TAIR: AT4G27585.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family; Swiss-Prot: sp|O60121|YH77_SCHPO Uncharacterized protein C16G5.07c; TrEMBL-Plants: tr|V7AVV9|V7AVV9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0301700 LjG1.1_chr1 73555266 73562154 +
3 domain predictions
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LotjaGi1g1v0380900.1
n.a. Flotillin-1, putative; TAIR: AT5G25250.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family; Swiss-Prot: sp|D2XNQ8|FLOT1_MEDTR Flotillin-like protein 1; TrEMBL-Plants: tr|B9IL19|B9IL19_POPTR Nodulin family protein; Found in the gene: LotjaGi1g1v0380900 LjG1.1_chr1 86319540 86322478 -
2 domain predictions
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LotjaGi1g1v0381000.1
n.a. Flotillin-like protein 1; TAIR: AT5G25250.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family; Swiss-Prot: sp|D2XNQ8|FLOT1_MEDTR Flotillin-like protein 1; TrEMBL-Plants: tr|V7AXM0|V7AXM0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0381000 LjG1.1_chr1 86332422 86335657 -
2 domain predictions
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LotjaGi1g1v0381100.1
n.a. Flotillin-like protein 1; TAIR: AT5G25260.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family; Swiss-Prot: sp|D2XNQ8|FLOT1_MEDTR Flotillin-like protein 1; TrEMBL-Plants: tr|A0A0R0JJ08|A0A0R0JJ08_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0381100 LjG1.1_chr1 86337395 86342260 -
2 domain predictions
 –
LotjaGi1g1v0381100.2
n.a. Flotillin-like protein 1; TAIR: AT5G25260.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family; Swiss-Prot: sp|D2XNQ8|FLOT1_MEDTR Flotillin-like protein 1; TrEMBL-Plants: tr|Q9ZTB2|Q9ZTB2_SOYBN Nodulin; Found in the gene: LotjaGi1g1v0381100 LjG1.1_chr1 86337846 86372512 -
2 domain predictions
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LotjaGi1g1v0381100.3
n.a. Flotillin-like protein 1; TAIR: AT5G25260.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family; Swiss-Prot: sp|D2XNQ8|FLOT1_MEDTR Flotillin-like protein 1; TrEMBL-Plants: tr|A0A0R0JJ08|A0A0R0JJ08_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0381100 LjG1.1_chr1 86369786 86372706 -
2 domain predictions
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LotjaGi2g1v0161900.1
n.a. Hypersensitive-induced response protein; TAIR: AT5G51570.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family; Swiss-Prot: sp|Q9FHM7|HIR4_ARATH Hypersensitive-induced response protein 4; TrEMBL-Plants: tr|I1L3L1|I1L3L1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0161900 LjG1.1_chr2 56740254 56744062 -
3 domain predictions
 –
LotjaGi2g1v0256400.1
n.a. Hypersensitive-induced response protein 1; TAIR: AT5G62740.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family; Swiss-Prot: sp|Q9FM19|HIR1_ARATH Hypersensitive-induced response protein 1; TrEMBL-Plants: tr|I3SYV8|I3SYV8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0256400 LjG1.1_chr2 72275316 72281681 +
3 domain predictions
 –
LotjaGi2g1v0256400.2
n.a. Hypersensitive-induced response protein 1; TAIR: AT5G62740.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family; Swiss-Prot: sp|Q9FM19|HIR1_ARATH Hypersensitive-induced response protein 1; TrEMBL-Plants: tr|I3SYV8|I3SYV8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0256400 LjG1.1_chr2 72275316 72283384 +
3 domain predictions
 –
LotjaGi2g1v0256400.3
n.a. Hypersensitive-induced response protein 1; TAIR: AT5G62740.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family; Swiss-Prot: sp|Q9FM19|HIR1_ARATH Hypersensitive-induced response protein 1; TrEMBL-Plants: tr|I3SYV8|I3SYV8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0256400 LjG1.1_chr2 72276241 72278278 +
3 domain predictions
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LotjaGi2g1v0308300.1
n.a. Hypersensitive-induced response protein 1; TAIR: AT1G69840.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family; Swiss-Prot: sp|Q9CAR7|HIR2_ARATH Hypersensitive-induced response protein 2; TrEMBL-Plants: tr|Q5KSB6|Q5KSB6_LOTJA Hypersensitive-induced response protein; Found in the gene: LotjaGi2g1v0308300 LjG1.1_chr2 78258768 78260838 -
3 domain predictions
 –
LotjaGi2g1v0308400.1
n.a. Hypersensitive-induced response protein 1; TAIR: AT5G62740.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family; Swiss-Prot: sp|Q9FM19|HIR1_ARATH Hypersensitive-induced response protein 1; TrEMBL-Plants: tr|Q5KSB6|Q5KSB6_LOTJA Hypersensitive-induced response protein; Found in the gene: LotjaGi2g1v0308400 LjG1.1_chr2 78261138 78264605 -
3 domain predictions
 –
LotjaGi2g1v0308400.2
n.a. Hypersensitive-induced response protein 1; TAIR: AT5G62740.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family; Swiss-Prot: sp|Q9FM19|HIR1_ARATH Hypersensitive-induced response protein 1; TrEMBL-Plants: tr|Q5KSB6|Q5KSB6_LOTJA Hypersensitive-induced response protein; Found in the gene: LotjaGi2g1v0308400 LjG1.1_chr2 78262019 78264337 -
3 domain predictions
 –
LotjaGi2g1v0308400.3
n.a. Hypersensitive-induced response protein 1; TAIR: AT5G62740.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family; Swiss-Prot: sp|Q9FM19|HIR1_ARATH Hypersensitive-induced response protein 1; TrEMBL-Plants: tr|Q5KSB6|Q5KSB6_LOTJA Hypersensitive-induced response protein; Found in the gene: LotjaGi2g1v0308400 LjG1.1_chr2 78262019 78264446 -
3 domain predictions
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LotjaGi3g1v0099400.1
n.a. Prohibitin, putative; TAIR: AT5G40770.1 prohibitin 3; Swiss-Prot: sp|O04331|PHB3_ARATH Prohibitin-3, mitochondrial; TrEMBL-Plants: tr|A0A1J7HVR6|A0A1J7HVR6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0099400 LjG1.1_chr3 12362521 12364383 +
3 domain predictions
 –
LotjaGi3g1v0099400.2
n.a. Prohibitin, putative; TAIR: AT5G40770.1 prohibitin 3; Swiss-Prot: sp|O04331|PHB3_ARATH Prohibitin-3, mitochondrial; TrEMBL-Plants: tr|A0A1J7HVR6|A0A1J7HVR6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0099400 LjG1.1_chr3 12362521 12367639 +
3 domain predictions
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LotjaGi3g1v0448200.1
n.a. Prohibitin, putative; TAIR: AT1G03860.1 prohibitin 2; Swiss-Prot: sp|Q9ZNT7|PHB2_ARATH Prohibitin-2, mitochondrial; TrEMBL-Plants: tr|A0A151SEX0|A0A151SEX0_CAJCA Prohibitin-2; Found in the gene: LotjaGi3g1v0448200 LjG1.1_chr3 86151692 86154552 -
3 domain predictions
 –
LotjaGi3g1v0448200.2
n.a. Prohibitin, putative; TAIR: AT1G03860.1 prohibitin 2; Swiss-Prot: sp|Q9ZNT7|PHB2_ARATH Prohibitin-2, mitochondrial; TrEMBL-Plants: tr|A0A151SEX0|A0A151SEX0_CAJCA Prohibitin-2; Found in the gene: LotjaGi3g1v0448200 LjG1.1_chr3 86151692 86154775 -
3 domain predictions
 –
LotjaGi3g1v0540700.1
n.a. Prohibitin, putative; TAIR: AT2G20530.1 prohibitin 6; Swiss-Prot: sp|Q9SIL6|PHB6_ARATH Prohibitin-6, mitochondrial; TrEMBL-Plants: tr|I3SJG9|I3SJG9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0540700 LjG1.1_chr3 95794772 95797517 +
3 domain predictions
 –
LotjaGi3g1v0540700.2
n.a. Prohibitin, putative; TAIR: AT2G20530.1 prohibitin 6; Swiss-Prot: sp|Q9SIL6|PHB6_ARATH Prohibitin-6, mitochondrial; TrEMBL-Plants: tr|I3SJG9|I3SJG9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0540700 LjG1.1_chr3 95794950 95796999 +
3 domain predictions
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LotjaGi3g1v0540700.3
n.a. Prohibitin, putative; TAIR: AT2G20530.1 prohibitin 6; Swiss-Prot: sp|Q9SIL6|PHB6_ARATH Prohibitin-6, mitochondrial; TrEMBL-Plants: tr|I3SJG9|I3SJG9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0540700 LjG1.1_chr3 95795160 95796999 +
3 domain predictions
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LotjaGi3g1v0540700.4
n.a. Prohibitin, putative; TAIR: AT4G28510.1 prohibitin 1; Swiss-Prot: sp|O49460|PHB1_ARATH Prohibitin-1, mitochondrial; TrEMBL-Plants: tr|I3SJG9|I3SJG9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0540700 LjG1.1_chr3 95795166 95796999 +
3 domain predictions
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LotjaGi4g1v0087500.1
n.a. Erlin-2; TAIR: AT2G03510.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family; Swiss-Prot: sp|Q6DKC0|ERL2B_XENLA Erlin-2-B; TrEMBL-Plants: tr|A0A0L9TMR4|A0A0L9TMR4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0087500 LjG1.1_chr4 11628371 11632814 -
3 domain predictions
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LotjaGi4g1v0246500.1
n.a. Hypersensitive-induced response protein 1; TAIR: AT5G62740.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family; Swiss-Prot: sp|Q9FM19|HIR1_ARATH Hypersensitive-induced response protein 1; TrEMBL-Plants: tr|A0A0D2LVS1|A0A0D2LVS1_GOSRA Uncharacterized protein; Found in the gene: LotjaGi4g1v0246500 LjG1.1_chr4 59807392 59808897 +
3 domain predictions
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LotjaGi4g1v0246500.2
n.a. Hypersensitive-induced response protein 1; TAIR: AT5G62740.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family; Swiss-Prot: sp|Q9FM19|HIR1_ARATH Hypersensitive-induced response protein 1; TrEMBL-Plants: tr|A0A0D2LVS1|A0A0D2LVS1_GOSRA Uncharacterized protein; Found in the gene: LotjaGi4g1v0246500 LjG1.1_chr4 59807393 59809848 +
3 domain predictions
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LotjaGi4g1v0246500.4
n.a. Hypersensitive-induced response protein 1; TAIR: AT5G62740.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family; Swiss-Prot: sp|Q9FM19|HIR1_ARATH Hypersensitive-induced response protein 1; TrEMBL-Plants: tr|W9S324|W9S324_9ROSA Hypersensitive-induced response protein 1; Found in the gene: LotjaGi4g1v0246500 LjG1.1_chr4 59807405 59809072 +
3 domain predictions
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LotjaGi4g1v0246500.5
n.a. Hypersensitive-induced response protein 1; TAIR: AT5G62740.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family; Swiss-Prot: sp|Q9FM19|HIR1_ARATH Hypersensitive-induced response protein 1; TrEMBL-Plants: tr|A0A0D2LVS1|A0A0D2LVS1_GOSRA Uncharacterized protein; Found in the gene: LotjaGi4g1v0246500 LjG1.1_chr4 59807405 59809146 +
3 domain predictions
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LotjaGi5g1v0118800.1
n.a. Prohibitin, putative; TAIR: AT5G40770.1 prohibitin 3; Swiss-Prot: sp|O04331|PHB3_ARATH Prohibitin-3, mitochondrial; TrEMBL-Plants: tr|G7L8K5|G7L8K5_MEDTR Prohibitin complex protein; Found in the gene: LotjaGi5g1v0118800 LjG1.1_chr5 24880057 24884359 -
3 domain predictions
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LotjaGi5g1v0118800.2
n.a. Prohibitin, putative; TAIR: AT5G40770.1 prohibitin 3; Swiss-Prot: sp|O04331|PHB3_ARATH Prohibitin-3, mitochondrial; TrEMBL-Plants: tr|G7L8K5|G7L8K5_MEDTR Prohibitin complex protein; Found in the gene: LotjaGi5g1v0118800 LjG1.1_chr5 24883366 24884205 -
3 domain predictions
 –