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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0423700 |
| Transcript ID | LotjaGi1g1v0423700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Purple acid phosphatase; TAIR: AT2G16430.2 purple acid phosphatase 10; Swiss-Prot: sp|Q9SDZ9|PPAF2_IPOBA Purple acid phosphatase 2; TrEMBL-Plants: tr|K7KSQ8|K7KSQ8_SOYBN Purple acid phosphatase; Found in the gene: LotjaGi1g1v0423700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:91771589..91774100) extracted from Lotus japonicus Gifu genome v1.2.
ATTGGAATCAACAGAAAAGAGATGGGATTCATCTGGCATGGCTATGCTCTTCTTCTACTTCCAGCCTTGGTTTTTATTAG TGAGATATGTTTCTGCATGGGTGGAAAAACCAGCACTTTTCTTAGAAATGATTATTTATCGTTGGACATGCCATTAAACA GTGACGTGTTTCGTGTGCCTCCTGGTTACAATGCTCCTCAGCAGGTATTATAGAGAGAGGATAAGTAACCAAGTTCAATC TGTCTACACTTTATATATGCTGCTTTTCTCAGCTGTTGTTAGAATTTGTTTCCTAATTTCTGTTAAGGATGTGGGTTTGG AAAGGTGCACATAACACAAGGAGATCATGTGGGGAAGGCTGTGATCATCTCTTGGATTACCCCTGATGAACCTGGTTCAA GTACCGTGATTTATTGGGCCGAAAACAGTAGTGATTTCAAGTGGCAAGCTGATGGGTTTTTCCTTACCTACAAATACTTC AACTACACCTCTGGTTACATTCATCACTGCACTATTCAGAATTTGGAGGTGCTGTGGAGCACTTTCCCTCAGTCTCACTT TTTAAATTACCAGCTATTTTGGTAACAAATTATCTTAACCTGTTCTCAATTCAAATGCACAGTTTGACACCAAATACTAC TATGAGGTTGGAATAGGGAATACCACTCGCCAGTTCTGGTTCAAAACTCCTCCCACTGTTGGCCCAGATGTTCCTTACAC ATTTGGTCTAATTGGTAATTAGCTCTTTCTCCTGCAATGAATTTTGTTATCTACTTCTTTGCTTAACCAACCTGACATGT TGTGGCAGTCAAATATGTTAATTTGATGTGACTAATTGACTTGTTGTATGTTTGGATTAGCTTCCTTTTCCTCATAGTGC CCCCGTTACTAGAAGTTACTCACATAAGCTTCAATCTAGAATTGATTTTGGCTTTAAAATTTCCAAACATACACTATTTT CCTTACTCATTTGGTCTAATGTAGTCTAGTATTCCTTGAGATAGCAAGATCATGAAACTGCACTAGTTTACAGAAATTGA ATTTTTTTGTCAGATATATAGGAATCTTACCCTTTCAGCCATATTATCAATTAGCAGGGGATCTAGGCCAAACTTATAAT TCCAACACCACTCTTACCCATTATGAACTAAGCCCAGTGAAAGGCCAGACAATACTGTATGTAGGGGATCTCTCTTATGC AGATGACCATCCATTTCATGACAACAACAGATGGGATACTTGGGGAAGATTCATTGAGAGAGTTGCTGCCTATCAGCCTT GGATATGGACTGCAGGGAATCATGAACTTGATTTTGCTCCAGAACTTGTATGTCTTAAATACTTGAGCACTTTATAAGTT GTGTTAAATTGGAGTTTCCATTACTTGTTATTGGAATTGCTTTATTTATATAGAAGGTTTCTTTTTGTGATGTTTATACA CTTTAGTTTTGTGCTAGAACTTCTACTTTTTATGCAAAAGCTTCAATAATTTTATTTAAAACAAGGGTTTTTATACTGCA GGGTGAAACTAGACCATTCAAGCCTTACACTTCTCGTTACCATGTACCCTACAAAGCATCAAATAGTACATCTCCATTGT GGTACTCTATCAAGAGAGCTTCAGCATACGTCATTGTTATGTCTTCTTACTCAGCATATGGTACTATTTTTCGTTTTGTT TTTCAAAACTTGCTAGTATCTTTTACATATGTGAGTTGTGCAGTGAGATATCTATTAACTGATATTTAATCAGTTTCTTG TTTTTTGTTAGATAGCCAACTTATGGTTAAGTCTGGTTATGTCAGTTATGTTATTCAAAGTTAGTTGCCCTCTTGATTTG TGAAGATGCAGATTTTCATTTTTCTTTTTCCTCAAAGGTAAATACACTCCTCAGTATAAATGGCTTGAGAAGGAGCTGCC CAAGGTGAACAGGACAGAGACACCATGGCTTATAGTTCTCATTCATTGTCCAATATATAATAGTTACAAGGCTCACTATA TGGAAGGGGAGACGGTTAGAGTAATGTATGAGAAGTGGTTTGTGGAGTATAAAGTTGATGTTGTATTTTCTGGTCATGTC CATGCTTATGAAAGATCTGTAAGTTATCACTTCCTCATTGTCCTTTACATTTTATTTGTTATATCCCAAGCACTTGTATT CACTGAATCTACGGGATCTTTGTGAAAATATAGTGGTTCTTTTATTCTTAATATTGAATCATGTTTTCCATTCAATTTTA GGACTCTATAAGCTACTGAAGTGAAAAGTCTTGTGCAGGAACGTGTATCAAACATTGGATATAATATTGTAAATGGAATT TGCTTACCCATCAATGACCAATCTGCCCCAGTTTACATAACGATTGGAGATGGAGGAAATTTAGAAGGATTGGCAACTGC GTGAGTATATTAGCTAGCTGTAAAATTGATCTCTATGACTTTATTTTCTTGCTGTTACTTGTTCAAACTGCATAGTGTTA TTATTATGTTGTGTTTCAATGCTGCAGTATGA
CDS sequence (LotjaGi1g1v0423700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGATTCATCTGGCATGGCTATGCTCTTCTTCTACTTCCAGCCTTGGTTTTTATTAGTGAGATATGTTTCTGCATGGG TGGAAAAACCAGCACTTTTCTTAGAAATGATTATTTATCGTTGGACATGCCATTAAACAGTGACGTGTTTCGTGTGCCTC CTGGTTACAATGCTCCTCAGCAGGTGCACATAACACAAGGAGATCATGTGGGGAAGGCTGTGATCATCTCTTGGATTACC CCTGATGAACCTGGTTCAAGTACCGTGATTTATTGGGCCGAAAACAGTAGTGATTTCAAGTGGCAAGCTGATGGGTTTTT CCTTACCTACAAATACTTCAACTACACCTCTGGTTACATTCATCACTGCACTATTCAGAATTTGGAGTTTGACACCAAAT ACTACTATGAGGTTGGAATAGGGAATACCACTCGCCAGTTCTGGTTCAAAACTCCTCCCACTGTTGGCCCAGATGTTCCT TACACATTTGGTCTAATTGGGGATCTAGGCCAAACTTATAATTCCAACACCACTCTTACCCATTATGAACTAAGCCCAGT GAAAGGCCAGACAATACTGTATGTAGGGGATCTCTCTTATGCAGATGACCATCCATTTCATGACAACAACAGATGGGATA CTTGGGGAAGATTCATTGAGAGAGTTGCTGCCTATCAGCCTTGGATATGGACTGCAGGGAATCATGAACTTGATTTTGCT CCAGAACTTGGTGAAACTAGACCATTCAAGCCTTACACTTCTCGTTACCATGTACCCTACAAAGCATCAAATAGTACATC TCCATTGTGGTACTCTATCAAGAGAGCTTCAGCATACGTCATTGTTATGTCTTCTTACTCAGCATATGGTAAATACACTC CTCAGTATAAATGGCTTGAGAAGGAGCTGCCCAAGGTGAACAGGACAGAGACACCATGGCTTATAGTTCTCATTCATTGT CCAATATATAATAGTTACAAGGCTCACTATATGGAAGGGGAGACGGTTAGAGTAATGTATGAGAAGTGGTTTGTGGAGTA TAAAGTTGATGTTGTATTTTCTGGTCATGTCCATGCTTATGAAAGATCTGAACGTGTATCAAACATTGGATATAATATTG TAAATGGAATTTGCTTACCCATCAATGACCAATCTGCCCCAGTTTACATAACGATTGGAGATGGAGGAAATTTAGAAGGA TTGGCAACTGCTATGTTGTGTTTCAATGCTGCAGTATGA
Protein sequence (LotjaGi1g1v0423700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGFIWHGYALLLLPALVFISEICFCMGGKTSTFLRNDYLSLDMPLNSDVFRVPPGYNAPQQVHITQGDHVGKAVIISWIT PDEPGSSTVIYWAENSSDFKWQADGFFLTYKYFNYTSGYIHHCTIQNLEFDTKYYYEVGIGNTTRQFWFKTPPTVGPDVP YTFGLIGDLGQTYNSNTTLTHYELSPVKGQTILYVGDLSYADDHPFHDNNRWDTWGRFIERVAAYQPWIWTAGNHELDFA PELGETRPFKPYTSRYHVPYKASNSTSPLWYSIKRASAYVIVMSSYSAYGKYTPQYKWLEKELPKVNRTETPWLIVLIHC PIYNSYKAHYMEGETVRVMYEKWFVEYKVDVVFSGHVHAYERSERVSNIGYNIVNGICLPINDQSAPVYITIGDGGNLEG LATAMLCFNAAV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 8 | 8 | - | – | |
| Phobius | 1 | 27 | 27 | - | – | |
| SignalP_EUK | 1 | 27 | 27 | - | – | |
| TMHMM | 2 | 24 | 23 | - | – | |
| Phobius | 9 | 19 | 11 | - | – | |
| PANTHER | 12 | 406 | 395 | 4.6E-243 | – | |
| PANTHER | 12 | 406 | 395 | 4.6E-243 | ||
| Phobius | 20 | 27 | 8 | - | – | |
| Phobius | 28 | 412 | 385 | - | – | |
| SUPERFAMILY | 38 | 153 | 116 | 3.14E-39 | ||
| Gene3D | 58 | 155 | 98 | 1.5E-39 | ||
| Pfam | 59 | 151 | 93 | 3.1E-19 | ||
| Gene3D | 156 | 410 | 255 | 4.0E-99 | ||
| CDD | 157 | 405 | 249 | 3.97816E-89 | ||
| SUPERFAMILY | 158 | 402 | 245 | 3.64E-46 | – | |
| Pfam | 162 | 360 | 199 | 2.3E-24 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Acid phosphatase activity | Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum. | ||
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi1g1v0423700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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