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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0422900 |
| Transcript ID | LotjaGi1g1v0422900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BEL1-like homeodomain protein; TAIR: AT1G75430.1 BEL1-like homeodomain 11; Swiss-Prot: sp|Q1PFD1|BLH11_ARATH BEL1-like homeodomain protein 11; TrEMBL-Plants: tr|A0A1J7GB71|A0A1J7GB71_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0422900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:91696290..91699180) extracted from Lotus japonicus Gifu genome v1.2.
AAAGAACTTAATTTGTTTGCCTCTTAAGCAGTAACAGAGTTAATAGGTAAAAACAGTTCTGCTTCTGCAACCCTTGTCCT ATTTGCAACTTGTTAATAACATGTACTTTACCTTCACAAGTCAATTCTTTTAACCCCTCTCCTAATAAATCTCCTCTGTG ACTCTGATATTGGCATGTCTGCTTCAAAGTTTGGTTTGAGTTCTCATCATTTATCACATTCTGCTGCTGCAATATTCACC CCCAGGATCAATGGCTTTGGTTTTTTAAAGTGCACAGCCTTCAAACATGAAACTTGGGAGTTGATTGTGACCACTGATTC TCCTCACCAATGAATCCACTGCTCAACATCGATGCCACTCAGTACGGATTCTCCACTTCTGTGTATCATTAAGTCCTTTC TTCAGACCCAGCTTTTTACTCAAATAGTTTCTTCAGTACGTAAAAATCACTGTCCATTTCCCTTCTAAGTCCCATTTCCT CATTTCATCTTTTTTAGAAATCATAATCATATGGGGTTTATATTTCCCATCTTTCACTGTAGTGGAGAGTATAACTCACC TGCCTCAAATTTCCACTTCTCTTAGTTCATTGTTAAGTTAAGATCATACCCATTACCCAACACATAGAGGCTAAAAAAAC CATCATGTCTAACTCTATCAACCATGAGAACCAATTTGGAAGCCAAGAGCTTGTTGCTTATGGTTCTTCTTTGAGGAACA ACAACAACAACAACAGCAATGCAGCATTTGCTGACACCATGGGAGCATTTTCAAGCATTCAATCTATTGAAGGGTCTGAG ATGAGCCACACAAGGCATTTGATGGATCTTCTTGGTGCTGCAAACCAGAGCAATCACCATCACCAAACTCAAGGTCTCTC ACTTTCTTTAGGCTCTCACATGCTTGTTTCTCCTCCTCCTTCTGATGAATACAGACACCGACCGTTGAACCCTGGTCTCA TGAACCCCAACTACTTCATGCCTCAAGAGACAACCACTGACTATTTTTTCAGTGGCGGTAATGGTGGTGGTGGTGCTTTT GCTCCTTCTTCAGCCTCACTGAACCGTTCTCCTTCCACTTCTTATGGAGCAGAGTCTTTTGCTGCTGTCATTGGGAGCTC GAGGTACCTCAAACCGGCTAAGTCCCTTCTTAAAGACCTTGTTGATGTTGGTGGAAGTGTTGTTGATAGAATCAATGAAA AGCTGTTTCATGGGAGTGGAGCAGGTGCAAGAACACTTTCCTTGGAGTTAAAAGCAGAGTTGAGAAACAATGGGCATTTA TTGGCTGACAAACATGAACATCAAGTCAAGTTTGCAAAGTTAATTTCTTTATTGGATGAGGTTGGTTTTCTCTGCCAGTT TTCACTGATTTAGATACCCTTTGGAGTTTGGACTTGAAATTAATAATATTTTTCTTTGAATATCCTTCTTTGATTGATTC TATTGCCAAAATCAATTGTAGTGTGTTATTAAATTCTGACTTCTGAGAAAGAAAGAAAAAGTTAATAACATGCTATAATT TGGATACCCTTTGAACTTGAAGTTGATAATCTCTTTATTTGTTCTGCTTAATTTTCAGGTTGAAAGCAGGTATGAGAAAT ACTGCCATCAAATGGAAGAAGTGGTGTCATCTTTTGAAATGATAGCAGGTGTGGGAGCTGCCAAGTGTTACACAGCACTG GCACTTCAGGCCATGTCTAGGCACTTCTGCAGCTTAAGAGATGCCATAGTTTCACAAATAAATGTGGAGAAAAGAAAACT CTTTCAAGATTTGCCTAAAATCAATGGTGGAATATCTCAACTAAGCTTATTTGATAGAGATAATAGACATAGTAGAATGT CTCTCCAACATCTTGGTGTGATCCAAAGCCAAAGACATGTGTGGAGACCCATCAGAGGCTTGCCTGAAACCTCAGTAGCA ATCCTCCGTTCTTGGCTCTTTGAGCACTTTCTCCACCCGTATGTTACTAATCCCATGTTTATATCTTTTCTTTTTTCTCA AAATCAATTATGAAATTCAGAAACTTGACTAATGAATAGGTTGTTGTTTCCTTAATTTTCAGTCATTTCTGATTTGATAT CTGATTCTGGTTCCTGCAGTTATCCTAATGATTCTGAAAAGTTAATGCTGGCATCCCAGACTGGTTTATCTAAAAACCAA GTAAATTCCTTATCCAAAACTTCACCCTTTCCCTTCTTTTTATTTTTCACTTTCCTAGTTACAATGCTCATGTTTGTGTA TTTATTGTTGGTTCAGGTCTCAAATTGGTTCATAAATGCTCGGGTACGGCTATGGAAACCAATGATAGAAGAAATGTATA AAGAAGAGTTTGGAGATTCTTCTGAAGACTCCAACCCGCCAGTTAATAACTGCTTGGCTATGGTAGAAGCCACAGACTGT GTGGAGGATTGAGTTTGAGCTTGGTTGTATCAACTTTTTTTTTTTACTAGGAATCAATTTTGGCTTTCAAAATCTATTCT AACTTCTCCCGAAAAAATTGATTTTGACTTTAGAATCGTAGAAGAATTTCCGCATGTTCCTAATAGGCTAATGGCCCAGG AAGGGGATGATTGGTAGACAAAAATGGGCCCTGAAATTCACGGTTGCCTTTTTCTCCAAATTCAGGAGAGAATGATTATG TAATATGACAAGGTAGGCCAACATTGTTTGTTGTCTTTAGGTGAGTTCTAGTTTTTGAAAATCATGGCTAATGATGGTCT CTTTAGATAAGTCACCACTCACCAGCTTTCAGCGTTTTAACACATTTTTGAGGATTTTGCTTGTAGTCATGTCAGGTTTG CAATTGATACCTGTTTGTAGGAAAAGGCAATGGATGACAAGATCGATTTAACACAAACTGCTGTATTCAGTAACATTCGC GTATGCCAATG
CDS sequence (LotjaGi1g1v0422900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTAACTCTATCAACCATGAGAACCAATTTGGAAGCCAAGAGCTTGTTGCTTATGGTTCTTCTTTGAGGAACAACAA CAACAACAACAGCAATGCAGCATTTGCTGACACCATGGGAGCATTTTCAAGCATTCAATCTATTGAAGGGTCTGAGATGA GCCACACAAGGCATTTGATGGATCTTCTTGGTGCTGCAAACCAGAGCAATCACCATCACCAAACTCAAGGTCTCTCACTT TCTTTAGGCTCTCACATGCTTGTTTCTCCTCCTCCTTCTGATGAATACAGACACCGACCGTTGAACCCTGGTCTCATGAA CCCCAACTACTTCATGCCTCAAGAGACAACCACTGACTATTTTTTCAGTGGCGGTAATGGTGGTGGTGGTGCTTTTGCTC CTTCTTCAGCCTCACTGAACCGTTCTCCTTCCACTTCTTATGGAGCAGAGTCTTTTGCTGCTGTCATTGGGAGCTCGAGG TACCTCAAACCGGCTAAGTCCCTTCTTAAAGACCTTGTTGATGTTGGTGGAAGTGTTGTTGATAGAATCAATGAAAAGCT GTTTCATGGGAGTGGAGCAGGTGCAAGAACACTTTCCTTGGAGTTAAAAGCAGAGTTGAGAAACAATGGGCATTTATTGG CTGACAAACATGAACATCAAGTCAAGTTTGCAAAGTTAATTTCTTTATTGGATGAGGTTGAAAGCAGGTATGAGAAATAC TGCCATCAAATGGAAGAAGTGGTGTCATCTTTTGAAATGATAGCAGGTGTGGGAGCTGCCAAGTGTTACACAGCACTGGC ACTTCAGGCCATGTCTAGGCACTTCTGCAGCTTAAGAGATGCCATAGTTTCACAAATAAATGTGGAGAAAAGAAAACTCT TTCAAGATTTGCCTAAAATCAATGGTGGAATATCTCAACTAAGCTTATTTGATAGAGATAATAGACATAGTAGAATGTCT CTCCAACATCTTGGTGTGATCCAAAGCCAAAGACATGTGTGGAGACCCATCAGAGGCTTGCCTGAAACCTCAGTAGCAAT CCTCCGTTCTTGGCTCTTTGAGCACTTTCTCCACCCTTATCCTAATGATTCTGAAAAGTTAATGCTGGCATCCCAGACTG GTTTATCTAAAAACCAAGTCTCAAATTGGTTCATAAATGCTCGGGTACGGCTATGGAAACCAATGATAGAAGAAATGTAT AAAGAAGAGTTTGGAGATTCTTCTGAAGACTCCAACCCGCCAGTTAATAACTGCTTGGCTATGGTAGAAGCCACAGACTG TGTGGAGGATTGA
Protein sequence (LotjaGi1g1v0422900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSNSINHENQFGSQELVAYGSSLRNNNNNNSNAAFADTMGAFSSIQSIEGSEMSHTRHLMDLLGAANQSNHHHQTQGLSL SLGSHMLVSPPPSDEYRHRPLNPGLMNPNYFMPQETTTDYFFSGGNGGGGAFAPSSASLNRSPSTSYGAESFAAVIGSSR YLKPAKSLLKDLVDVGGSVVDRINEKLFHGSGAGARTLSLELKAELRNNGHLLADKHEHQVKFAKLISLLDEVESRYEKY CHQMEEVVSSFEMIAGVGAAKCYTALALQAMSRHFCSLRDAIVSQINVEKRKLFQDLPKINGGISQLSLFDRDNRHSRMS LQHLGVIQSQRHVWRPIRGLPETSVAILRSWLFEHFLHPYPNDSEKLMLASQTGLSKNQVSNWFINARVRLWKPMIEEMY KEEFGDSSEDSNPPVNNCLAMVEATDCVED
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 35 | 423 | 389 | 1.6E-147 | – | |
| PANTHER | 35 | 423 | 389 | 1.6E-147 | – | |
| SMART | 150 | 284 | 135 | 2.7E-31 | ||
| Pfam | 155 | 283 | 129 | 6.5E-39 | ||
| Gene3D | 332 | 409 | 78 | 2.4E-27 | – | |
| SMART | 334 | 398 | 65 | 1.5E-9 | ||
| CDD | 334 | 395 | 62 | 1.73112E-12 | ||
| SUPERFAMILY | 340 | 402 | 63 | 1.15E-17 | ||
| Pfam | 351 | 390 | 40 | 5.9E-17 | ||
| ProSiteProfiles | 353 | 394 | 42 | 11.855 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi1g1v0422900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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