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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0399600 |
| Transcript ID | LotjaGi1g1v0399600.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Signal peptide peptidase-like protein; TAIR: AT2G03120.1 signal peptide peptidase; Swiss-Prot: sp|O81062|SIP_ARATH Signal peptide peptidase; TrEMBL-Plants: tr|I3S2E3|I3S2E3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0399600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:88670078..88676231) extracted from Lotus japonicus Gifu genome v1.2.
GCCACGTCAGCAAAAACTCGTTTTTCCTCTATTCTGATTGGTAGTGACACAACACAAAACAAGTTTTCCCTTAAACGGTT TTTCTTCCTCTCTCGTTTGACTCTCAAACCCGTAAAAAAAAAAAGTAAAACTTCAAAACCCTAACCCTTCAAATCCATTT TCCCCCAAATCAAATCAAATCAAATCCTCTTCAATTTCTCCGATCTGCTGCTACTGCTTCTTCGCGTTCTTCTTCCCTGC CTGCTCCTGCAATTCTCTCTCGCGATTCCAGGTTTCTTCTTCTTTCTTTCCCCAACTCAATCTACGTTTCAATTTTCTCT TTTGCAATTCGTTTTCGCATTGATCGATCATGCGTTTTTAATTTCAATTACTCTTGTTGTTTCTCGATCGCAGTTGGGGC AACGTGTGTGTGATTCCGCCAGATCCATAGTTTTTCAGACTCACATTGGGGAAGAGTTTCAGGAGAAGAATGAAGAACAC CGAGCGACTTGCGAATTTCGCTTTACTAGGTTTGCTTCTCAATACCCTTATTCAGATACTGCGTTTCTCTAGTGTAGTAT TTGAAAAGAAACCCCAATTATAAGTAAAGTTCTGTTCTTTAAAAAAAATCCCCAATTATAAGTATAGTTCTGTGGACTTT GAAACCTACTGTAGGATTTAAATTGAGCATTTGGGCATTCTACTAGACTGCAGTTGCTCATTCTATCATTTCTGCAGATT GAAATTAAGGGCTTGGGGTTTTGATGGGCTTAAACAGAAAATGAACCATATAAGGTTATCGGAATTTGGTTTTGAAATTG TTGTATTATGTTTTGTAGTTTTCGTTAATTTGATCGGTCGTACCTTCTTCAATAATGTTAGTGGATCAGTAGAGGGAAGG TGGGTCATTTTCTTTTCTTTGATCAATCGATGTTAATGGAATTTTGTATGTCATTGCAGGTTTAACCTTGGCACCGCTTG TTGTGAAAGTGGATCCGAATTTAAATGTTATTTTGACTGCCTGCATCACTGTGTTTGTCGGATGTTATCGTTCTGTCAAA CCAACCCCACCAACTGTAAGTTGTAGCTTTGCCCATTCTCTGCTTCACATTGCGCTATTCGTTACTAGAGATCTGATTTT TCTGGACTATGTTGTGAACAATTATGCAGGAGACGATGTCCAATGAGCATGCCATGCGGTTTCCCTTTGTTGGGAGTGCA ATGTTGCTATCACTTTTCTTACTCTTTAAGTTTCTCTCAAAGGACTTGGTGAACACTGTTTTGACAGGCTACTTCTTTGT ACTTGGGATTGTTGCGCTCTCGTATGTTATTTTCTTTGTTTTCATTGTACTTGTTATGTAGTCCATAGAATCATTTTTTA CATATATGCTATTTTATCGCTCATTTTTTCTTCTACTGTCTACAGGGCAACATTATTGCCATCCATTAAACGCTTTCTGC CAAATCATTGGAATGACGACAACATAGTCTGGCGTTTTCCATATTTTCGTTGTATGTGACATTCTGCCTCCTTATTTTTC TTTTGCTTTGATAGATGTTTTTCTCTTCTTCCTTTGAGTTTGTAGTTCAATGATGGCATTCTTTGGCTATTATCAATCAT AACACCGATAGCTGCAACTTGTTCTGTGATGTACCTAATTGAATATCAAAATGTTTGGGAGTTCTTTATTTATTGACAAT GCATATACTGTTTCAACTAGATGTTTCATTCTAAGTTTTAACCCTTTTTTTAGTGAAATTACTTAATATCTAAGAGTAGG TCATGGTGCATGTTTGTATCTATTTTTTAATGCTCCTTGCACATAAAAATTCATTCCCAAATGAATCGTGAACTATTCTT GAAAAGGGATTTTAAAATTACCAAGTAGAACAAAGAATAATGCTTAATGCATTCATTCCTTGTTAAAGTGTGTTGTTTTT GCTACTTTCAGCTGTTTGCACTTGATCTAGTTGACATTAAGTTGCTTCTATCATGCAGAATGATATTTTTCCTTACACCT TTCTTAAACAGCTTTAGAGGTTGAGTTTACAAGATCACAGATAGTTGCTGCAATCCCTGGGACATTTTTTTGTGCTTGGT ATGCTTTGCGGAAGCATTGGTTGGCAAATAATATATTGGGTCTTGCTTTCTGTATTCAGGTTTGGCACTTTACCTGCATT TATGTAATAATATGTACATCTATGTTTGTATATATAAAATTTAATTGATTGGTACACAACCAATCAGAAACAACTGATTT TAAATAAAAATCTGCATACTAACAACCAGTTATAGCTTTTATTCATGCCGATTATAAATAGATTGAAACTGGTCGAATTA TAAATCGATTGAAACTGATAGATAATAGAAAACCTGTATGCCGGCAGTTTTACTTAATAAACTTATATATTTATGGAATT ATGGTATCTAATTGACAATAAAAAATGGACAGCATTATTCAAGGTTCGATAGTGGTAGGTTTGCTTACAGATTTTGAGAG TATAGATACCAATTTACTTGACAAATATCAAATGACAACAATTAGAAAATGTACATATACATGTCCATCAACCATTAATT ATTTTAAGGATACTGAACCAATTATATTTGCATGTCCATCAACCATTTCCTATAATAATTCATTTTTGTCAATTGAACCA GTAAGTCATGCATTTTATACGATTAATGGTGTACATTTACATGTCCATCAACCATTAATTATTTTAAGGATACTGAACCA ATTATATTTGCATGTCCATCAACCATGTCCTATAATAATTCATTTTTATCAGTTGAACCAGTAAGTCATGCATTTTATAC GATTTAAATCAGTAAACAGGATGTGATACCTATTACTTCATCCTTGACATTTACAGGGAATTGAAATGCTTTCTCTTGGG TCTTTCAAGACTGGTGCTATTCTCTTGGTAGGTATTTTTAACTGTAATTAATGGTGCTCAAGGCTTCAATATTTTTAAAA CCATTTAATTGCATGTTTTAAAAGATCTTGTTTTCTATACCAAAAATCCGTTTGCTGCAGATAAACCTGTCCACTCATCT TTGTCTGTTTCTTTTAAGAAATTTTAGAGAATCATGTGGCTTTTGTGGTTGTTATAAAATACAATAAAATGGACTTGAGC TTGATTTACTTGCTCTCTATTGGTTTGTCCATTTACTTTTGAGTTTTGACCATCTCAATCACATGTAAACTCATAAAATG CCTGATTAGATTGCCTTCTATATTTTTTCCCATGTATATAATCAAATCTTACCTTCCAAAAGCATGTGATTTTTCCCATG TATATTATTCTTTGACTTTTAAATTCATGTATTTTGCAGGCTGGTCTTTTTGTCTATGACATTTTCTGGGTTTTCTTCAC TCCTGTGATGGTTAGCGTTGCCAAATCATTCGATGCTCCAATTAAGGTTAAAATCTCGCGAACCAAAATTGAACTTTTTG TTTCAGATGAAAAATGTAACAATTTTTCTGATACATTTTTTTTTCCAGCTATTGTTCCCTACAGCAGATGCTGTGAGGCC ATTTTCAATGCTTGGGCTTGGTGATATTGTTATCCCTGGTAGGATGACTCATTGATGCCGTATTGATTTTTTTTTCCTTT TTGGTGAAATTACCTGTAATAATGTAGTTCTAAGTATATATCTGCGATTGGATTTTTTAACCTGTGTTTGGAAGATTTTG GGAGAAGGGGATAGAATGGAAAAGGGATCAAATGAACGTTAATCATAGGGAAAGAGAGTTTCACATCGCTGTCATGTGAT GAGTTCGCATTTGTGAGGCTAACGATTCCCTCTAATTTGCCGGGCCTGTTGTGAAAAAAGCCTGCTTGGACCAGTCCAGT GGAACTTCCATACTAAAGAAAAATGGAAAGGGAAGGGGTGGGGTGGAGTGGAAAAGAGATATGTTCCCTTGTTTCCCCCT GTTTGGATGATTAAATTAAATGAGGGAAGGAAGAGGAAGGTAAAGGTCGCGTGTGTAGAGTTTCCTCATAACCTACATTG GAGGGGAACAAAAAGTGGGGGGGAAGGGCTTTCCCCAAATTCTCTTCCCCCCCACAAGTTTTTGGAATTCCAAACAAACA AGGCGACTTATCCCCATTTCTACCTTTTAATTCTCTAACAGTAAGAGAACAAATACGGCAACCAACTAGAAAACAACAGA GAGAGACTGAGAGGGAGATAACACATATCTCTAACATAGTTCAATTCTCCCATTATTCCTCATGCAAGTGACGATACAAT CCAACTCCCTCGGTATCTAGGGCTTCAAAGTTCTCCTAGTTTTAGTCATGAGACATTGTCGTGTCCCTTATTTTTTCCAT TATGAAAAACTTTTTGTTGAATTAAATTTGTCTTTGCTTGATTGGACAAACTGTAGCATGTGGTGGTAGGAGACTGTTTT TAAAGAGGACTTTACAAATATTTTTTGCTTCTTATGAATTTAAAATACTGATTTTAAGTTGTAAGTCAGATTATATGCTA CTTCATGCTTTTGCTTTCAAGATAATTTCAGTTATTAGTTTACTGCCTCAAATTAGAGTGGCGATGCTTCTCGTTGGATG TGTCAGAAATTAGTCTGTATCAATAAAGACTAGTGTTATTTAAAAATTTTGAAATGTGTATATGCATGCAGTCAATTGAT GTGTAGAATCCATTCATACATATATGCAAAAGTAAATAGTTTATCTACAATCACTTGGTTGTTACATCTATTTTGACCAC AAATGTTTTCTCTTCAGGTATTTTTGTAGCATTGGCTTTACGGTTTGATGTGTCCAGAGGAAAACAGCCCCAGTATTTCA AAAGTGCATTTTTAGGATACGCTGTTGGTGTGATCCTTACAATTGTAGTGATGAATTGGTTTCAGGCTGCACAGGTGACT GATAGTTCCATTTTATTCCTTTTTTATTGATAGTTTTTTTTGGGGGGGGGGGTCAGGGTTGTAATCATTATTGCCCAATG CACTACTAATACATGGATACCTTAGTTTGTGGAACTATCATGGATTTTGGAGACTATCCTTCTCTACTAACGTTTTCCCC TTTATTGTATTCTTGTTGTCAGCCTGCTCTTTTGTATATTGTACCTTCTGTAATTGGATTTTTGGCTGCTCATTGCGTAT GGAATGGTGAAGTCAAACAGGTTTGTTTCTCTTTTCTCATATCAGTGTTACTCCATCCTTTTTATGTGTTTTATTTGCTT CATGTTTTTTTTATATAGCATGTATAATGGAAATAGTGAATATTATTTTCAATGTAACCCCATTAAGAAATGATAAAGTG CCACATATTGCTGTAAAATCTTTTGGCAGTTTCTTAAAAAGGATTATATGAGGCATGAAATCGGCCACTGATAGTGCCAT ACATGGAACTCATTGCCAGTAGACCAACTTTATCCCATATAGCAATAATTGACATCATCTTTGGCACCACTAGCAAGAGA GTATATTTTCTAAATAGCCTTCTATATTGAAAATTATCATAGACATGGTTGTGTGATTTAAGAATTTTGCAGTGGATGCC TGGCATTTATGCTTGCTAGAGGTGGTTTAGCTAAGTTAGTTCTGACAACTTTTTCATTTTTACTTATGCAGTTGTTGGAG TTCGATGAGTCAAAGACTGCCAATTCATCCCAAGAAGAAGTTGATGCTAAAGTTACCAAAAAGGATGAATAAGTCAGCAT CCCCAATACCAAATACTTCTGAGTCATAGAAGAGACACTGTTATTTTTGTTTTTTGGGAACGCCATGACTTTTTGAGCTA ACTTATTTAGCAGCACACCTCTGTAACAGATTGTGTTTAAAAGAAATATGTTGGTGTTGCTTTTCAGTTTGCAATTTTGC CTTTACTTTTTGACGGCCCAATCATCACATATATTTCCCTCTTCCCTTCCGATCTCTCATTGTAAAATCATGCGGATGAC TAGATTTCTCAAAGGATTAATCATACAGAAAGGAGTCTCATTAGTCACGGTGATACATCCCAATCATAAAGGGACCATGT TTAGCTAGAGCATCTTGTGTTTTTTGTCAAAAGTTAGAGCATATTCAACCACATGTTATGGACCAAAAAGAAAACACTTG TGCCGAAAAATATAGGGTACTCTAATACTTTCTCGAATGAGTGAGTTCAACAAACTCTAAGCTCTTGCTTTAAG
CDS sequence (LotjaGi1g1v0399600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGAACACCGAGCGACTTGCGAATTTCGCTTTACTAGGTTTAACCTTGGCACCGCTTGTTGTGAAAGTGGATCCGAA TTTAAATGTTATTTTGACTGCCTGCATCACTGTGTTTGTCGGATGTTATCGTTCTGTCAAACCAACCCCACCAACTGAGA CGATGTCCAATGAGCATGCCATGCGGTTTCCCTTTGTTGGGAGTGCAATGTTGCTATCACTTTTCTTACTCTTTAAGTTT CTCTCAAAGGACTTGGTGAACACTGTTTTGACAGGCTACTTCTTTGTACTTGGGATTGTTGCGCTCTCGGCAACATTATT GCCATCCATTAAACGCTTTCTGCCAAATCATTGGAATGACGACAACATAGTCTGGCGTTTTCCATATTTTCGTTCTTTAG AGGTTGAGTTTACAAGATCACAGATAGTTGCTGCAATCCCTGGGACATTTTTTTGTGCTTGGTATGCTTTGCGGAAGCAT TGGTTGGCAAATAATATATTGGGTCTTGCTTTCTGTATTCAGGGAATTGAAATGCTTTCTCTTGGGTCTTTCAAGACTGG TGCTATTCTCTTGGCTGGTCTTTTTGTCTATGACATTTTCTGGGTTTTCTTCACTCCTGTGATGGTTAGCGTTGCCAAAT CATTCGATGCTCCAATTAAGCTATTGTTCCCTACAGCAGATGCTGTGAGGCCATTTTCAATGCTTGGGCTTGGTGATATT GTTATCCCTGGTATTTTTGTAGCATTGGCTTTACGGTTTGATGTGTCCAGAGGAAAACAGCCCCAGTATTTCAAAAGTGC ATTTTTAGGATACGCTGTTGGTGTGATCCTTACAATTGTAGTGATGAATTGGTTTCAGGCTGCACAGCCTGCTCTTTTGT ATATTGTACCTTCTGTAATTGGATTTTTGGCTGCTCATTGCGTATGGAATGGTGAAGTCAAACAGTTGTTGGAGTTCGAT GAGTCAAAGACTGCCAATTCATCCCAAGAAGAAGTTGATGCTAAAGTTACCAAAAAGGATGAATAA
Protein sequence (LotjaGi1g1v0399600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKNTERLANFALLGLTLAPLVVKVDPNLNVILTACITVFVGCYRSVKPTPPTETMSNEHAMRFPFVGSAMLLSLFLLFKF LSKDLVNTVLTGYFFVLGIVALSATLLPSIKRFLPNHWNDDNIVWRFPYFRSLEVEFTRSQIVAAIPGTFFCAWYALRKH WLANNILGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPTADAVRPFSMLGLGDI VIPGIFVALALRFDVSRGKQPQYFKSAFLGYAVGVILTIVVMNWFQAAQPALLYIVPSVIGFLAAHCVWNGEVKQLLEFD ESKTANSSQEEVDAKVTKKDE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 340 | 340 | 1.9E-201 | ||
| PANTHER | 1 | 340 | 340 | 1.9E-201 | ||
| Phobius | 1 | 6 | 6 | - | – | |
| Phobius | 7 | 24 | 18 | - | – | |
| TMHMM | 7 | 24 | 18 | - | – | |
| Phobius | 25 | 29 | 5 | - | – | |
| Phobius | 30 | 47 | 18 | - | – | |
| Phobius | 48 | 58 | 11 | - | – | |
| Pfam | 51 | 322 | 272 | 9.9E-93 | ||
| SMART | 51 | 310 | 260 | 2.9E-94 | ||
| TMHMM | 59 | 78 | 20 | - | – | |
| Phobius | 59 | 78 | 20 | - | – | |
| Phobius | 79 | 89 | 11 | - | – | |
| TMHMM | 85 | 107 | 23 | - | – | |
| Phobius | 90 | 110 | 21 | - | – | |
| Phobius | 111 | 136 | 26 | - | – | |
| Phobius | 137 | 156 | 20 | - | – | |
| Phobius | 157 | 161 | 5 | - | – | |
| TMHMM | 160 | 182 | 23 | - | – | |
| Phobius | 162 | 181 | 20 | - | – | |
| Phobius | 182 | 187 | 6 | - | – | |
| Phobius | 188 | 212 | 25 | - | – | |
| TMHMM | 189 | 211 | 23 | - | – | |
| Phobius | 213 | 231 | 19 | - | – | |
| TMHMM | 231 | 253 | 23 | - | – | |
| Phobius | 232 | 251 | 20 | - | – | |
| Phobius | 252 | 262 | 11 | - | – | |
| Phobius | 263 | 285 | 23 | - | – | |
| TMHMM | 266 | 288 | 23 | - | – | |
| Phobius | 286 | 290 | 5 | - | – | |
| Phobius | 291 | 309 | 19 | - | – | |
| TMHMM | 292 | 309 | 18 | - | – | |
| Phobius | 310 | 341 | 32 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Aspartic-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi1g1v0399600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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