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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0416800 |
| Transcript ID | LotjaGi1g1v0416800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ADP-ribosylation factor family protein; TAIR: AT2G18390.1 ADP-ribosylation factor family protein; Swiss-Prot: sp|Q9ZPX1|ARF5_ARATH ADP-ribosylation factor-like protein 2; TrEMBL-Plants: tr|A0A0L9URD7|A0A0L9URD7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0416800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:91009453..91016219) extracted from Lotus japonicus Gifu genome v1.2.
CCTCTCTGACCGTTGATTTCATCCCATGGTCCAAAAATATGAAGCATTTTAATAAAAAAAAAAAAAAAAGTAACACGCAC GTGACGCACAGCAGCAGGAAGCATTACAGTGAAGAAGAAGAAGAAGAACCACCGCACCGCACCGCACCGCACCGCAGAAA CCGACGCCAGTCATCCCCACCAGTTGGCACCATCGTCGCGCAGCCACCAAGCCCATCATCTCCACCGTCCTAATTCATCT CCGCCACCAGAGGCCATCTGAGAATGGGTCTTCTTAGCATCATTCGGAAAATCAAAAGGAAAGAAAAGGAAATGCGAATT CTTATGGTGTAAGCACTGCTGCTTGTTACTTGTACTGCTCTCTTCCCTTCCATTCCATTTCTCTCTAGATTAATTTAATT TCATTATTTCAGTACAGTAGTAGTAGTAGTAGTAGTAACATTCAAAATCACCTCTTGTGTAGTGGATTGGATAATTCTGG CAAAACCACTATCGTTTTGAAGATTAATGGCGAGGACACTAGTGTCATCAGTCCCACCCTTGGCTTCAACATCAAAACCA TCTCCTACCAAACGTAATCAATCTTTTACTTCTTAATTTGGTTGTGGTATATTCTAAGAGTATAATTGGTTTGTTTCTTG AATATCTGTGGAAGCTTTTGCTTGTAATTCCTTCAAAGAATGTTGTTAGCCTTTGTTTTGCTTAGTAGATATCTCAGTGC GATTTACTTTACTCTAGAATGTTAAGGCATTTTTATCTGCATTGACAATGACAGTTACACTCTGAATATATGGGATGTTG GGGGCCAGAAAACAATACGATCTTACTGGAGGAACTACTTTGAGCAAACAGATGGTTTGGTTTGGGTAGTTGACAGTTCC GATCTCAGAAGGTTGGATGACTGCAAAATGGAGCTAGATAACCTTCTAAAGGAAGAGGTTTGTTCAATATATAATGGTTT TTGCTTATTCACCTAACAAATTGCTTAATGTTAATGTTATACTTAAATGAAGATATTCAGTCATTTTTTCTACCAGTTAT AAATCTATGCCCATTATGTTTGATCAATTGGTTGGCATTAACCATTGTGTCATATGTGCCTCTGTATCCAAGCGCAGTCA TTGCTTAAAGTGAATGCTTTGCAGGATCCTAAATCCAGTTGCTTTCCTTTCCTTTAGACAACTTACTCATTTACCTCATA GGAGAAATTATTTTGTAAATTGTTACCAAAAAGTATCAAGTACTTCCATTTAAAAATGATAGTTGTGTTTGTTTTACCAG AACCAGCTAATATGTGTTTCTCATTGTTGCTAATTTGGAATGGTCAAATGATTATTACTCTTTTCTTTTTTGGGGGGCTT GTGAAGTACTGATAATTTCAAATCTCAATAGTTTTATGTTTCAAATGACAGAGGCTATCAGGATCATCCTTACTGATACT AGCAAATAAACAGGACATTAGAGGCGCACTTACACCTGATGAGATAGCTAAGGTAATTGCTTACAGAACTACTCATAGAA ATAGCTGTAATCAAGTCTCAACCAGGGAGTTGAAATATCCAACCATAAGTAGTTATAGAGTATATTCTGAGTACAAATTT ACATAGTAATCTTTTTGGGCGCTGAAACTTTGTCTTGGTGTGTCTGTGTATTTATGGAACTGGAGTTGGGGAGCATGGTT GTTGAACTTATATGTTGTGTAAAACCAATCATGTTTAGGACTTTCTGCAATATTTGTTTACTAACAGTATATTATTAGCT GATTTCTATTCAAACAATGGTCACTGAGAGGTAGTAAGTTTCATGCATGAACGTTCCCACTTCGTGGAATTGAATGCGTT GACTAATCAAAATAACTCATCTAGTAGATTTGAACTAACTAATTTGTAAATCAATGATCTTCACTTTATAAGGACCATCA TGGCTATACTGTTGAGCAAAGTTTACAGTCCACTGTTTTCTCTTTTGGGGTGGGGGGTTTGCTTTCTTTGAAACACACCT ACCCATGGCAGTAACTAATCATGATATATTTTTTTTTTATTCTTTTTATAATGGTGGGTTTGGTTTTGCCCAACTTAGGC AGCTTGTTGTAACATTGTTTCTTCAGTGATACCTGAAAGCATATAGTGTTTTCTCACTAGGTGGCATTGCATTGACAACA TGGATAAAAAAATATTGTCATGATATGTAGTTCACATTTGACAAAATAAAGTGAAGTAAGTAAAATTGTTCATTCATTTG TCAATATCCTGAATAAGGCTATGCTTGGATAAACTAGGATGGAATGGAGTTGAGGGAAATGAAATGAAATAGAATAGTAT TACACTTTCGTTGTGTGGATTTTTTTATGGAATGGAGAAAAGTACTTGTTTTATCTCATTCCCCCTATATTGGTTATTGG ATGGAATGCACTCCATCATGTTCTAGTCCAATTCATTCTGTTTTAAAAAATTCAAACAATGGAATCTGTTATGATCCCAT TCTACTCCATTCCATCAATTCAAACAGTACTTAATAGAAGCACCCCAAGCATATTCTCACAGTAATGTTTCAACAGCTTT GAACTGATTTCAGTGGGTTAGGCGTCAAATTTGTTCAATGTACTTAACAAATTGATAAGTATTGCAACATTTGAATTTTA CTTACTTTTAGAAAACAAGAAGCTAATTGTTAGATATAATTAATATATAATTGTTTCTTGTAAGTTTTAGATTTTCTTAT CTGTGACTGTGCAGGTGCTGAACTTGGAAGCTATGGATAAATCTCGGCACTGGAATATAGTTGGCTGTAGTGCATACACT GGTGAGGGTCTTCTTGAGGGATTTGATTGGTTGGTCCAAGACATAGCCTCTAGAATCTACATGCTTGACTAATGATTCTT ATGCCAGTAGTCATGAAATGGTTCAACTTAGAAAAGCATCATTAACCTAATATGCTGTCACTGAAGGACACTGTCTGCTG CATCAATGAGATGTTCTGGATAGGATTCTTATCTCTCTTTTTTCCTTTTAAGTTCAAGCTTGTAGTCTTGTAAGGGATCG AAATTTGTATGAGGGATTTAAATTGTTTGCGCAAGATCATGTGTTCAAATTCATTGTCATCACACTCTCCCAAAAAGAAA ACCAAGTTTGATATATTTTCCGTGCAGATGAAGTTGAGAAATAGGAAAAGAAAAAGCTCCCATCTGCGGATATAATCGTG TATTATGAGAAAAAAAGAGTCTTCTTTGGGCACCATTCTATTATTTTCTTTTATTTTTGTTGGTTAGCAGTTGAACACAG CACCATCGGCATCTGCAACAAGCTTTATGCCATGCATTCAAAACTTGGAAACAATTACATAACAGCCTTTTTCAGCTCAT GATAAAACAAAAATCAGCAACATCTCATGTTCTTGTTTGTATTTTGTAGTATTACATGGAACATCAGAGTAAAATTGCCT TAAACTAGGTATCAATCGGACTAAATTGTACTACTGCAGCAGCTATAGAGCTTCCAATAGGAGTTTCTCTGTAAGAGCTT TTGAAAGTCCCATCACAGTATCAGCTGACCCAACCTATAACAAGGATCACATCGCTCATTTTGTTAAGGAAACGGAGAAA AGAGGGATGCATCCACATTTATCTTAAATATCACTCAAACATTCTCGAAAAATAACTCCATTTGCATAGATGTGTGGGAA ATGCGTAAAAGGTTAAAGCTACAAATATTTTCTTGCCCATATATTAGAAAAAACCAAGAACTGGCAAAAGAGATTACAAA ATTACAAAATTGGACATTTGGACCCATGAAAAGGCATTGAGTGCAAGTTTGGAAAATTTTCTGCAATTGATTCTAAAGTA AAAATCAATTCAGGAGAGAAGCATCTCAGAGAGTAGTTTTTAGGTGTTAGAATTTGATTCTAAGGAAAGGGAAATTGATC CATATATCATATGAATGTGATGCACATCATGAATCGATTTATGCCACATGGGTCTATACTATCGATTGCGAATAACTTCT TGAGAAAGCAAGATAACTTACCACTGCGTCCACAAAGGGTAAGGTCAAGGGGTGTTCCAGCATCAAACCCCCAGCAACAT TGAATGTAACTCCCTCTTCAATCTGAGAAGCTCCCATCAAATAAGAAAACTCATAGTATTCAGGTTGACAAGAATTTCCT GAAAGAATTTCAAAAGATCATATGTTTTGAGAACTGGTTAAAGTACTCTTTTCACCTTCATACTTAGCTCAGTGCAAGGG TGAAAAGTGTACTTCTAAAAAAATTACCAGATTATCAATGACCTCGTCTGGTATTTCAAGGAAATAAACCTGTCATTTAG TGACAAATGTTAGTAACCTGTCAAGTCAAGAGAGAGACATACTGAGTTCATGAATAAAATGTATCAGTAAAACAATAGGG CCTGGTTGGTAGCTAAAAGATTTGAGCTTGATGGAGATAGGGGAAGAGGGATGGAAGAACAGGTGTCTCTCTTTTTCAGG TGAAGAAGAAAATTTCTTTCCCTACAATGAATCCTTTTAATACTTAGCACAGTCAACAAATAAGTAACATTGAAAATCCA TTTCCAGCATCTAATCTTTATGTTGAAATGCACTAGGAAGAACCTAGCTTATGAACCTAAAGACCCAAATGGCATAAAAC AATTCGATTTTTATTGACACAGAAGAACCTAGCTTATGGATTAGCTCAAGCACCAGCAACCTGTACCTCTGCACTTTCCC ATCCCCCACAACGTTTTCCAGTCGTGAGGTTAGTTACCACAACAGACCCTACCACAGCTGCATGACTACCAGAGTATCCT GCAAATAACTCAAATTCGTGAATACGGCCGTTATATCTGCCTATAATTCCCAACAACAAAAGCTGGGGGCCAAAATTCAT TATGCTAACCTTTGACGAATTCTCGTGCTTCTTCTTCACTAGTTGGTTTTTCTCTGATTATTCCTCTGTACACCACAACC TACAAAACATTAGTAGCAACAGTCGTACAAAAGTTTCGACTTAAACCAAAAGAAAATCAGTAAAAGGTGACCATATAGGA TTTAGACTGTAAATAGAAGTTTACGCAAAAGTATATAGAATGTAAGATGTGGGGATATTATGCAAAAAAGTTTAAATAGA CAGCACAGGTTAACCCCGACAGTTTCAGAATGAAATGCGGGGTGTGCAATTAAAGATCTGATCATAAAAATTAATGAAGT TTGATTTTAAAATATAAACTTCTCGTTTTAAAAAATCAATCAAATGGATGTCAATTTTACAGTTCAAAAAGAAACTGTGG ACGACCAAATCCTACACAGCACAGTGCCTAAGCCAAATATTTAGCCTGAATTGTAACAAAATGGAATTTTCATTAGAGAT GGTTAATACACCTGATACACAAGTACACAACTGAGCTTTATGAATATTTTCTGCAGGTTTATCTGCTTTAATTCGTACTA TCTTTCTCCGTATAAGTAACTAATCTTTTTCATGTAGGAAGTTAACATCTTTGTAACAAGCTTCTGCTTTGGAGGATTCC TTATTTTTGTCCAAGATCAATGTTCTCTCTTTTCTTTCTGCTAACATAGTTATTTAATCAAAATGAAATTAATTTATATG ATTCTAGACAGCAACTAAAACGTAAACTGGGATGGGCTATTGACTCAATGAGGCCTTGGCAGAAACTAGAATAGAGATTG AGAGTAACATAGATATTATCTGTAAAAGGAAAGTTAAAGTCATGTTTTTCTGCTTTATGCATATACAACTAAGTTAGCAG TCATTTATTATCAGCAAAAAAATAGTGAAAAACAACAAGAACGGTACATACAGTGTCAGCAGTGATTAACAGTGTAGCAG AAGCATCTTCCTCCAATGGACCTTCAGCAAGAAGCCTTTGCACAATAGCATCAGCCTAATAAGAATATCAAGGTTAGAAA ATCTAAATGCACCATGTAAAAATCATTATGTGAGGAGAGTTTCAAACTGCTCATGAGTACATGTACAACCTCTCAACCAA ATAAGAACTCTGAAAAAACAAGTGGAGCTCATCAAGTCAAGAACAACCATCAATAACTGACAACTATTCTATCCCCACAG CCACAGAAGCCTTAAAAAACCAATTATATCCACAAAAGAATAAAAAAAAGCAGGGAAGTTTAAAATATTGAAAATCAAAG AGTTGGTATACCTTTGCTTCAGCTAAGACCATAACCAAATCTTGAGGTTTTTCCCTCCTAATACTTTTCTCATCAATGTC TGCAGTCTAATGGTAAGCCAAGCTAAACTGTTTCAATCATTCATCACAGTAACACTGTAACAGTAATGAATTAAAGTAAC AAGGTTCACACAACAACACATTGTGATTTGTGACATATAATAGTAATACCATTATTGTGAACTCGTATCCCATATCAGCA AGAATCTCCCTGCGAGCCTTTGAAGAAGAGCCCAGAATTATCTATTGCAAGACAACATATTCACAGATGAATTACAATAT CCAAGTGTGAGAATGCAAAAATGCATCCATTCAGAGATTCAGTTGGTTATTATTTATCAGAAGCAAAGAGAGAGATAGGA ATGCTGCTAACCTTGAACGAGGGATTTTTGGTAGCCATCTCTATTCTCTGGTTATGTGGCTGCTGCGAATGCGTGTTTTT CAAGCTCTTCGTTTGAAAGCTGCTTCCCAAACAACAGGAGGCATCAAAGGATAATAAATAAAATACAACCAAAAAAATAA AAAGGAAATTGATTATGAAACTGTAAATGAATGAACACTAATTTAAG
CDS sequence (LotjaGi1g1v0416800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTCTTCTTAGCATCATTCGGAAAATCAAAAGGAAAGAAAAGGAAATGCGAATTCTTATGGTTGGATTGGATAATTC TGGCAAAACCACTATCGTTTTGAAGATTAATGGCGAGGACACTAGTGTCATCAGTCCCACCCTTGGCTTCAACATCAAAA CCATCTCCTACCAAACTTACACTCTGAATATATGGGATGTTGGGGGCCAGAAAACAATACGATCTTACTGGAGGAACTAC TTTGAGCAAACAGATGGTTTGGTTTGGGTAGTTGACAGTTCCGATCTCAGAAGGTTGGATGACTGCAAAATGGAGCTAGA TAACCTTCTAAAGGAAGAGAGGCTATCAGGATCATCCTTACTGATACTAGCAAATAAACAGGACATTAGAGGCGCACTTA CACCTGATGAGATAGCTAAGGTGCTGAACTTGGAAGCTATGGATAAATCTCGGCACTGGAATATAGTTGGCTGTAGTGCA TACACTGGTGAGGGTCTTCTTGAGGGATTTGATTGGTTGGTCCAAGACATAGCCTCTAGAATCTACATGCTTGACTAA
Protein sequence (LotjaGi1g1v0416800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTISYQTYTLNIWDVGGQKTIRSYWRNY FEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGSSLLILANKQDIRGALTPDEIAKVLNLEAMDKSRHWNIVGCSA YTGEGLLEGFDWLVQDIASRIYMLD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 184 | 184 | 4.2E-104 | – | |
| PANTHER | 1 | 184 | 184 | 4.2E-104 | – | |
| SMART | 1 | 181 | 181 | 6.9E-51 | – | |
| SMART | 3 | 177 | 175 | 5.2E-22 | – | |
| CDD | 3 | 176 | 174 | 7.62529E-114 | – | |
| Pfam | 4 | 177 | 174 | 1.1E-69 | ||
| ProSiteProfiles | 10 | 177 | 168 | 21.956 | – | |
| SUPERFAMILY | 13 | 179 | 167 | 1.76E-50 | ||
| TIGRFAM | 15 | 150 | 136 | 3.3E-19 | ||
| SMART | 17 | 180 | 164 | 0.004 | – | |
| Gene3D | 17 | 177 | 161 | 1.7E-59 | – | |
| PRINTS | 18 | 41 | 24 | 1.8E-16 | ||
| PRINTS | 46 | 70 | 25 | 1.8E-16 | ||
| PRINTS | 73 | 98 | 26 | 1.8E-16 | ||
| PRINTS | 151 | 175 | 25 | 1.8E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi1g1v0416800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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