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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0424000 |
| Transcript ID | LotjaGi1g1v0424000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptide transporter; TAIR: AT5G01180.1 peptide transporter 5; Swiss-Prot: sp|Q9LFB8|PTR5_ARATH Protein NRT1/ PTR FAMILY 8.2; TrEMBL-Plants: tr|A0A072V2Y9|A0A072V2Y9_MEDTR Peptide transporter; Found in the gene: LotjaGi1g1v0424000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:91830707..91834509) extracted from Lotus japonicus Gifu genome v1.2.
ATTTGTAACCAATAAAATGCAGCTTCTGCCGTCTGCATATGTCACTTATTTTACAGCCACAAAATCACTAAACAAAACAG TCAAACAGACAAGACTGAGATAGAGATGCCTATATACTCTGTTAACATAAAAATGCAAAAAGGTGTTACTTTCCCTCTCA CAAAACGAATCTCTTAACCTTAGCCCTTCAATTCATGGAGAATCCTTCCAGCAAACTACATATCAAGGCAAGTAAAAAAA AACACTTAAATTGAACTATCATATGTCATTTTACTGAGTTCTATAGGTAGTATGCATTTTTAATATTTTTCAAACAGGAG GAGATGGAATTAAGTACCTTGGTTAGCAATGGTCGCTTGGATCTGCATGGTAGGATTGCTGACAAACAAACAACTGGAGG ATGGAAGGCATCGCCCTTTATCATAGGTACGTGATTATGCTTATGCATTTGAATGTGAGTAAAAGTGCTTTTTTGTGGTT TACCAATTACCAAACAAACACTAACTTATGCTCTGTGTGCCCCTGCAGTGAACGAAGTGACAGAGAGGTTGGCATTCTTT TCAATTGCAGTGAACATGGTGGCTTACTTGTTTTCCGAAATGCATCAATCACTTCCGGATGCTGCTACCCATGTCACGGA TTGGATTGGAGCTGCCTATGTCCTCACCCTTCTAGGAGCCTTTCTAGCAGATGCTTACTTGGGTCGCTTCAGAACCATCC TTATTTTCTCTGCTGTCTATGCTGCGGTAAATTTCTTTTTGTTATCTGTTTCATAAATCTCCCACTATTTGATCACAAAA ACGAACTGATTGTCAACCATGGTTTCAACTTGCAACTATACGTTTTGTTGAAAATAGAAGACCCACATCGTGATTTAGAA ATAAAATCCTTAGCGTATATAATTCCAAGAATCTTAAGGACGTGGGACTTTTACTCTTAAAGACTTTTGATCAATCATAT TCACAGCGATGTGGGACTTGGGCCTGCACTCCAACAAGTTTACTAGTTTCATTTATTAATACAAACATATTCAATAAACA ATGTCTGCAATACTATTATACTAATATATAGATTCTTGGTTGATTTTGAAAATTTCCATATGTTTTGGAACAAACATTGC ATATGCAGTTATTATTTGTATCGTGAAGAAGAAACCAAGTTGCCATTCATGACAACTATCATGCCTTCATCATGTTTATG CTGTTATAGAGTTTTTCGTTTTCCTCTTTCTCTGTTGGATTCCAAAGATGATACAGTCATACAGAAATATAGTGTTTTAT TTAAGCATATCTGAAAAAGATTAAAAAATGAAAAGAAATAAAGAAGCAACAAATGAGAAGGTATGAAATCCACCAGGGTT AACTCTCTTAAGTCCCACATTGGTTATGCTTCTCTCATCTTCTTTCTCCTTCTCTTATATAAAGAATGCAACTTCTCACA TTCAATCCATCCAAGTTGCTTAGTTGTATCAAATATGAAGATGCAATAACCTAAATTGTGAAATATTAGCTTATTGCATT TCATCTTTGATACATTTCTTGCATACTTGATTATTACACAGTAGAAATTTCTTGCATACTTGATATTAGAAATTACAGAC TCTAGGTGCTAGTATGTGAATCAACATGCATACATCTTTATCTGTATTCAAGGTCTTGGAGAGAGAACAAAAAGAAATCA AAAGAAAAGAAATCAAAAGATCCTATAAATCATAAGAGTTTGATGTTACTTTAACTTGTGAACTCTGCAGGGGATGATTT TGCTGACAGTTTCAGCTTCTCTAGACAGCTTACGCCCGGATAAATGCATTGTGAAACCATGTAAACAAGCAAGCCAAGGC CAAACAGCATTCCTGTACGGAGCACTTGCCCTGATTGCTTTAGGTACTGGTGGAATCAAGCCTTGTGTGTCCTCGTTTGG AGCAGACCAATTCGATGAGGGAGATGAGAAAGAAGTCCAAAAGAAATTCGCTTTCTTCAACTGGTTCTTCTTCGCCATCA ACATGGGTGCCCTCCTTGGAATAACCGTTCTAGTTTACACCCAAGAGAAATTAGGCTGGGGTTGGGGTTTTGGAATACCC ACAGGTGCCACATTTGCCTCTATCATTGTCCTACTAGCTGGTGTCCGGTATTACCGTTATCAAAAGCCAATGGGAAGCCC TTTCACCAGGTTCCTTCAAGTTATAGTAGCCTCCATTAGAAATCACCAAAGAGGAATCTCAGTAGGATCAGAAACTCCTC TCTATGAGGTCCAAACCACGCAGTCCGATATAATTGGCGCTCGCAAGCTTCCTCACACTCCACAATACAGGTTAGTTAGT AGTTGATCATCTAAGAACCCAGTGTTTTAAATTGCCGTCCGCAACCACAATTGCAGCCTGCAATGATATCATCACCGCCG CAATTGTGGCTGTTTCAACCCAAATTTATCTGTTACATTCCACAAAGCAGCATCAATTTTAAACCCTGACTCATACATAT TAAAATTTTGTGCGAGTTGGGGGCATGTTTAGTTTCAATTCTAAATGCAGTAACAACGTGGATACATCTTTTCAAAAGTA ACTATTTGTCGCCTCAATTTGACATCAATCCCTACTAATTTTGTCGCCTAATTTGACGTGAATCCGTACTAAACGTGTAT TCACTTGTATTTTTCAAACACACACTAAACAATATCAAATAATTTTGCAGGTTTTTTGATAAAGCAGCAGTGGTGATCAC AGAAGGGGAAACTCACACTCACAGAAGCAACCGCTGGCGCATATGCACAGTGACACAGGTGGAGGAGTTGAAATCCTTCA TCAGAGTCCTTCCGGTGTGGGCTTCCACCATCGCCCTCTCCGTTTCCTTCGCTCAGCTCTCAACCTTCTTCATAAGCCAA GCCAACATCACAGACCGAAGACTCGGAGACAGCTTCAAAATCCCCGCCGGCTCCGTACCGGTGTTCAGCGCCGTCAACGC CCTCCTCCTCGTCCCCCTCTACGAGAAATTCATCGTCCCATTCCTCCGCAACCGCTACGGCCACCCGCGCGGAATAACGT CACTGCAGCGAATGGGCGTCGGACTCTTCATCTCCATCTTCGCCATGGCTTCGGCGGCGCTGGTGGAGAAGAAAAGACGT GAACACTACGCGCAGCCGTTCAGCATGAGCGTGTTCTGGTTGCTGCCGCAATTCTTTCTGATGGGGAGTGCAGAGGTGTT CACTTACGTGGGGCAGTTGGAGTTTTTCTATGATGAGGCGACGGATGGGACGAGGAGTATTAGTAGTGCGATGTTTCTGG CGGAGATTGGGATCGGAAGCTGGCTGAGCACGGCGTTGGTGAAGATTGTTGAAGGTGCTAGTGGTGGACAGCAGAGAGGG TGGCTAAGGAATGATCTGAATAGCAGTAAGTTGGACTATTTTTACTGGATTTTGACTGGTGTTAATGTGATCAATTTCTT GGTTTATTTGGCGGCGGCGCGTTGTTTCAGAGGGAAAGGAGCACTTGCACAAGTGAGGGATGAGGATGAGAGCATGGTGA AATTCAATGGAGTCTCTCTCTGAGCCACCAAGCACACCATGAAGGGGGAATTTAAATCTGATTATTTCTTTTTTTTCTGC AAAATAAAATTTCTGTGTGTAGGTCTCTGCTTTATGTAGTCTTCATTGCAATTCTTAACAAATTATGAAACACCATATAT AAATTCATCAATCTAGATTCATTCAGTTTATAAATCATGTAAATGTTGATTTTTCAACACATTGTTCTGTACTCAGTTTG CATTTTTTTTTTTATATATATATCTCCCTTTTCTTTGTCAAAA
CDS sequence (LotjaGi1g1v0424000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAATTAAGTACCTTGGTTAGCAATGGTCGCTTGGATCTGCATGGTAGGATTGCTGACAAACAAACAACTGGAGGATG GAAGGCATCGCCCTTTATCATAGTGAACGAAGTGACAGAGAGGTTGGCATTCTTTTCAATTGCAGTGAACATGGTGGCTT ACTTGTTTTCCGAAATGCATCAATCACTTCCGGATGCTGCTACCCATGTCACGGATTGGATTGGAGCTGCCTATGTCCTC ACCCTTCTAGGAGCCTTTCTAGCAGATGCTTACTTGGGTCGCTTCAGAACCATCCTTATTTTCTCTGCTGTCTATGCTGC GGGGATGATTTTGCTGACAGTTTCAGCTTCTCTAGACAGCTTACGCCCGGATAAATGCATTGTGAAACCATGTAAACAAG CAAGCCAAGGCCAAACAGCATTCCTGTACGGAGCACTTGCCCTGATTGCTTTAGGTACTGGTGGAATCAAGCCTTGTGTG TCCTCGTTTGGAGCAGACCAATTCGATGAGGGAGATGAGAAAGAAGTCCAAAAGAAATTCGCTTTCTTCAACTGGTTCTT CTTCGCCATCAACATGGGTGCCCTCCTTGGAATAACCGTTCTAGTTTACACCCAAGAGAAATTAGGCTGGGGTTGGGGTT TTGGAATACCCACAGGTGCCACATTTGCCTCTATCATTGTCCTACTAGCTGGTGTCCGGTATTACCGTTATCAAAAGCCA ATGGGAAGCCCTTTCACCAGGTTCCTTCAAGTTATAGTAGCCTCCATTAGAAATCACCAAAGAGGAATCTCAGTAGGATC AGAAACTCCTCTCTATGAGGTCCAAACCACGCAGTCCGATATAATTGGCGCTCGCAAGCTTCCTCACACTCCACAATACA GGTTTTTTGATAAAGCAGCAGTGGTGATCACAGAAGGGGAAACTCACACTCACAGAAGCAACCGCTGGCGCATATGCACA GTGACACAGGTGGAGGAGTTGAAATCCTTCATCAGAGTCCTTCCGGTGTGGGCTTCCACCATCGCCCTCTCCGTTTCCTT CGCTCAGCTCTCAACCTTCTTCATAAGCCAAGCCAACATCACAGACCGAAGACTCGGAGACAGCTTCAAAATCCCCGCCG GCTCCGTACCGGTGTTCAGCGCCGTCAACGCCCTCCTCCTCGTCCCCCTCTACGAGAAATTCATCGTCCCATTCCTCCGC AACCGCTACGGCCACCCGCGCGGAATAACGTCACTGCAGCGAATGGGCGTCGGACTCTTCATCTCCATCTTCGCCATGGC TTCGGCGGCGCTGGTGGAGAAGAAAAGACGTGAACACTACGCGCAGCCGTTCAGCATGAGCGTGTTCTGGTTGCTGCCGC AATTCTTTCTGATGGGGAGTGCAGAGGTGTTCACTTACGTGGGGCAGTTGGAGTTTTTCTATGATGAGGCGACGGATGGG ACGAGGAGTATTAGTAGTGCGATGTTTCTGGCGGAGATTGGGATCGGAAGCTGGCTGAGCACGGCGTTGGTGAAGATTGT TGAAGGTGCTAGTGGTGGACAGCAGAGAGGGTGGCTAAGGAATGATCTGAATAGCAGTAAGTTGGACTATTTTTACTGGA TTTTGACTGGTGTTAATGTGATCAATTTCTTGGTTTATTTGGCGGCGGCGCGTTGTTTCAGAGGGAAAGGAGCACTTGCA CAAGTGAGGGATGAGGATGAGAGCATGGTGAAATTCAATGGAGTCTCTCTCTGA
Protein sequence (LotjaGi1g1v0424000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MELSTLVSNGRLDLHGRIADKQTTGGWKASPFIIVNEVTERLAFFSIAVNMVAYLFSEMHQSLPDAATHVTDWIGAAYVL TLLGAFLADAYLGRFRTILIFSAVYAAGMILLTVSASLDSLRPDKCIVKPCKQASQGQTAFLYGALALIALGTGGIKPCV SSFGADQFDEGDEKEVQKKFAFFNWFFFAINMGALLGITVLVYTQEKLGWGWGFGIPTGATFASIIVLLAGVRYYRYQKP MGSPFTRFLQVIVASIRNHQRGISVGSETPLYEVQTTQSDIIGARKLPHTPQYRFFDKAAVVITEGETHTHRSNRWRICT VTQVEELKSFIRVLPVWASTIALSVSFAQLSTFFISQANITDRRLGDSFKIPAGSVPVFSAVNALLLVPLYEKFIVPFLR NRYGHPRGITSLQRMGVGLFISIFAMASAALVEKKRREHYAQPFSMSVFWLLPQFFLMGSAEVFTYVGQLEFFYDEATDG TRSISSAMFLAEIGIGSWLSTALVKIVEGASGGQQRGWLRNDLNSSKLDYFYWILTGVNVINFLVYLAAARCFRGKGALA QVRDEDESMVKFNGVSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 41 | 41 | - | – | |
| PANTHER | 4 | 569 | 566 | 0.0 | – | |
| PANTHER | 4 | 569 | 566 | 0.0 | ||
| SUPERFAMILY | 26 | 555 | 530 | 4.32E-24 | ||
| CDD | 31 | 551 | 521 | 0.0 | – | |
| TMHMM | 38 | 57 | 20 | - | – | |
| Phobius | 42 | 61 | 20 | - | – | |
| Phobius | 62 | 72 | 11 | - | – | |
| TMHMM | 70 | 92 | 23 | - | – | |
| Phobius | 73 | 92 | 20 | - | – | |
| ProSitePatterns | 84 | 108 | 25 | - | ||
| Phobius | 93 | 98 | 6 | - | – | |
| Pfam | 95 | 518 | 424 | 6.4E-105 | ||
| TMHMM | 96 | 118 | 23 | - | – | |
| Phobius | 99 | 118 | 20 | - | – | |
| Phobius | 119 | 137 | 19 | - | – | |
| Phobius | 138 | 160 | 23 | - | – | |
| TMHMM | 139 | 161 | 23 | - | – | |
| Phobius | 161 | 180 | 20 | - | – | |
| TMHMM | 181 | 203 | 23 | - | – | |
| Phobius | 181 | 204 | 24 | - | – | |
| ProSitePatterns | 183 | 195 | 13 | - | ||
| Phobius | 205 | 209 | 5 | - | – | |
| Phobius | 210 | 232 | 23 | - | – | |
| TMHMM | 210 | 232 | 23 | - | – | |
| Phobius | 233 | 370 | 138 | - | – | |
| TMHMM | 333 | 355 | 23 | - | – | |
| TMHMM | 368 | 390 | 23 | - | – | |
| Phobius | 371 | 391 | 21 | - | – | |
| Phobius | 392 | 410 | 19 | - | – | |
| TMHMM | 410 | 432 | 23 | - | – | |
| Phobius | 411 | 432 | 22 | - | – | |
| Phobius | 433 | 443 | 11 | - | – | |
| Phobius | 444 | 467 | 24 | - | – | |
| TMHMM | 444 | 466 | 23 | - | – | |
| Phobius | 468 | 529 | 62 | - | – | |
| Phobius | 530 | 549 | 20 | - | – | |
| TMHMM | 531 | 553 | 23 | - | – | |
| Phobius | 550 | 577 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Oligopeptide transport | The directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0424000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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