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LotjaGi1g1v0408500.4

Overview

Field Value
Gene ID LotjaGi1g1v0408500
Transcript ID LotjaGi1g1v0408500.4
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT2G25760.1 Protein kinase family protein; Swiss-Prot: sp|Q852L0|HD16N_ORYSJ Casein kinase 1-like protein HD16; TrEMBL-Plants: tr|A0A0L9UH17|A0A0L9UH17_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0408500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:89841427..89849067) extracted from Lotus japonicus Gifu genome v1.2.

AAAATCTAGAACTACCAACAATCCCTTTATTCTCGTGTTTCCCTCCACAGATCTCTGAAATCTCCTCTCATCTCTTCCAA ACCCTAACCTTCTCTTCATCGTTCTCGATACGCCATTGTTCATCTTCTCTTACATTCATTCACTTCTTCACTGATCGATG ATTCTAGAACCTTCCCGAACCTCCCTCTTCTTCATGGCTCAACGCCACCCTTACCATGCCTGAACTGCGTACCCGACCAC GCAGAAACCGCCCGCACATAGATAACGCTAATCCCAACCCGATCACCCATCCGGTGGCCGCCGTAGTGAAGAATCGGAGA CAGAAGAAGGTTTGCGCTGCCGGTGATATTGTGAACAACGACGAAGCCGGTGCTGTTCGTGAAGGCAGAGCCGAAGAAGA GGTAGGAGAGAAGGTTTTGGGAGAGGGAGCTATGGATGACAACGATAGTGGTGGCTTCAGCGCTGATAAGGCTCCGGGAG CTGAAGATGAGGGCAGCACTGCTCCGCTTCCTGAGAAGGTGGTTTTGATTTCAAGATTTTCTCATTATTTTTGCATTTTG TTTTCTCTGTTCTCTGAGTAATATGCTTGCAGCAACGAAAGCTGGTGATTTTTTTTCCTCTGTTTCTGTATTAGTTTGCT GTGCTTTGGCTTTCAACTTAGTTCAGTTTGGTTCTATTGATGTAAAATGGTTTGTGTCTTTGTGATATGCAGGTCCAGGT TGGTGGTTCTCCGGTATACAGAGTCCACAGAAAACTTGGGAAAGGAGGATTTGGACAAGTTTATGTTGGTCGCCGCATAG GAGCTGGTTCCGGTGCTATTGAGGTATTGGTTTGAGAGTGTTGCTCTTTCTCTCTTTTGTTTGATTGACATATCTTTTGA ATGCCTTATGCCCTTACTCAAATAACTGCAGGTAGCCTTAAAATTTGAGCATAGAAGCAGCAAGGGGTGCAACTATGCAC CTCCTTACGAGTGGCAAGTGTACAAGTGAGTTGCCTTTCTTTTCTTTCCATGGGATGGGATTGCTCTCTAAGGTCTTAAT TTTGAATATTAACTGCTAATTTTACTATGATTGTGTCTTGTAGTACTTTAGGTGGTAGTCATGGTGTTCCACGAGTTCAT TACAAGGGACGGCAAGGTGACTACTATATTATGGTATGTACTTGTAAATTTGTTGGTTAAGGAATGATGTCTTGTGGGTT GCCTTTGAATGTTTTGCTAATGTAACACCATGTACAGGTCATGGATATGCTTGGCCCTAGTCTATGGGATGTGTGGAATA ATAACTCACAAACGTAAGTATCTTAGTTGGAATGTTAATGAAATGTAATGAATCTTATTTTTGTCAATGTTTTGATGAAT GTTGCATAGCTAACCCTCTTTTGTGGATTCAGGATGTCAACTGAAATGGTGGCGTGTATTGCAATTGAGGCTATCTCCAT ATTAGAGAAGATGCATTCTAGAGGGTGATGCTCATTTTCCTGATTATGCTTATTTTATATATATATATATATATATATAT ATATATCTTGATTTTCTTTGATTTTATGATTGAATTCAGCTCAGCGTGCTTCCTGAGTGGTCTCACTCTTCTCTCCACCT CACCATATAGTGTGATTGAAACTTAACTCAATCTAGTTAATAATGTAAGGGTAATTAGTGTAAGATAAAAAGAAAGAGGT GTGGTCAGTGTCACTTAAGCATACTTGAGGTGAGGTTAGTGTAATTTTCCGTAAAAAAAGTGAAATAAAAGAACAAGAAT ATGAATTTTTCCCTAAAATAAATGAAAGAAAGTGACAAGAGTGTAAGATTTGAAAATTTTCCCTATAATATATGTCTTTT ATGGATCAATTCTTTCTTGAAATAATTGGTGTGAGATTTGACTGTACTCTTTATTGTGAGGCAATATTGGTCAACCGCAT ACAAATAGTGAAAAAGTATAGCCAAGTCTCACATCGGTTTTTTCAAAAAAAGAGTTGAGCCATAAAGCATATGATAGGAA CATCAACCGGAATCTTCTACACACTTTAATCAACAATTTAATCTCTTATGCGTTTGAGTTAATTTTTTACTCACATTCTT GTCCCTTTCTTACATTTATTTTAGGGAAAATTTCACACTCTTGTCCCTCTCTTTCATTTTAATAGAGTGATTGTGTGATA TGATTGAAAGAGGAGAGATAGATAGATTGTGTGAATATGTCATAGCTCAACTAGATTACACATGGTACCCCTCAAATTAA CATCAGTTAACAGGAATGGAAATCTCCTACGTCACTGTTCTCTATCTCATCCCCTCCTGTCAATGAAACTCAATTAAAAT TGCCTCATCATCAAACCCAATCATTTAACAACAACCGTTTCATCTCTTTATGTTTGTTTTTCTTCTGGTCGTTATTGTCT AACTACTCCGTTGAGGGAGCTTCAAGGTCTGGCCATGACCATTCTGGTGACTTCAGAAACAAATCGGCCGCCCCATCGTC GGTGTTGTGCTTCCACAAGGCAACTCTGCCGCTGAAAAATATTGAGCCACCCATCATCATGTAGTTGATTTGAGGAGTCA TGCAAGAGTTGCCAATTTATTTAGTTAATTCTTTGAATAGTTTAAGGCTAGAGGGGCAGAAGACATGTCATTGGGAAGTA TGTTCTTATCATCTATTATGAACTTCTCCCTTCTTTATGAGTATTTTAATTGCCCACCTATTTTAGAGTTAATTTTTTTT TCTTGGATTATGTTTGTAGCCATAGCATAGCTTCATGATAATGTTGTTGATGAGGTGATCATTCTCAATGATTGAACTAT TATTTTCTATCATTTGCATTCATCATTTTCTGCATATTACGTTAGCTAATTTCAACTAGTAGTACATTGTATATTAATTA GCAGAGTGATACACAACTATATTTAAGGACCCCTTAATGGAGTTCATTGCCTTTTTTGTGAGTAGCGCTGCAACCCAAGC ATCCACTCATTTGGAGTATGCTTATCTAGAATGTTTGGTCCCTTGGTGATAAGAGAAGCCAATTGTTTAGCAAAAGCAAA CTATTAGCAACTATTAGCAGTTGGGGAGCTTGAGGGGTGAGGACCATGTCAGAGCGCTCGGATTTTCTATTGGGAATGTA CATCAAGAAATGATTTCAAAATACATATCTTGAGCGAATTGTTATATTGTTTTGTGGTTACTGTCATGTAACAATCCATT CATAAGAAATGAAAGTAAACCTCGAAAAGCATTTTCCACGTTTCATCCCTGCTTCTAATCAATTGGTAAATACATAGATT GTGATTATTGTTTTATCATACCATACAGATGTAAGTTGGAATAGTATGATCAACATATATAAATTTTGAATATATTTACT AAATGGTTTCTAGTACATATATCAATTACACATTCACACTTTTTTGCAATCAACATTTTATCATTCTGCTGTTATCATTT CAGATACGTGCATGGTGATGTGAAACCCGAAAACTTTTTGCTTGGGACCCCTGGAACTCCTGATGAGAAGAAGTTGTTTT TGGTTGATCTTGGATTAGGTTATTATACCATATCACCCTTGAATCTTTGATGCTTTCATTGTCAACGAAGATATGCTTAA TTTCTAACAATTTGGGCACTCCTCTCACAGCATCTCGGTGGCGTGACAATTCAACTGGCCTTCATGTTGACTATGATCAA CGTCCGGATGTATTTAGGTAATTTATCTGTTTAATTTCTATAAACTCTTGTCAATATCTGGCTTTTGAATGACTCTGTAT ACCATATTCTTGCCACAGGGGCACAGTTCGATATGCTAGTGTGCATGCTCATCTTGGTAGAACAGGTAGCAGGAGAGATG ACTTAGAATCTCTTGCATACACACTTGTCTTCCTTCTTCGTGGTCGGCTTCCTTGGCAAGGATATCAGGTTATCATTGTT TTGAATATAATCATTTTATTATTTATAATAATGAAAAACATGAGTCTTATCAGATTGTTTGTTACAGGGAGAAAATAAAG GATTTCTTGTCTGCAAGAAAAAGATGGCAACTTCTCCAGAAACTATGTGTTGCTTTTGTCCTGAACCTTTCCGACAGTTT GTTGAATATGTAGTGAATTTGAAGTTTGATGAAGAGCCAAATTATGCTAAATATATATCCCTTTTTGATGGGATTGTGGG TCCAAATCCTAACATTAGGCCAATAAATACTGAGGGTGCTCAGAAGGTACTTATGCTGTTATTACTTTATAATTTGCATT TTATTGTTTACAGATCCAGAGTCTAACTCGTGTTACCATTTTTGGGCTTGTGTTGTGAAGCTTATATGTCAGGTTGGACA CAAGAGAGGGCGATTGACCATGGAAGAGGATGATGATGAACAACCAAAGAAGAAGGTCCGAATGGGAATACCAGCAACAC AATGGATTAGTGTTTACAATGCTCGTCGACCAATGAAGCAAAGGTTTTATGCTGATGTTAAATAAGTTTTTGCAGATTAT TTCTGATTGTCAGAATTTAAATGTTTTTATTTTGGTATAGGTATCATTACAATGTGGCTGATGCACGACTGGCACAACAC ATTGAGAAAGGGAATGAAGATAGTTTATTTATCAGCAGTGTGGCTTCTTGTTCCAATCTTTGGGCTCTCATTATGGATGC TGGCACTGGTTTCACTGCACAAGTTTATGAACTCTCTCCCCACTTTCTTCACAAGGTTGGTTAACTTGTGTTTCAGCTAT GGTATTATGTATCAAATGTTAGTGATATCTTCTTTGCTTCTATGATAAAATATTCTGCATAGTATTCTACTTTGAACCTA ATACAAGGTGACAAACTCATATTTTTATAGGAATGGATTATGGAACAGTGGGAGAAGAACTATTACATTAGTGCCATAGC TGGAGCTAATAACGGATGCTCATTGGTTGTTATGTCTAAAGGTCGAAGTCCTATTCTACATGTATTGTGCGTTTAGGATG TGGCAATAGTTGGCTTTGTGTAATTTGTTTGTTCAAATTGTTGTCTCACTTTGTTAGTGGAATATTGTTCCTGTTAGGGA CCCAGTACTCACAGCAATCTTATAAAGTCAGTGATTCATTTCCATTTAAGTGGATCAACAAAAAATGGAGAGAAGGATTT TATGTAACTGCTATGGCCACTGCTGGCACTAGATGGGCAATTGTTATGTCCCGTGGTGCTGGGTTCTCAGACCAGGTCTT GCTTTTTATTTTTTCGATATTTTTTTATCATAAATCTGTGGCACTGAGGAATTCTATCTGATATATATTTTCTTTTCTTT CTTTACTTAATGCTAGGTTGTAGAACTTGATTTTCTGTATCCCAGTGAAGGTATTCATCGGAGGTGGGATAACGGTTACC GCATTACTTCAACTGCTGCCACATGTGACCAAGCTGCTTTTGTTCTTAGTGTCCCAAGAAGAAAACCAACTGATGAAACT CAAGAGACACTCCGGACATCTGCTTTTCCTAGTACTCATGTCAAGGTAAATAGTGCACCTGATTTTCGTGGATAATTCCT TATAATACATGCTTATGTATGATATTTTGTTTCTTCAGGACAAATGGGCAAAGAATCTCTATATTGCTTCTATTTGTTAT GGGAGAACAGTTTCATAAACTGTGGATGATTTTTGAGACTCCAGCTGACATCATTTTGACCTCGTGCTTGATCCCGTTTG CCCATACATCTTTCAGTTGGGAATTGAAGATCCTGGTCTGACAATTTTTCTGAACGCAGTTCAGTAATCAGCGTTGATGT ATGCTAAACCTTTATTTATGATTACTATCACATATCATGATACAAAACCTGTGCACTGTATTTCAAGTTTCAACTGTCAA AAATGACAATGAATCATCCGAAAAATTAGATCTTTTTGTCAATTAGGGCAAGTTTTTAATATGAAGTACTTTGTACATAA TTGAACAGTAATTATTATGTTGAAGGCATGTGCGCACAGGTTAGGCTTTTGTTTATTTATGCTATTTTACTACTGTGATT TGCCAGTGGGTACTAATCATTGTAAGTAGTTCAGCCTTGTACTTAGCCCTTTTTATCCCTATCTCCTTTGACTTAATGCT ACTCCTGGGCCTCTCGATGCCTGAATTTGACCTTAAAGACAGAAAGAAATTGTATACTCTGGCAGCAGTTTGATTGTTTA ATCACTATAATCACTATAATCACAATGTTATTATTGTTGTTATTGATGTATTTCAAGTGATAGTTATATAATATGTTCAG TTACCTCCAGACATGTATTTGCTTTTGTGGGTTCATATCATGAAATGTCAATGGGGTTAGTGTGATTGAGTGAAGGATGA GGATGGCTTAGTTTTAGTTTCATTTGTCCCCAAAATTTATTCTCATATTTTTTGTGTTCTAGAAAAAATTGCACATTTAG TTTGAAGGTGTATTTGCATGTCAATGAACTTCATTGTTTCTGAATGGGAGCTATGTATCAGTTTAGTTATTAGCAGTTGC AAAAAATTGCCATCTATTTGACCAGTCTATGAATTTGAATATTACATCTGTATTTTTCTGACCACTTTCTACTTCCAGTA TCCGAAGTCCGAATGATGGGCTTCTTCTGGTCACTCACTCTACATGACTGGTTGCTATATTGTTTGATTCTTTTTCTAAT GTCAAACACTGCAAGACGCACTTTTGATTATTTTGAGAAGTTGGTATTGCGGAAGCTCATCAGGGGTGATAACTTGTATT ACTCTTCACAGGGCTTCTGTATTACCCGTGAGTTCAATTGAACATAAGGTATTTAATTCTGAAGCTATTATTCAACTTAA TTGTTCAGCTGAGACTTTCACATGGTTTGATCTAGATATGCAGCACTATGTGGATGAGACATTTGATGTTCAGTTGGCCT GATGGCACCGAGCTTTTAGTGCTCTCAAATAAAATCTGGCTCTTTGGATGCTTCATTTCTACTGCTTTGGTGGTAACTTA TAGATTTCTTTGGATGGTCAAGACCATGATAATGATGCTGCAACAATCTGAATGTCAAAACTAACTGGGAAGCTGTTCAA GGAAAATGGTTTCCTTAGAACTATTAACTGTACGTGATTCTTTCCTCTTATCAAATATTTGGGTTTTCTTTGGGAATCTA GGGGGAGGGATTGTAATGGAAAGTGAGGAATGGACCCTCTTGTTTCAAGCATCTTAATTTTATTTGTGAATATTGTGAAG GATTGATGCTGAAGCCCAGAGGTGGCCTTAACTTGTTATCTTCTCATCTTGTCCGAATAGAGAAAGTGCTGTGCCTCCTA AAAGTTTCATGTTCAAGAACTGCATACAAGGATTTTCTCTATCTTCTTAGCTCTATTGGGCATCTGTTGTAGGATTTTTA AACCATTGTTGCTGTTAGCCTGTTACAACAACTTAAATAAGGGATGATTAAAGCTATCTACAGTTATGATTCTAATACCG TAACATAGTCTTTGTTTCCGAGAAACAGAAGGGAGGGGAAGGGTAAGAAGAGTGGATCAAGATTATCCCATGTTCTCGCA TGTTGTAATTTTGTTAGTATCTCTCTTCACATGCATTAAATATGTAGAAACAAATCGAGTCCTTTGAATATTTATGAAAA GAGAGATAGATTCAAACATTGTCACTCCAATTTACACCGAT 

CDS sequence (LotjaGi1g1v0408500.4) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCCTGAACTGCGTACCCGACCACGCAGAAACCGCCCGCACATAGATAACGCTAATCCCAACCCGATCACCCATCCGGT GGCCGCCGTAGTGAAGAATCGGAGACAGAAGAAGGTTTGCGCTGCCGGTGATATTGTGAACAACGACGAAGCCGGTGCTG TTCGTGAAGGCAGAGCCGAAGAAGAGGTAGGAGAGAAGGTTTTGGGAGAGGGAGCTATGGATGACAACGATAGTGGTGGC TTCAGCGCTGATAAGGCTCCGGGAGCTGAAGATGAGGGCAGCACTGCTCCGCTTCCTGAGAAGGTCCAGGTTGGTGGTTC TCCGGTATACAGAGTCCACAGAAAACTTGGGAAAGGAGGATTTGGACAAGTTTATGTTGGTCGCCGCATAGGAGCTGGTT CCGGTGCTATTGAGGTAGCCTTAAAATTTGAGCATAGAAGCAGCAAGGGGTGCAACTATGCACCTCCTTACGAGTGGCAA GTGTACAATACTTTAGGTGGTAGTCATGGTGTTCCACGAGTTCATTACAAGGGACGGCAAGGTGACTACTATATTATGGT CATGGATATGCTTGGCCCTAGTCTATGGGATGTGTGGAATAATAACTCACAAACGATGTCAACTGAAATGGTGGCGTGTA TTGCAATTGAGGCTATCTCCATATTAGAGAAGATGCATTCTAGAGGATACGTGCATGGTGATGTGAAACCCGAAAACTTT TTGCTTGGGACCCCTGGAACTCCTGATGAGAAGAAGTTGTTTTTGGTTGATCTTGGATTAGCATCTCGGTGGCGTGACAA TTCAACTGGCCTTCATGTTGACTATGATCAACGTCCGGATGTATTTAGGGGCACAGTTCGATATGCTAGTGTGCATGCTC ATCTTGGTAGAACAGGTAGCAGGAGAGATGACTTAGAATCTCTTGCATACACACTTGTCTTCCTTCTTCGTGGTCGGCTT CCTTGGCAAGGATATCAGGGAGAAAATAAAGGATTTCTTGTCTGCAAGAAAAAGATGGCAACTTCTCCAGAAACTATGTG TTGCTTTTGTCCTGAACCTTTCCGACAGTTTGTTGAATATGTAGTGAATTTGAAGTTTGATGAAGAGCCAAATTATGCTA AATATATATCCCTTTTTGATGGGATTGTGGGTCCAAATCCTAACATTAGGCCAATAAATACTGAGGGTGCTCAGAAGCTT ATATGTCAGGTTGGACACAAGAGAGGGCGATTGACCATGGAAGAGGATGATGATGAACAACCAAAGAAGAAGGTCCGAAT GGGAATACCAGCAACACAATGGATTAGTGTTTACAATGCTCGTCGACCAATGAAGCAAAGGTATCATTACAATGTGGCTG ATGCACGACTGGCACAACACATTGAGAAAGGGAATGAAGATAGTTTATTTATCAGCAGTGTGGCTTCTTGTTCCAATCTT TGGGCTCTCATTATGGATGCTGGCACTGGTTTCACTGCACAAGTTTATGAACTCTCTCCCCACTTTCTTCACAAGGAATG GATTATGGAACAGTGGGAGAAGAACTATTACATTAGTGCCATAGCTGGAGCTAATAACGGATGCTCATTGGTTGTTATGT CTAAAGGGACCCAGTACTCACAGCAATCTTATAAAGTCAGTGATTCATTTCCATTTAAGTGGATCAACAAAAAATGGAGA GAAGGATTTTATGTAACTGCTATGGCCACTGCTGGCACTAGATGGGCAATTGTTATGTCCCGTGGTGCTGGGTTCTCAGA CCAGGTTGTAGAACTTGATTTTCTGTATCCCAGTGAAGGTATTCATCGGAGGTGGGATAACGGTTACCGCATTACTTCAA CTGCTGCCACATGTGACCAAGCTGCTTTTGTTCTTAGTGTCCCAAGAAGAAAACCAACTGATGAAACTCAAGAGACACTC CGGACATCTGCTTTTCCTAGTACTCATGTCAAGGACAAATGGGCAAAGAATCTCTATATTGCTTCTATTTGTTATGGGAG AACAGTTTCATAA 

Protein sequence (LotjaGi1g1v0408500.4) extracted from Lotus japonicus Gifu v1.2 Proteins.

MPELRTRPRRNRPHIDNANPNPITHPVAAVVKNRRQKKVCAAGDIVNNDEAGAVREGRAEEEVGEKVLGEGAMDDNDSGG FSADKAPGAEDEGSTAPLPEKVQVGGSPVYRVHRKLGKGGFGQVYVGRRIGAGSGAIEVALKFEHRSSKGCNYAPPYEWQ VYNTLGGSHGVPRVHYKGRQGDYYIMVMDMLGPSLWDVWNNNSQTMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENF LLGTPGTPDEKKLFLVDLGLASRWRDNSTGLHVDYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLVFLLRGRL PWQGYQGENKGFLVCKKKMATSPETMCCFCPEPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPNIRPINTEGAQKL ICQVGHKRGRLTMEEDDDEQPKKKVRMGIPATQWISVYNARRPMKQRYHYNVADARLAQHIEKGNEDSLFISSVASCSNL WALIMDAGTGFTAQVYELSPHFLHKEWIMEQWEKNYYISAIAGANNGCSLVVMSKGTQYSQQSYKVSDSFPFKWINKKWR EGFYVTAMATAGTRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDNGYRITSTAATCDQAAFVLSVPRRKPTDETQETL RTSAFPSTHVKDKWAKNLYIASICYGRTVS 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite 1 24 24 -
PANTHER 59 662 604 0.0
PANTHER 59 662 604 0.0
MobiDBLite 68 103 36 -
Gene3D 85 434 350 1.3E-84
SUPERFAMILY 110 384 275 4.32E-61
SMART 110 401 292 1.9E-11
Pfam 110 337 228 1.1E-18
ProSiteProfiles 110 389 280 23.496
CDD 110 379 270 2.923E-136
ProSitePatterns 116 142 27 -
ProSitePatterns 230 242 13 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0408500.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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