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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0423300 |
| Transcript ID | LotjaGi1g1v0423300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-galactosidase; TAIR: AT4G36360.1 beta-galactosidase 3; Swiss-Prot: sp|Q9SCV9|BGAL3_ARATH Beta-galactosidase 3; TrEMBL-Plants: tr|A0A151TC90|A0A151TC90_CAJCA Beta-galactosidase; Found in the gene: LotjaGi1g1v0423300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:91751546..91756226) extracted from Lotus japonicus Gifu genome v1.2.
ATGGACACCAATTCAGTTTCAAAGCTGCTACTAGTGTTGTTACTCACGGTCTTGTTTGCGGGTTTTGAGCTGATTCACTG CAATGTGAGCTATGATAGGAAGGCCCTTCTCATCAATGGCCAAAGGAGAGTCCTAATCTCTGGTTCCATTCACTATCCCA GAAGCACCCCTGAGGTATGGTTAACTTTTTCTTCACTCCCCTTAAGTTTGTGTTTTCAGCTTCTAATTGAGTGTGTTAGT TTCAATTGTGTGATTTCTGTAACATGTAGATGTGGGAGGATCTAATTCAGAAAGCCAAACATGGAGGAATTGATGTCATA GACACTTATGTCTTCTGGGATGTCCATGAACCCTCACCTGGCAATGTACTACTCTGGATCTTATAAAAATTGCATTTTTT TAGGGTTGCTTTGTTATTTTTTCTGATGTTACTATGTTAGTTTGCAGTACAATTTTGAAGGAAGATATGATCTAGTTAGG TTCATTAAGACAGTGCAAAAGTTGGGGCTTTATGCCAATCTTCGCATTGGACCTTATGTATGCGCTGAGTGGAATTTCGG GTACGAACACCTTCCATATTTCTATGTGTTTTTTGTGTATGGGATTATTGTGATTCACAATTATATTCTTTAATGGTGTA GAGGGATTCCCGTTTGGTTGAAGTATGTTCCTGGCATAAGCTTCAGAACAGATAATGGGCCTTTCAAGGTTGAACTTTAA TTTCAAATTAACATGGTTTATCTCTGTTGATGAATCTAGTATTGCATGCTCTGATGTTGCTGTTTTGTTTTTATTTAGGA TGCAATGCAGGGTTTTACCAAGAAAATTGTCCAGATGATGAAGAGTGAAAAGTTGTTTCAGTCTCAGGGTGGTCCAATCA TTCTTTCACAGGTATGCAGTCCCTTTGTATATATGGCATATTCATACCAATAAGTTACTATTTCAAGATGAAAATTTAAA TATTTTATTTTCTCTTCCTCTACTTGCTTTTTACAGATTGAGAATGAGTATGGACCGGAGAGTGGGGCGCTAGGAGGTGC TGGTCACGCGTACATAAATTGGGCTGCTAAGATGGCTGTTGGATTGGATACAGGAGTCCCCTGGGTTATGTGCAAGGAAA CTGATGCCCCAGATCCTGTGGTGAGCCTTTTCATTCTCTTGGTTAAATCATTTTCTTCAGTTGATCATGAATAGGTTTTA TTTGGTCTGAAGCCCTTTCATCAGTATCACCGAAGAAATTAGGTCTTTCTTTATGTTCACCTACATTCTATTTTTATTGA GGTTTGAGTATGATGCATTCAATTCTCTGCATCAGATAAATTCGTGTAATGGCTTTTACTGTGATGATTTCTCTCCAAAT AAACCATACAAGCCTAGCATATGGACTGAGTCCTGGAGTGGCTGGTAAGCCATACATTGTATTATATTTGAAGTTGGTTC TGTAACTCTAGAGTCTAGAGACACTGTTGTCTAATTTCCTTACCCTTATGTTCTCCTGGTCTCTTTTTTCCATTCCCCAT GATCATAAGGTTTACAGAATTTGGTGGCCCAGTTCACCAGCGACCAGTTGAGGATCTAGCATTTGCAGTTGCTCGATTCA TACAAAAGGGAGGAACTTTTGTGAATTATTACATGGTGGGTCACCTTCTATGATTTATCTTTCAGTTTTACTCTAAATAA CCTCATCTAGTGGTATAAAGCTAGGTTGTTCTTGTTGTTGTGACAAAACTTTCCTTGCTTTGCTTTTCAATCTCACTTGT GTGATTGATGACAAATGATAGTATCATGGAGGAACTAACTTTGGACGATCAGCTGGAGGCCCATTCATCACTGCAAGCTA TGACTATGATGCTCCAATTGATGAATATGGTGAGACAGTCGTGCTTATAATGAGAAGATTCTTTGATTATTTTGTTTGCT CCATGATTCATTTAACATATAACTGAATAGTATATAGATATAATTTACTGAGCCTATGAATGTATCACCATTCTGTTATA ATATACACATGACCCTCAAGTAAAATTGATTGTTTGTGTTTTGGTATTTCCTTCTCTGATACATGGCATATGCATGACTT CGTACTGGACTTTGTTTCCATCTGTGTGGCTTCAAAGATAGTTTGATGTTATATTCTGTACCATTTCTATTCCATCCTGA CCCACATGAGCATGTTGAAATTGAGCACTTCTCTGTTTTTAGGTTTGATTAGGCAACCAAAATATAGTCATTTGAAGGAT CTTCACGAAGCTATCAAGCGATGTGAGCATGCGTTGGTTTCTTCAGACCCTACTATTACATCATTAGGAACATTTCAGCA GGTAACTCGTCTCTCATATGAAGCAATTTTCCAATTCTAGTTATGTGCATGTTTATGATAAACTAGTCTTAGTTCTGACA ATTACCCTCCTCTCTCTGTATGCTCGGCGATTTTCCAGGCTCATGTATTCTCGTCAAAAACTGGAGGTTGTGCAGCATTT CTTGCAAACTATCACGCACAGTCTGCTGCAAGAGTGACGTTCTATAACAGGAAATATGACTTGCCTCCTTGGTCCATAAG CATCCTTCCTGACTGCAAAGCGGATGTTTTTAATACTGCAAAAGTAAGAATATTTCAGGGGACCTTTTATACGATGTCAA TCACATGCGATGGAAACTACCTTTTGTCATCAGTTTTTATTTCTTATCAGCATTGTCCATTGCATCAAGTAATTGATGGG ATTGCTATGTCTTCTTGAAGGTGAGAGTTCGAACTTCAAAGGTTCAAATGATTCCTGTCAATTTGAAGTTGTTCTCATGG GAGACCTATGATGAAGATCTCTCTTCTCTGGCTGAAAGTTCAAGGATTACAGCTCCTGGACTCTTAGAACAGCTGAATGT TACCAGGGACTCCAGTGACTATCTTTGGTACATAACAAGGTAAGTTGCGCGGTATTAAGCTTATTTTCTAGAGTTTCAAA CAACTATAACTGAACTAAAATTCTTTTGGTTTGTCTGTATAATTGCAAAGTCACAAAACAATAAATCCCCTATCATAATA GTATGCAGATTCAGTGAGATGAAATTACCTTGTTTTAGTTTTCAAGAAGTTCCTGAACAAGTGAACATGTCCATTTGTGA CACATCTTTCAGATTTGAATTCTTTGTCAGATAGATTCTGCTATCCTACTTCCTCAGTTCTTAGTATCTAAAATCTTACT GTTTTATTGTTGGTATTCTGCAGTGTTGACATAAGTTCATCAGAATCGTTTCTTGGAGGAGGACACCAACCAAGCATTAA TGTGCAGTCCGCAGGACATGGTATCCACGTGTTTGTTAATGGACAGTATTCAGGTTTGTAGAATTCAGTTAGACATGGTA GTTCTTTTGCTTGCATATTGATTGATTTCTAGTTAAACAAAGATGAAAATTCTCTTTCACAGGGTCGGCTTTTGGGGCAA AGGAACAAAGAAGTTGCAAGTTTAATGGGCCAGTCAGCCTACATGCTGGAACAAATAAAATTGCACTTCTCAGCGTTACA GTTGGATTACAGGTTCGTACTTAGTACCTTGAACTTGATCATTCGGTTGCATTGATTCAAGTGTTTCAATTTGCACGACA AGATGTTACTATCACTGATCGGCTTTGCTCTTTCATTTTTCCATTTTGCACTCGAAGAATGTTGGCCGGCATTATGAAAC ATGGAAGACAGGAATCAGTGGTCCAGTTTTGCTCCAGGGTCTTGACCACGGACAGAAAGATTTGACGAGTAATAGATGGT CATATCAGGTCCGATGCACCCAGAAAAGCAACACAAATTTAGTTTATGTATTCATAAGCTTCAATTATTGTGTGGCTTAC AATATGTTCTCCAACAGGTTGGCCTAAAAGGAGAGGCTATGAATTTGGTGTCTCCCAATGGGGCTTCATCTGTTGATTGG ATCCAAGAGTCACTAGCCACCCAAAGCCGGTCACAATTGAAATGGCACAAGGTAAGAAAAATTACTGGCTGATGACAATA TTTGCTGTAGTCTTCAACTAGAAGCTTACCATGAACATCAAACCTCCAGGCTTATTTTAACACCCCCGAGGGAAATGAAC CGTTGGCATTGGACCTGGGAAGTATGGGGAAGGGTCAAGTGTGGATCAATGGACAGAGCATAGGAAGATATTGGCTGGCT TATGCAAAGGGTGACTGTAATTCTTGCAGCTATTCTGGGACATTCCGGCCAGTAAAGTGCCAACTTGGATGTGGACAACC TACTCAACGATGGTACAGTTTCTCTGTAGAAAATATAGCTTCAACCTTGCTTCTTTATGTCTTTAGGAAAATGTTGAGAT CACTGTCATGTTATCTTGTATATATATATATTCCTTTGGTTGTGTTGGTATTGTTACTCTCTTGGTATACATGAGTAATG AACTAATGATAGTTGTCCTTTTTTGGTACAATGTGTCAGATGCAATGCCACTAGATCTATATCTTCATCTATATGAGAGT CCAATGGTGGGAGAATAGACTGATTTACCTGTTTTCTCTTTGCAATTTCGCAGGTATCACGTTCCAAGGTCCTGGCTAAA GCCAACAAAGAACTTGATAGTAGTGTTTGAAGAATTAGGCGGAAATCCTTGGAAGATATCTTTAGTAAAGAGAATGGTAC ATACTGCAAGAGTTCACAGTGAACCTGATTCAGAGAACTAA
CDS sequence (LotjaGi1g1v0423300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACACCAATTCAGTTTCAAAGCTGCTACTAGTGTTGTTACTCACGGTCTTGTTTGCGGGTTTTGAGCTGATTCACTG CAATGTGAGCTATGATAGGAAGGCCCTTCTCATCAATGGCCAAAGGAGAGTCCTAATCTCTGGTTCCATTCACTATCCCA GAAGCACCCCTGAGATGTGGGAGGATCTAATTCAGAAAGCCAAACATGGAGGAATTGATGTCATAGACACTTATGTCTTC TGGGATGTCCATGAACCCTCACCTGGCAATTACAATTTTGAAGGAAGATATGATCTAGTTAGGTTCATTAAGACAGTGCA AAAGTTGGGGCTTTATGCCAATCTTCGCATTGGACCTTATGTATGCGCTGAGTGGAATTTCGGAGGGATTCCCGTTTGGT TGAAGTATGTTCCTGGCATAAGCTTCAGAACAGATAATGGGCCTTTCAAGGATGCAATGCAGGGTTTTACCAAGAAAATT GTCCAGATGATGAAGAGTGAAAAGTTGTTTCAGTCTCAGGGTGGTCCAATCATTCTTTCACAGATTGAGAATGAGTATGG ACCGGAGAGTGGGGCGCTAGGAGGTGCTGGTCACGCGTACATAAATTGGGCTGCTAAGATGGCTGTTGGATTGGATACAG GAGTCCCCTGGGTTATGTGCAAGGAAACTGATGCCCCAGATCCTGTGATAAATTCGTGTAATGGCTTTTACTGTGATGAT TTCTCTCCAAATAAACCATACAAGCCTAGCATATGGACTGAGTCCTGGAGTGGCTGGTTTACAGAATTTGGTGGCCCAGT TCACCAGCGACCAGTTGAGGATCTAGCATTTGCAGTTGCTCGATTCATACAAAAGGGAGGAACTTTTGTGAATTATTACA TGTATCATGGAGGAACTAACTTTGGACGATCAGCTGGAGGCCCATTCATCACTGCAAGCTATGACTATGATGCTCCAATT GATGAATATGGTGAGACAAGGCAACCAAAATATAGTCATTTGAAGGATCTTCACGAAGCTATCAAGCGATGTGAGCATGC GTTGGTTTCTTCAGACCCTACTATTACATCATTAGGAACATTTCAGCAGGCTCATGTATTCTCGTCAAAAACTGGAGGTT GTGCAGCATTTCTTGCAAACTATCACGCACAGTCTGCTGCAAGAGTGACGTTCTATAACAGGAAATATGACTTGCCTCCT TGGTCCATAAGCATCCTTCCTGACTGCAAAGCGGATGTTTTTAATACTGCAAAAGTGAGAGTTCGAACTTCAAAGGTTCA AATGATTCCTGTCAATTTGAAGTTGTTCTCATGGGAGACCTATGATGAAGATCTCTCTTCTCTGGCTGAAAGTTCAAGGA TTACAGCTCCTGGACTCTTAGAACAGCTGAATGTTACCAGGGACTCCAGTGACTATCTTTGGTACATAACAAGTGTTGAC ATAAGTTCATCAGAATCGTTTCTTGGAGGAGGACACCAACCAAGCATTAATGTGCAGTCCGCAGGACATGGTATCCACGT GTTTGTTAATGGACAGTATTCAGGTTTGTAG
Protein sequence (LotjaGi1g1v0423300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDTNSVSKLLLVLLLTVLFAGFELIHCNVSYDRKALLINGQRRVLISGSIHYPRSTPEMWEDLIQKAKHGGIDVIDTYVF WDVHEPSPGNYNFEGRYDLVRFIKTVQKLGLYANLRIGPYVCAEWNFGGIPVWLKYVPGISFRTDNGPFKDAMQGFTKKI VQMMKSEKLFQSQGGPIILSQIENEYGPESGALGGAGHAYINWAAKMAVGLDTGVPWVMCKETDAPDPVINSCNGFYCDD FSPNKPYKPSIWTESWSGWFTEFGGPVHQRPVEDLAFAVARFIQKGGTFVNYYMYHGGTNFGRSAGGPFITASYDYDAPI DEYGETRQPKYSHLKDLHEAIKRCEHALVSSDPTITSLGTFQQAHVFSSKTGGCAAFLANYHAQSAARVTFYNRKYDLPP WSISILPDCKADVFNTAKVRVRTSKVQMIPVNLKLFSWETYDEDLSSLAESSRITAPGLLEQLNVTRDSSDYLWYITSVD ISSSESFLGGGHQPSINVQSAGHGIHVFVNGQYSGL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 27 | 27 | - | – | |
| Phobius | 1 | 8 | 8 | - | – | |
| PANTHER | 9 | 515 | 507 | 0.0 | – | |
| Phobius | 9 | 20 | 12 | - | – | |
| TMHMM | 9 | 31 | 23 | - | – | |
| PANTHER | 9 | 515 | 507 | 0.0 | ||
| Phobius | 21 | 27 | 7 | - | – | |
| Gene3D | 25 | 344 | 320 | 1.6E-110 | – | |
| SUPERFAMILY | 28 | 344 | 317 | 1.94E-106 | ||
| Phobius | 28 | 516 | 489 | - | – | |
| Pfam | 36 | 340 | 305 | 6.1E-118 | ||
| PRINTS | 39 | 56 | 18 | 7.0E-69 | ||
| PRINTS | 60 | 78 | 19 | 7.0E-69 | ||
| PRINTS | 115 | 134 | 20 | 7.0E-69 | ||
| PRINTS | 172 | 187 | 16 | 7.0E-69 | ||
| ProSitePatterns | 174 | 186 | 13 | - | ||
| PRINTS | 251 | 266 | 16 | 7.0E-69 | ||
| PRINTS | 288 | 303 | 16 | 7.0E-69 | ||
| PRINTS | 308 | 324 | 17 | 7.0E-69 | ||
| Pfam | 348 | 419 | 72 | 3.1E-27 | ||
| PRINTS | 387 | 401 | 15 | 7.0E-69 | ||
| SUPERFAMILY | 403 | 515 | 113 | 1.45E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi1g1v0423300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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