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LotjaGi1g1v0403900.1

Overview

Field Value
Gene ID LotjaGi1g1v0403900
Transcript ID LotjaGi1g1v0403900.1
Lotus japonicus genome version Gifu v1.2
Description Protein kinase family protein; TAIR: AT4G28860.1 casein kinase I-like 4; Swiss-Prot: sp|Q8LPI7|CKL4_ARATH Casein kinase 1-like protein 4; TrEMBL-Plants: tr|I1K9C5|I1K9C5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0403900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:89283016..89289279) extracted from Lotus japonicus Gifu genome v1.2.

CGGAAAGCAAACTAAACCAACACAACACGCTACACGATTTTGATTGGGTTAGGTTATTAGGTAACCTGGAACAACGTTGA GAGCGCTTTGTACAGGTCAGCACCACCAAACAACTTTACATCCATAAATTCCTATATTAACCTCCCCTTTCAATATCTTT TCTTTTTCTTCTTTCCTTCTTCTTCTTCCATTTGCGTTCTCTCTCTCTCTCTCTCTCTGTGTTTCCAACCGAATCCATAT TCGCTGTGTTCTTCGTTCTCAGAATCCGCCACCAACCGCTGAACAACCACCATGGAGAGGATCATCGGCGGAAAGTTTAA GATTGGCCGCAAAATTGGTAGCGGCTCGTTTGGTGAAATTTATATAGGTAATGGATAAACCTTTGAATTCTTCTCAAACT GGAATTTATGGAGTTTGTGTAATCAATAATTGACATAGTTATATTGTTGTGCAATTTTAACATGCCTTTTTCTGCTTCTT GTTGTTTTTTGCAGCCTCAAATATTGATACCGCTGAGATTGTTGCCGTCAAGATGGTTTGTTTTCTTTCAATTTTAGCCT CTTTATCATCATGTCATGCAATTTTTGCTTTTCTTCTAATTTTTTTAATTATTTTTTCTCTGTTTTTTTGTTGTTGTTGT TGTTGCCTGATTGTGAATTTACATAGTCATAACTCATTGATTTCATTTTGATCATGAGAGTTGTGCTAGGGTTGCATCCT TTCTAATGTTGACTTTTTGTGCACGCTAAGCATTATCGAAGGAGACCAAAATTGCTTTAGTTATTGATCCAGTTATTTAT GAGTTTCCACCAGCAGAATTATTTATCTTATGTGCATCTAACAGTTTGTAGTTGGATCATGGATGTATCTGGTTGATTAC ATTGAATTACTTGCATAAACTATTGAAAAAACTTGGGTCAAATTTGAATGAAGATAACTATACTTTCTAAGTTCGTACTT TTTCCAATTGTTTTTCGTATGCAATTATTCAAGAACTGTAATAGTGATTTACAGCAGCTGTGTTTCTATTTTGCAGGAAA ACAAGAAGACCAAACATCCGCAACTATTGTTTGAGGCCAAGTTATATAGTATTTTCCAAGGAGAAAGTAAGTTATAGAAG AATCATTTTCGATAATATAAATGCTGTGCAAAAATTTTCCAAGGGTTATACTAATTATTTTTGTTCCTGAATCCTCTTAC TCTTTGGATTTTAGGTGGTATTCCAAGTATGAAATGGTGCGGTACTGATGGAGACAATAATGTTCTAGTTATGGATCTTC TGGGACGGAGTCTGGAGGACCTTTTTGTCTATTGCGGGCGGAAGTTTTCATTGAAAACAGTCTTGCTGTTGGCCGACCAA ATGGTAACCACTGATTCCTATCAGGATTGCTTGCTTAGATTTTCAAGGAAGAAACATTCGTTCCTACTGATTTTAATTTG TCGTCGGGATATTACCATGTTTCCTCAAGTTACTATAACAGTTTTTGTCTCTAACATCTACCCCTTTTAGTTAGTGCTCC GATACATGGGAGTTTTCAGTGAAAGCACATTAATTGATGATTAAGTCCTTTTTATTTACTTGACCACAGATTTCGAGAAT AGAGTACATGCACTCCAAGGGTTTTTTGCATAGAGACATCAAACCAGATAACTTCCTTATGGGAATTGGGAGAAAATCAA GGCAGGTAAAATCATCAAAACTCATTCTCTATCATGAACAACTTATGTGGATAATTTCCTGTCTGGTGATTCCTTTTATG CTTCCAATTCCATTTATATGTTTTCTGCAATTTGTTACATTCACAGGTTTATGTTATTGATTTTGGACTAGCAAAAAGAT ATTGGGACCCTAAAACACTCAAGCATATTCCTTACAGGTACATTTTGTTCTGTTCAATTTGATTTTATACTTAATGATCT CTTGTTATATGGATCCTGTTTTGCTATAATGTTTTTTAGTGTCATAAATCTACTTGAATGTTTTTCCACCTGACAAGATG TTTTCCTTTTGACTTTCCTTCTGATGAAGGCTAGTCATTCGGAAAAAGAAAAACCTTATTTTCACTAGAAGTTGTTTACT TTAGCGGTACACGTTTTCGTTGTTTCTTCATTTTCAACCCTAAGTTCTAGAGGTGTTACTAACAAAATCAGATTGTTTTA ATGTCATAGTAGGCTTAATATGTTGTAAAATACTAAAGAATCTATAAGATTATACTAAGCAAAAGATAAATTAATGCGGC TGGTATTTATTGGATACCATGCAACAAAATAGTCTTTAATCACGATTTCTGTCGCTAAATTTTATAATTACCAAGTTTTT TTTTTACTGGTCTAACCAGTGCGCCTATGCCATCCTTCCTGTGCGTTTTGTTAAAATAGACATGATTTTGATTTCTAAAA TAAACCTGCATTGTTGTTCATCAATGGGAAATCTTCCTCCAACTTGATATCTATGGAATCTCGAATAATGCTTTTTTGAA TTCTTCTGATTGATTCATTCTCACTGTTACTTGTGCTTGCCAGTTTGGGTTTTTCAAGCCAGGTTTTTTTACCTAACTTA ATCTTGTTATAAACATACAGGGAGAATAAAAACTTAACAGGGACGGCACGTTATGCCAGTCGCAATACTCACATAGGAAT TGGTGGGTAGAAAGAAAATTTTATTGTTTACAGCTACAGGTTGTAACTGACAAATTTCTCACTACTTTGGTTTTATTTTG TCAGAGCAAGGTCGTCGTGATGATTTGGAATCTCTTGGTTATGTACTTATGTACTTTTTAAACGGAAGGTACGTTTCTTC CTATTCATGTAGTTCTGTCTGCATCTTGAGTTTTAAAAAATTATGCATGTGAATATCAATTGCATAGATTTTTCAAGTAA ATATAGGGCTTGACTATCTGGTTTTTGCCTTTTTAGCCTTCCTTGGCAGGGTCTGAAAGCAGTCACCAAAAAGGAAAAAT ATGACAAGATTTGTGAGAAGAAGTTATCAACTCCTTTTGAGGCATGTGAATTTTTTTAATTTCTTAAAACAATTAATCCC CTGGTCCCCAATTCTTTAGAATTATGCAAAACAAGAAGAATCAACCGCAATTCAGATCTTAAGTTAGAACACTTTCTTAA TTAAACTATTAAATTAAGAGATTTTAAGGCTTGCTATTACTGAATCAATTAAATTTTAGTTCATCCAGTCCTTGAAGATT TTCTTATTGAACTTGTTTGTTACAGAGAAATTTACTGATTCAATATTTCTTGGTATTAGATGCTTTGCAAGTCATATCCT GTGGAGTTCGCTTCTTACTTTCATTACTGTCACTCCTTGCAATTTGATCAAGATCCGGATTATGGATTCTTAAAGCGTCT GTTTCGTGATTTGTTCACTCGTGAAGGTATTGGCTGTTTATTTTATATTTTTATCAAATGTTTGATTTAATTCATTTCTC TGTTAATTGGAAATATAGCTCCTTGTTTGTTGAAAATGACAATTTGCTTATTGGTTGATTGATTTAGCCTGTTGACTGTA GAAGTGGGTTATTTTATGGTTGTCATTAAGTATTTAACCTTACTTCCTATTTCGTCTAGTTATGCTAGATTTTGTGCCAG TAGCACAAAATTATTTACCAAGGCATTAATTGGAAAGGAGACCTACTTGAGGTCGAAAATAATGCAAAGCAATTTCTTAA AGTTTTTAAGGTCTTACTACTACTTTTCATTCTTTATTCTATCTCCAAAAGCTCCGCCTATATGTTATTCATAGTCGGTC CTAAACTTGGATAAAGGAGGAACATTGTTTTTAGGCCTGCGGTAGTCAACGTAAAATTGGTCGTATCTTCAATATGGATC ATGTGATCCATATAGCTGACCTCACTTAGTGTGATAATGATTGTGTTTATGTTTATGTAATTCTATAACCAAACGCATAA AATCAAGTTTTCAGATTGTGCAAATTTTATGCATGTTCATGTTTGTGCTTGGGAATAACTAATTGTATCATGCATCAACA ATCTTAGGGTTTCAAGGTTTATTTATCATGTTTTGGTGATCTTGTCTGTTGTATTTATTTTCTCCCTTAATGTACTAAGA AGTTTGCTTGGCTGAATATAATGAGCAGGATATGATCGTGACTATTTATACGACTGGTCCATCCTAAAATATCAGCAGGC GCAACAGACAAAGAGACCAAATCAATCATTTGTCAGTAATTGTAGTATTTTCTCAATAGTTATTTTTTATTCTTATTTTC ATATAGAAGTAAATACATAAACTCTTTTAAACTTTTTTTAATGATGGTCTAGCTTGCTTTTCTTAGTATGCATATGGAGT TTCTGATCACTTACATATTAAACTTTCTTGATTTTATTCTCTTTCTCACTTGAGTAAATAACTTATTTGCAGCCTTCAGC TGCTGTGCCTAGCAGTCTAGCACCAAGTCTTACTGAAAAGAATGCAGGTAACCTTAGTTTCTTATCATGTGGTTGAAGGA AGTGTGTTATATTATGTGATTTGCTAGCAGAGATTTGAAATTTCCAGTAGAATGAGTTAGAATTTAAAGTGACATTTTAA AGCGCACAAAAAAAGAAGGAAACAGTGACTTGCTTGTACTTTCATGTGGGATATTTTTTCCTGGATTTTTGTTATCTCTG CAAACAAAATATAATACCATCTGATATGCTAAGATACTAAGATAGTGTTCAATATGGACAGATATTACCAATGAACTGTT TGTATTTATTATAATTATCATTAACTTTTCTTTTTCACATAGAATTTTTGCTTAGCTGTAACAGTGTTGAACTGAGATAA CCTTACAAGTCTGAAGTATAGTGAAGTGATGCTTTCTATACAGATCACATCCTAATGCCTATGCCTAACATCTTTTCAGG AACTGATGATTCGGGTCAAATGAATATAACAAAAATGTTTGCCAATCTTGAACGCCCAAGTGTTTGTGCAAGGCCTAAGC CATCAAATGTTCAGAATCCGAATACCAAGAATCAGGCCGAGAAACATGTAAGTCACAGTAATTTCTAAGATAGGGCAGCC TTGCTTTTTTTCTGAGTGTTCCAGCTGTTATTTATTTCAATTGTGCTGATCTTTCTTTTGAATTTTTATTTTTATGTGGC TGAAGAATGTTCCACCCACTTCATCTGCCCCGCCCAAGTCATCTACAGAAAATGTCTCAAAGCCAGAAAGGTCCATAGGA ACTTCTAACCCGAGTCGTGTTTTTGGGGCTAATTCCCATGTTTCAAGTAGCTGGATTCCTTCTCTACGCCGAATTTCATC AGCCAAATAGTAGGTAAGGAAATCATTTATCTAGAGTATAGAGTTGGACTGAATGCTACATTATTATCGAACTTTCTTTA CTATAGCTGAGCCAGTCACTGACTTGTTGTGTTTCTCTAACAGGATTTGGAGGAGTCACTTAGATTTTTTTTTTGTTTCC ACTGACAAGCAAGATACCATGACATGAATGAACTTCCTTCACATGACACCTTCATCCCAAATGTATTGGTGGATGATACA TCATGTTAAGAGGGGCAAATGCCCCACTTTAAGACTTCAGAGAGAGGGAAATTAACGAGGTTGTACGATTTTGAAGAACT GGTTATGCTGGTGGGTGTCCACACACACAAGGAAGAAGTTTGGTGGAGTTAATTTTTCTCTTTATTTATGATGAGTGGAA CATGAATGCGTGATGGGAAGCCACAATCATTTTTTTGTCCCTCTCATCATCTAATTTCCTTTTGTTTTTCTCTCAAGCAT TCAGCACACGAATTTGTTCGTCTTTTTCTTGTGTACAGTTATGTTTTTTGTTAGCGTACAAGCTTACTCACTTCATACTA CAAGTTCATGTTTGGATGTGCATCTAACAAAAATAAAAGCTTCACATTGTAGCTTATGACCTAACGTGATTCTTTCAATG AATGCGGTGTTAGAAGTGAAGCCGAACACAATTGTTCACAACAATCTAGTTCATAGTTTATTGAAACAAATTGGATAGTT TAAGTTTATTTTGGTGTTAGAATCCGACTTATACTTCACCTTTGGACTTGGGTTTGTATTTTGATTTCTAAAGAACTTTC ATATTGTGGTTAGAATTAGAAGAAGTTTAATAAGAAGCGAATATTCAACAATCCAAACTATTATATGTAGGAGCAGGACC CTGCAAATACTTGCCCATGCAATAACTATGGTTCTAAATTGCAGTTGCGATTGCGGCTGCATTGCGGACAAATGCGAGTT GAAATTGTCACAATTGTGGTTGCG
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0403900.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAGAGGATCATCGGCGGAAAGTTTAAGATTGGCCGCAAAATTGGTAGCGGCTCGTTTGGTGAAATTTATATAGCCTC AAATATTGATACCGCTGAGATTGTTGCCGTCAAGATGGAAAACAAGAAGACCAAACATCCGCAACTATTGTTTGAGGCCA AGTTATATAGTATTTTCCAAGGAGAAAGTGGTATTCCAAGTATGAAATGGTGCGGTACTGATGGAGACAATAATGTTCTA GTTATGGATCTTCTGGGACGGAGTCTGGAGGACCTTTTTGTCTATTGCGGGCGGAAGTTTTCATTGAAAACAGTCTTGCT GTTGGCCGACCAAATGATTTCGAGAATAGAGTACATGCACTCCAAGGGTTTTTTGCATAGAGACATCAAACCAGATAACT TCCTTATGGGAATTGGGAGAAAATCAAGGCAGGTTTATGTTATTGATTTTGGACTAGCAAAAAGATATTGGGACCCTAAA ACACTCAAGCATATTCCTTACAGGGAGAATAAAAACTTAACAGGGACGGCACGTTATGCCAGTCGCAATACTCACATAGG AATTGAGCAAGGTCGTCGTGATGATTTGGAATCTCTTGGTTATGTACTTATGTACTTTTTAAACGGAAGCCTTCCTTGGC AGGGTCTGAAAGCAGTCACCAAAAAGGAAAAATATGACAAGATTTGTGAGAAGAAGTTATCAACTCCTTTTGAGATGCTT TGCAAGTCATATCCTGTGGAGTTCGCTTCTTACTTTCATTACTGTCACTCCTTGCAATTTGATCAAGATCCGGATTATGG ATTCTTAAAGCGTCTGTTTCGTGATTTGTTCACTCGTGAAGGATATGATCGTGACTATTTATACGACTGGTCCATCCTAA AATATCAGCAGGCGCAACAGACAAAGAGACCAAATCAATCATTTCCTTCAGCTGCTGTGCCTAGCAGTCTAGCACCAAGT CTTACTGAAAAGAATGCAGGAACTGATGATTCGGGTCAAATGAATATAACAAAAATGTTTGCCAATCTTGAACGCCCAAG TGTTTGTGCAAGGCCTAAGCCATCAAATGTTCAGAATCCGAATACCAAGAATCAGGCCGAGAAACATAATGTTCCACCCA CTTCATCTGCCCCGCCCAAGTCATCTACAGAAAATGTCTCAAAGCCAGAAAGGTCCATAGGAACTTCTAACCCGAGTCGT GTTTTTGGGGCTAATTCCCATGTTTCAAGTAGCTGGATTCCTTCTCTACGCCGAATTTCATCAGCCAAATAG
Download CDS Sequence

Protein sequence (LotjaGi1g1v0403900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MERIIGGKFKIGRKIGSGSFGEIYIASNIDTAEIVAVKMENKKTKHPQLLFEAKLYSIFQGESGIPSMKWCGTDGDNNVL VMDLLGRSLEDLFVYCGRKFSLKTVLLLADQMISRIEYMHSKGFLHRDIKPDNFLMGIGRKSRQVYVIDFGLAKRYWDPK TLKHIPYRENKNLTGTARYASRNTHIGIEQGRRDDLESLGYVLMYFLNGSLPWQGLKAVTKKEKYDKICEKKLSTPFEML CKSYPVEFASYFHYCHSLQFDQDPDYGFLKRLFRDLFTREGYDRDYLYDWSILKYQQAQQTKRPNQSFPSAAVPSSLAPS LTEKNAGTDDSGQMNITKMFANLERPSVCARPKPSNVQNPNTKNQAEKHNVPPTSSAPPKSSTENVSKPERSIGTSNPSR VFGANSHVSSSWIPSLRRISSAK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11909:SF322
1 413 413 2.2E-222 –
Gene3D
G3DSA:1.10.510.10
1 335 335 2.8E-107 –
PANTHER
PTHR11909
1 413 413 2.2E-222 –
SUPERFAMILY
SSF56112
4 290 287 3.51E-83
IPR011009
SMART
SM00220
9 291 283 1.8E-14
IPR000719
ProSiteProfiles
PS50011
9 277 269 28.344
IPR000719
Pfam
PF00069
10 225 216 7.6E-28
IPR000719
ProSitePatterns
PS00107
15 38 24 -
IPR017441
ProSitePatterns
PS00108
124 136 13 -
IPR008271
MobiDBLite
mobidb-lite
301 333 33 - –
MobiDBLite
mobidb-lite
348 423 76 - –
MobiDBLite
mobidb-lite
352 423 72 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0403900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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