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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0424000 |
| Transcript ID | LotjaGi1g1v0424000.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptide transporter; TAIR: AT5G01180.1 peptide transporter 5; Swiss-Prot: sp|Q9LFB8|PTR5_ARATH Protein NRT1/ PTR FAMILY 8.2; TrEMBL-Plants: tr|A0A072V2Y9|A0A072V2Y9_MEDTR Peptide transporter; Found in the gene: LotjaGi1g1v0424000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:91830720..91834412) extracted from Lotus japonicus Gifu genome v1.2.
AAAATGCAGCTTCTGCCGTCTGCATATGTCACTTATTTTACAGCCACAAAATCACTAAACAAAACAGTCAAACAGACAAG ACTGAGATAGAGATGCCTATATACTCTGTTAACATAAAAATGCAAAAAGGTGTTACTTTCCCTCTCACAAAACGAATCTC TTAACCTTAGCCCTTCAATTCATGGAGAATCCTTCCAGCAAACTACATATCAAGGCAAGTAAAAAAAAACACTTAAATTG AACTATCATATGTCATTTTACTGAGTTCTATAGGTAGTATGCATTTTTAATATTTTTCAAACAGGAGGAGATGGAATTAA GTACCTTGGTTAGCAATGGTCGCTTGGATCTGCATGGTAGGATTGCTGACAAACAAACAACTGGAGGATGGAAGGCATCG CCCTTTATCATAGGTACGTGATTATGCTTATGCATTTGAATGTGAGTAAAAGTGCTTTTTTGTGGTTTACCAATTACCAA ACAAACACTAACTTATGCTCTGTGTGCCCCTGCAGTGAACGAAGTGACAGAGAGGTTGGCATTCTTTTCAATTGCAGTGA ACATGGTGGCTTACTTGTTTTCCGAAATGCATCAATCACTTCCGGATGCTGCTACCCATGTCACGGATTGGATTGGAGCT GCCTATGTCCTCACCCTTCTAGGAGCCTTTCTAGCAGATGCTTACTTGGGTCGCTTCAGAACCATCCTTATTTTCTCTGC TGTCTATGCTGCGGTAAATTTCTTTTTGTTATCTGTTTCATAAATCTCCCACTATTTGATCACAAAAACGAACTGATTGT CAACCATGGTTTCAACTTGCAACTATACGTTTTGTTGAAAATAGAAGACCCACATCGTGATTTAGAAATAAAATCCTTAG CGTATATAATTCCAAGAATCTTAAGGACGTGGGACTTTTACTCTTAAAGACTTTTGATCAATCATATTCACAGCGATGTG GGACTTGGGCCTGCACTCCAACAAGTTTACTAGTTTCATTTATTAATACAAACATATTCAATAAACAATGTCTGCAATAC TATTATACTAATATATAGATTCTTGGTTGATTTTGAAAATTTCCATATGTTTTGGAACAAACATTGCATATGCAGTTATT ATTTGTATCGTGAAGAAGAAACCAAGTTGCCATTCATGACAACTATCATGCCTTCATCATGTTTATGCTGTTATAGAGTT TTTCGTTTTCCTCTTTCTCTGTTGGATTCCAAAGATGATACAGTCATACAGAAATATAGTGTTTTATTTAAGCATATCTG AAAAAGATTAAAAAATGAAAAGAAATAAAGAAGCAACAAATGAGAAGGTATGAAATCCACCAGGGTTAACTCTCTTAAGT CCCACATTGGTTATGCTTCTCTCATCTTCTTTCTCCTTCTCTTATATAAAGAATGCAACTTCTCACATTCAATCCATCCA AGTTGCTTAGTTGTATCAAATATGAAGATGCAATAACCTAAATTGTGAAATATTAGCTTATTGCATTTCATCTTTGATAC ATTTCTTGCATACTTGATTATTACACAGTAGAAATTTCTTGCATACTTGATATTAGAAATTACAGACTCTAGGTGCTAGT ATGTGAATCAACATGCATACATCTTTATCTGTATTCAAGGTCTTGGAGAGAGAACAAAAAGAAATCAAAAGAAAAGAAAT CAAAAGATCCTATAAATCATAAGAGTTTGATGTTACTTTAACTTGTGAACTCTGCAGGGGATGATTTTGCTGACAGTTTC AGCTTCTCTAGACAGCTTACGCCCGGATAAATGCATTGTGAAACCATGTAAACAAGCAAGCCAAGGCCAAACAGCATTCC TGTACGGAGCACTTGCCCTGATTGCTTTAGGTACTGGTGGAATCAAGCCTTGTGTGTCCTCGTTTGGAGCAGACCAATTC GATGAGGGAGATGAGAAAGAAGTCCAAAAGAAATTCGCTTTCTTCAACTGGTTCTTCTTCGCCATCAACATGGGTGCCCT CCTTGGAATAACCGTTCTAGTTTACACCCAAGAGAAATTAGGCTGGGGTTGGGGTTTTGGAATACCCACAGGTGCCACAT TTGCCTCTATCATTGTCCTACTAGCTGGTGTCCGGTATTACCGTTATCAAAAGCCAATGGGAAGCCCTTTCACCAGGTTC CTTCAAGTTATAGTAGCCTCCATTAGAAATCACCAAAGAGGAATCTCAGTAGGATCAGAAACTCCTCTCTATGAGGTCCA AACCACGCAGTCCGATATAATTGGCGCTCGCAAGCTTCCTCACACTCCACAATACAGGTTAGTTAGTAGTTGATCATCTA AGAACCCAGTGTTTTAAATTGCCGTCCGCAACCACAATTGCAGCCTGCAATGATATCATCACCGCCGCAATTGTGGCTGT TTCAACCCAAATTTATCTGTTACATTCCACAAAGCAGCATCAATTTTAAACCCTGACTCATACATATTAAAATTTTGTGC GAGTTGGGGGCATGTTTAGTTTCAATTCTAAATGCAGTAACAACGTGGATACATCTTTTCAAAAGTAACTATTTGTCGCC TCAATTTGACATCAATCCCTACTAATTTTGTCGCCTAATTTGACGTGAATCCGTACTAAACGTGTATTCACTTGTATTTT TCAAACACACACTAAACAATATCAAATAATTTTGCAGGTTTTTTGATAAAGCAGCAGTGGTGATCACAGAAGGGGAAACT CACACTCACAGAAGCAACCGCTGGCGCATATGCACAGTGACACAGGTGGAGGAGTTGAAATCCTTCATCAGAGTCCTTCC GGTGTGGGCTTCCACCATCGCCCTCTCCGTTTCCTTCGCTCAGCTCTCAACCTTCTTCATAAGCCAAGCCAACATCACAG ACCGAAGACTCGGAGACAGCTTCAAAATCCCCGCCGGCTCCGTACCGGTGTTCAGCGCCGTCAACGCCCTCCTCCTCGTC CCCCTCTACGAGAAATTCATCGTCCCATTCCTCCGCAACCGCTACGGCCACCCGCGCGGAATAACGTCACTGCAGCGAAT GGGCGTCGGACTCTTCATCTCCATCTTCGCCATGGCTTCGGCGGCGCTGGTGGAGAAGAAAAGACGTGAACACTACGCGC AGCCGTTCAGCATGAGCGTGTTCTGGTTGCTGCCGCAATTCTTTCTGATGGGGAGTGCAGAGGTGTTCACTTACGTGGGG CAGTTGGAGTTTTTCTATGATGAGGCGACGGATGGGACGAGGAGTATTAGTAGTGCGATGTTTCTGGCGGAGATTGGGAT CGGAAGCTGGCTGAGCACGGCGTTGGTGAAGATTGTTGAAGGTGCTAGTGGTGGACAGCAGAGAGGGTGGCTAAGGAATG ATCTGAATAGCAGTAAGTTGGACTATTTTTACTGGATTTTGACTGGTGTTAATGTGATCAATTTCTTGGTTTATTTGGCG GCGGCGCGTTGTTTCAGAGGGAAAGGAGCACTTGCACAAGTGAGGGATGAGGATGAGAGCATGGTGAAATTCAATGGAGT CTCTCTCTGAGCCACCAAGCACACCATGAAGGGGGAATTTAAATCTGATTATTTCTTTTTTTTCTGCAAAATAAAATTTC TGTGTGTAGGTCTCTGCTTTATGTAGTCTTCATTGCAATTCTTAACAAATTATGAAACACCATATATAAATTCATCAATC TAGATTCATTCAG
CDS sequence (LotjaGi1g1v0424000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAATCCTTCCAGCAAACTACATATCAAGGAGGAGATGGAATTAAGTACCTTGGTTAGCAATGGTCGCTTGGATCT GCATGGTAGGATTGCTGACAAACAAACAACTGGAGGATGGAAGGCATCGCCCTTTATCATAGTGAACGAAGTGACAGAGA GGTTGGCATTCTTTTCAATTGCAGTGAACATGGTGGCTTACTTGTTTTCCGAAATGCATCAATCACTTCCGGATGCTGCT ACCCATGTCACGGATTGGATTGGAGCTGCCTATGTCCTCACCCTTCTAGGAGCCTTTCTAGCAGATGCTTACTTGGGTCG CTTCAGAACCATCCTTATTTTCTCTGCTGTCTATGCTGCGGGGATGATTTTGCTGACAGTTTCAGCTTCTCTAGACAGCT TACGCCCGGATAAATGCATTGTGAAACCATGTAAACAAGCAAGCCAAGGCCAAACAGCATTCCTGTACGGAGCACTTGCC CTGATTGCTTTAGGTACTGGTGGAATCAAGCCTTGTGTGTCCTCGTTTGGAGCAGACCAATTCGATGAGGGAGATGAGAA AGAAGTCCAAAAGAAATTCGCTTTCTTCAACTGGTTCTTCTTCGCCATCAACATGGGTGCCCTCCTTGGAATAACCGTTC TAGTTTACACCCAAGAGAAATTAGGCTGGGGTTGGGGTTTTGGAATACCCACAGGTGCCACATTTGCCTCTATCATTGTC CTACTAGCTGGTGTCCGGTATTACCGTTATCAAAAGCCAATGGGAAGCCCTTTCACCAGGTTCCTTCAAGTTATAGTAGC CTCCATTAGAAATCACCAAAGAGGAATCTCAGTAGGATCAGAAACTCCTCTCTATGAGGTCCAAACCACGCAGTCCGATA TAATTGGCGCTCGCAAGCTTCCTCACACTCCACAATACAGGTTTTTTGATAAAGCAGCAGTGGTGATCACAGAAGGGGAA ACTCACACTCACAGAAGCAACCGCTGGCGCATATGCACAGTGACACAGGTGGAGGAGTTGAAATCCTTCATCAGAGTCCT TCCGGTGTGGGCTTCCACCATCGCCCTCTCCGTTTCCTTCGCTCAGCTCTCAACCTTCTTCATAAGCCAAGCCAACATCA CAGACCGAAGACTCGGAGACAGCTTCAAAATCCCCGCCGGCTCCGTACCGGTGTTCAGCGCCGTCAACGCCCTCCTCCTC GTCCCCCTCTACGAGAAATTCATCGTCCCATTCCTCCGCAACCGCTACGGCCACCCGCGCGGAATAACGTCACTGCAGCG AATGGGCGTCGGACTCTTCATCTCCATCTTCGCCATGGCTTCGGCGGCGCTGGTGGAGAAGAAAAGACGTGAACACTACG CGCAGCCGTTCAGCATGAGCGTGTTCTGGTTGCTGCCGCAATTCTTTCTGATGGGGAGTGCAGAGGTGTTCACTTACGTG GGGCAGTTGGAGTTTTTCTATGATGAGGCGACGGATGGGACGAGGAGTATTAGTAGTGCGATGTTTCTGGCGGAGATTGG GATCGGAAGCTGGCTGAGCACGGCGTTGGTGAAGATTGTTGAAGGTGCTAGTGGTGGACAGCAGAGAGGGTGGCTAAGGA ATGATCTGAATAGCAGTAAGTTGGACTATTTTTACTGGATTTTGACTGGTGTTAATGTGATCAATTTCTTGGTTTATTTG GCGGCGGCGCGTTGTTTCAGAGGGAAAGGAGCACTTGCACAAGTGAGGGATGAGGATGAGAGCATGGTGAAATTCAATGG AGTCTCTCTCTGA
Protein sequence (LotjaGi1g1v0424000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENPSSKLHIKEEMELSTLVSNGRLDLHGRIADKQTTGGWKASPFIIVNEVTERLAFFSIAVNMVAYLFSEMHQSLPDAA THVTDWIGAAYVLTLLGAFLADAYLGRFRTILIFSAVYAAGMILLTVSASLDSLRPDKCIVKPCKQASQGQTAFLYGALA LIALGTGGIKPCVSSFGADQFDEGDEKEVQKKFAFFNWFFFAINMGALLGITVLVYTQEKLGWGWGFGIPTGATFASIIV LLAGVRYYRYQKPMGSPFTRFLQVIVASIRNHQRGISVGSETPLYEVQTTQSDIIGARKLPHTPQYRFFDKAAVVITEGE THTHRSNRWRICTVTQVEELKSFIRVLPVWASTIALSVSFAQLSTFFISQANITDRRLGDSFKIPAGSVPVFSAVNALLL VPLYEKFIVPFLRNRYGHPRGITSLQRMGVGLFISIFAMASAALVEKKRREHYAQPFSMSVFWLLPQFFLMGSAEVFTYV GQLEFFYDEATDGTRSISSAMFLAEIGIGSWLSTALVKIVEGASGGQQRGWLRNDLNSSKLDYFYWILTGVNVINFLVYL AAARCFRGKGALAQVRDEDESMVKFNGVSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 54 | 54 | - | – | |
| PANTHER | 11 | 582 | 572 | 0.0 | – | |
| PANTHER | 11 | 582 | 572 | 0.0 | ||
| SUPERFAMILY | 38 | 568 | 531 | 3.4E-24 | ||
| CDD | 44 | 564 | 521 | 0.0 | – | |
| Phobius | 55 | 74 | 20 | - | – | |
| Phobius | 75 | 85 | 11 | - | – | |
| TMHMM | 86 | 105 | 20 | - | – | |
| Phobius | 86 | 105 | 20 | - | – | |
| ProSitePatterns | 97 | 121 | 25 | - | ||
| Phobius | 106 | 111 | 6 | - | – | |
| Pfam | 108 | 531 | 424 | 6.9E-105 | ||
| TMHMM | 109 | 131 | 23 | - | – | |
| Phobius | 112 | 131 | 20 | - | – | |
| Phobius | 132 | 150 | 19 | - | – | |
| Phobius | 151 | 173 | 23 | - | – | |
| TMHMM | 152 | 174 | 23 | - | – | |
| Phobius | 174 | 193 | 20 | - | – | |
| Phobius | 194 | 217 | 24 | - | – | |
| TMHMM | 194 | 216 | 23 | - | – | |
| ProSitePatterns | 196 | 208 | 13 | - | ||
| Phobius | 218 | 222 | 5 | - | – | |
| Phobius | 223 | 245 | 23 | - | – | |
| TMHMM | 223 | 245 | 23 | - | – | |
| Phobius | 246 | 383 | 138 | - | – | |
| TMHMM | 346 | 368 | 23 | - | – | |
| TMHMM | 381 | 403 | 23 | - | – | |
| Phobius | 384 | 404 | 21 | - | – | |
| Phobius | 405 | 423 | 19 | - | – | |
| TMHMM | 423 | 445 | 23 | - | – | |
| Phobius | 424 | 445 | 22 | - | – | |
| Phobius | 446 | 456 | 11 | - | – | |
| Phobius | 457 | 480 | 24 | - | – | |
| TMHMM | 457 | 479 | 23 | - | – | |
| Phobius | 481 | 542 | 62 | - | – | |
| Phobius | 543 | 562 | 20 | - | – | |
| TMHMM | 544 | 566 | 23 | - | – | |
| Phobius | 563 | 590 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Oligopeptide transport | The directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0424000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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