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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0421100 |
| Transcript ID | LotjaGi1g1v0421100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glucose-1-phosphate adenylyltransferase; TAIR: AT1G27680.1 ADPGLC-PPase large subunit; Swiss-Prot: sp|P55233|GLGL1_BETVU Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic; TrEMBL-Plants: tr|I3S8A5|I3S8A5_LOTJA Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi1g1v0421100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:91492267..91492690) extracted from Lotus japonicus Gifu genome v1.2.
ATGATGATGGGTGCTGATTACTATCAAACTGAGACGGAAATTGCATCTCTGGTGGCAGAAGGAAAGGTTCCAATTGGTGT TGGAGAAAATACCAAAATCAGGTAAGATCATTCTCTTGAACAACCATTTTGATTCGTCCTAGCTAACCTATTTCTGGTTT ATTCTAATTTCATTCTCGACCATTTTTTAAGGAATTGCATAATCGACAAGAATGCCAAGATAGGAAGAAATGTGGTTATT GCAAATACCGACGTAAGTGCTGTTTCAACTACTGCAAAATATATTGACTTCTTTGCTGATCTTGAATATATTGACTTTTC AGGGTGTTCAAGAAGCGGAAAGACCTAAGGAAGGATTCTACATCAGGTCGGGCATCACAGTTACACTGAAGAATGCAACA ATTAAAGATGGAACAGTCATTTGA
CDS sequence (LotjaGi1g1v0421100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGATGGGTGCTGATTACTATCAAACTGAGACGGAAATTGCATCTCTGGTGGCAGAAGGAAAGGTTCCAATTGGTGT TGGAGAAAATACCAAAATCAGGAATTGCATAATCGACAAGAATGCCAAGATAGGAAGAAATGTGGTTATTGCAAATACCG ACGGTGTTCAAGAAGCGGAAAGACCTAAGGAAGGATTCTACATCAGGTCGGGCATCACAGTTACACTGAAGAATGCAACA ATTAAAGATGGAACAGTCATTTGA
Protein sequence (LotjaGi1g1v0421100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMMGADYYQTETEIASLVAEGKVPIGVGENTKIRNCIIDKNAKIGRNVVIANTDGVQEAERPKEGFYIRSGITVTLKNAT IKDGTVI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 87 | 87 | 1.1E-30 | – | |
| PANTHER | 1 | 87 | 87 | 4.5E-46 | – | |
| PANTHER | 1 | 87 | 87 | 4.5E-46 | – | |
| SUPERFAMILY | 2 | 87 | 86 | 6.48E-14 | ||
| Pfam | 27 | 52 | 26 | 3.1E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0421100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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