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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0398400 |
| Transcript ID | LotjaGi1g1v0398400.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase; TAIR: AT4G24740.2 LAMMER-type protein kinase AFC2; Swiss-Prot: sp|P51567|AFC2_ARATH Serine/threonine-protein kinase AFC2; TrEMBL-Plants: tr|G7J2X1|G7J2X1_MEDTR Kinase AFC1; Found in the gene: LotjaGi1g1v0398400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:88490389..88494335) extracted from Lotus japonicus Gifu genome v1.2.
TTCGCGTTCTTACCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCAATCGCGTTCTTCAACCTTCCCCAGCTTCCATTT CAGAGGTTCAATCCAACCCAATTAACCTTCTTTTAAGCTTTCCCTCGCAGATGCATAGCCAGTAACTGCATGGTACCTGT TGAAGCCAATCACATGGAGCGGGAACGAATTCGTAAACGACCTCGTCTCACCTGGGATGTTCCCCCTCCAGAGGTTTCTT CAATTTCTCAATTCTCGTTAGGGTTTTCAATTTTCAATTCTCAATAATCTGAAATTGCTTTGCTTTGTTAATCTTAGTCG CAGAGGGCTTTGGTGTTAGATGGTGACGAACGAATCGATAAGAAGCATGCCTCGCCTCCACGAAGGGATGATGACCGCGA TGGCCATTATGTGTATCATCTCGGCGAAAATCTCACTCCTAGATGTAACTTCTCTCCCAATTTCTTTGCTTATTTGTTGT TTTCTTTCAATTCGTTTCAAAAATCAACCAATTTAGATGCGATACCCATTGCTTTGTTTTGTCAAATTTTAATTGTAGCC TTGTGAATTGCTCTGTTTTTTGTTCTGGGTGTTTCATTTACCTAATAAGTTCATTTCTTTTAATTGTTTGTACCCTTGTT CAGTTTTTAATTAGTTCTTATATTTCAGCATTTGGTAACACATGATGTGAATCATCCTAATTTCATAGGTTTTTTTATTT TTTATTTTAATGCCATGGTGCTTAATGTGTGCTATTATCCTGATTCCTGATACCACTCATTCAGATAGTGATTTTTATGT TTTCTCATTGGAGTGGTTTTTCGTTTTGTTTTGTTTTTAACAGATAAAATTCTCAGCAAGATGGGTGAAGGTTAGGGGTC AAGTGCTATCTGAATACAAGTTTAATTTTTTTGTGAGTGTGCTTCTGTCATTCCACATGTTGCTAGTGCTGTAGGCACAT TTGGTCGGGTTTTGGAATGTTGGGACCGTCAAACACGAGAGTATGTAGCTATCAAGGTAATTAGGAGCATACGGAAATAT CGCGATGCGGCAATGCTTGAGATTGATGTGCTTGAACGTCTAACAAAGAAGGATGGAGCAAGCTCACGGTACGGATTGTG TATACTGTATAGTAAAATTGCTGCTAGAATTTGGTTATCGTTTATTGCATGGGATGACTAATATTTACTCCATCACAATT GTTATTTGCAGCTGTGTGCAGATCATAAATTGGTTTGATTACCGAAATCACATATGCATTGTAAGTAGTCTATATAATAT TTCTTTCGTCAATATATCTTCCTTGATTTACTGTGTTCAAGAAGTTTGTTTTGATAAAAATTGTTGCCGAATTGAAAGTG TGCTGTCTTCCTTTTTTCTGGGGGTGGGAAGGGTTACAGGTTATTTTTTAGTTGTTGTGAAAATGGATGGGATGATTGGA ATCTTGAATGAATTTGGTAATTATTTTCCTGATGGTTTGTGTATGTCTTTCATGTTCTTTTGTTCTCCTTTCTTTTCAGA AAGGATAGGTGATTGATCACCATTTATTTTGCAAGTGAATTGAGTTGTTTAGTTCAGCCATAGTGAATTACACACACACA CATCTCCATGGGGGCTTTATTCATAGAATTGGGAACTAAGCAGATATATTCCTTCAATGCATTTTAATGGTGTTATCAGG TCTTTGAGAAGCTTGGACCAAGCTTATTTGATTTTCTAAGGAGAAATAAATACTGCCCATTCCCTGTGGATCTTGTTCGT GAATTTGGACGACAGCTTTTGGAATCTGTAGCATGTCTGTGGATAATTCTAGACCTTCAGTTTACTTCTCATGTTTTATT CTTATATCTCTTGTGTACAATCAACCACATCATTTTCCTTGGCTGTCTTGCTTTGTCCAGGAACGCAGTATTTCTTCGTT TTGTCTGCTTACTTAAACTTGTTTCTTGTGCTTTGTCATATTCAGATATGCATGAACTACACCTAATCCACACAGACCTG AAGCCAGAAAATATACTTCTTGTTTCTTCTGAATATGTAAAGCTCCCTAGTCGCAAGGTAGCTAGCATTTTTGAAGTAAT GACATAGACTCTAATGATGTATTTAAGTAAAATGATTTGATTGGTACAGAGGCTTTCCTCAGATGAAACACAATTCAGGT GCTTGCCCAAATCTAGTGCTATTAAGCTGATTGATTTTGGTAGTACTGCATGTGATAATCAGAACCATAGCTCCATTGTT TCTACAAGGCATTACAGAGCCCCGGAGATTATTTTAGGTAACTAGATATTGTTTTTGTTGGTGAGAATGTGTTGCTTTAC TTGTTTGTCTATTGCTCTGTTGAGTGTAAATGTGGAACTCTGAAACCCTGTGACCCATTAAAAATTTCGTCAATACCTTA CATCACATCTCTTGTTAAATCTTCCAGGATTATTTACCATCTTCTTTTGACTTTGTATGATCCTGGATTTTATGTTCAAG ATATTGGTTGTTGTGACTTCTGAGCCCTTTGTAGGGTAGTAATTGCCATTTTTCTTATTCAGATTGTATTCCCCCCTTAT AATGCATGCCTTGCTAGTAATCTTCCTGTACACTTTCTTTGGTGATCTTTTGTTTGTTTTCTCATGTTAATGTTAAGAGG CCAAAAACAAACCAGAGGTGCCAAATCTATGACATGTAATGGTGCCATTTGGGAGACTGCATTATGTGGATTTAGTGCAT GTTTGGATGCACGGTGAAAAAAAAAATCATGGTGGACAGAAGTAAAAGATAAGGGAAGTTGCTTCTATCCACCATGATTT TGGCTCACCGTGGTTTTGTACCATGTATACAAACATGCACTTAGTCTTGACTAAATGAAATTATTAGGATTGTAATAGTT AATGCAATGCTCTCACCTGTATCTGAAATGATAATTGCAGGTCTAGGGTGGTCATACCCATGTGATTTGTGGAGTATTGG ATGTATCCTCATTGAACTATGCACGGTTGGTCCTCCAGCTAACAAGATACATTAGGCATGGTCAGAATCTGGAACAGCTA GCCTTAATGTTTTAAATGTGGAACTTTTGCAGGGTGAAGCGTTGTTCCAGACTCATGAAAACTTAGAGCATCTGGCAATG ATGGAGAGAGTCCTGGGACCTCTACCAGAGCACATGGTTCGAAGATCTAAGTAAGTAATAGATTTATTGAATGCTCTCTA AATTTGTCTTTCCAATACACAAAATTGGTTTGAGATCTATAGTGAGTCTTCCTAGTTATGAATCATCTACTGGGAATAGC CAAGAGCTGACTAATTTTAATTGAGCATACGATATTTATGTAGTGACATATTTTCCACTTGCTTGACATTATGTAGTAGG GGTGCAGAAAAGTATTTCAAGCGTGGATCCCGACTAAAATGGCCTGAAGGAGCTGTTTCAAGGGAGAGCATAAATGCTGT GAAGAGGCTTGGCCATCTTAAGGTTTGTTGAGTTCCCTCTTATCAATCAGGAGTTGCTGGGTAGAATCTTCAATCAATCA ATGTTTTCTTTGGGGTTTTTAAATTATAGTGACCAATTGTTCTTCATGCAGGATATTGTATCACGTCATGTAGATTCGTC CAGGTTTTTGTTAACTGACTTGTTGCATGGCTTATTAACATATGATCCCACAGAACGTCTAACTGCTCGCCAAGCCCTTG ATCATCCCTTCTTTAGGGATCCAACTTAAGAAGCCAAATGCCTCTTTTGTTTTTGATTTACTTCCATTTCGAAGTTTGCC AGTTGCTCAGGCTGCAAGATAATGTTTGATGTATCATGTATTATTATTGATTCATAGCAGAGGTCAAGTCGCGTTGATAA TATATTTGATCATTCCTTATGTTCTCATTTTATTGATCATTTTGGAACTCAAGAATTGAACTTCGTCTTATGTTTTTCTA GCCAACCGCATTTGGCTTGCATTATAG
CDS sequence (LotjaGi1g1v0398400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTGAGATTGATGTGCTTGAACGTCTAACAAAGAAGGATGGAGCAAGCTCACGCTGTGTGCAGATCATAAATTGGTT TGATTACCGAAATCACATATGCATTGTCTTTGAGAAGCTTGGACCAAGCTTATTTGATTTTCTAAGGAGAAATAAATACT GCCCATTCCCTGTGGATCTTGTTCGTGAATTTGGACGACAGCTTTTGGAATCTGTAGCATGTCTGTGGATAATTCTAGAC CTTCAGTTTACTTCTCATGTTTTATTCTTATATCTCTTGTGTACAATCAACCACATCATTTTCCTTGGCTGTCTTGCTTT GTCCAGGAACGCAGTATTTCTTCGTTTTGTCTGCTTACTTAAACTTGTTTCTTGTGCTTTGTCATATTCAGATATGCATG AACTACACCTAATCCACACAGACCTGAAGCCAGAAAATATACTTCTTGTTTCTTCTGAATATGTAAAGCTCCCTAGTCGC AAGAGGCTTTCCTCAGATGAAACACAATTCAGGTGCTTGCCCAAATCTAGTGCTATTAAGCTGATTGATTTTGGTAGTAC TGCATGTGATAATCAGAACCATAGCTCCATTGTTTCTACAAGGCATTACAGAGCCCCGGAGATTATTTTAGGTCTAGGGT GGTCATACCCATGTGATTTGTGGAGTATTGGATGTATCCTCATTGAACTATGCACGGGTGAAGCGTTGTTCCAGACTCAT GAAAACTTAGAGCATCTGGCAATGATGGAGAGAGTCCTGGGACCTCTACCAGAGCACATGGTTCGAAGATCTAATAGGGG TGCAGAAAAGTATTTCAAGCGTGGATCCCGACTAAAATGGCCTGAAGGAGCTGTTTCAAGGGAGAGCATAAATGCTGTGA AGAGGCTTGGCCATCTTAAGGATATTGTATCACGTCATGTAGATTCGTCCAGGTTTTTGTTAACTGACTTGTTGCATGGC TTATTAACATATGATCCCACAGAACGTCTAACTGCTCGCCAAGCCCTTGATCATCCCTTCTTTAGGGATCCAACTTAA
Protein sequence (LotjaGi1g1v0398400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLEIDVLERLTKKDGASSRCVQIINWFDYRNHICIVFEKLGPSLFDFLRRNKYCPFPVDLVREFGRQLLESVACLWIILD LQFTSHVLFLYLLCTINHIIFLGCLALSRNAVFLRFVCLLKLVSCALSYSDMHELHLIHTDLKPENILLVSSEYVKLPSR KRLSSDETQFRCLPKSSAIKLIDFGSTACDNQNHSSIVSTRHYRAPEIILGLGWSYPCDLWSIGCILIELCTGEALFQTH ENLEHLAMMERVLGPLPEHMVRRSNRGAEKYFKRGSRLKWPEGAVSRESINAVKRLGHLKDIVSRHVDSSRFLLTDLLHG LLTYDPTERLTARQALDHPFFRDPT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 75 | 75 | 2.9E-148 | – | |
| ProSiteProfiles | 1 | 341 | 341 | 26.421 | ||
| Phobius | 1 | 87 | 87 | - | – | |
| PANTHER | 1 | 75 | 75 | 2.9E-148 | – | |
| Gene3D | 2 | 39 | 38 | 9.4E-17 | – | |
| SUPERFAMILY | 2 | 75 | 74 | 1.68E-10 | ||
| SMART | 4 | 341 | 338 | 9.9E-16 | ||
| Gene3D | 15 | 75 | 61 | 9.4E-17 | – | |
| TMHMM | 87 | 109 | 23 | - | – | |
| Phobius | 88 | 107 | 20 | - | – | |
| Phobius | 108 | 111 | 4 | - | – | |
| Phobius | 112 | 130 | 19 | - | – | |
| Pfam | 123 | 341 | 219 | 6.7E-31 | ||
| PANTHER | 130 | 342 | 213 | 2.9E-148 | – | |
| PANTHER | 130 | 342 | 213 | 2.9E-148 | – | |
| Phobius | 131 | 345 | 215 | - | – | |
| SUPERFAMILY | 131 | 343 | 213 | 8.11E-44 | ||
| Gene3D | 132 | 340 | 209 | 2.6E-63 | – | |
| ProSitePatterns | 137 | 149 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0398400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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