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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0424900 |
| Transcript ID | LotjaGi1g1v0424900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Microspherule protein 1; TAIR: AT3G54350.1 Forkhead-associated (FHA) domain-containing protein; Swiss-Prot: sp|Q96EZ8|MCRS1_HUMAN Microspherule protein 1; TrEMBL-Plants: tr|K7KHS6|K7KHS6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0424900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:91958148..91963542) extracted from Lotus japonicus Gifu genome v1.2.
GTTGCATTAGTGGGGTTTTGCGTTGCGGCGTATAAGGAAAACGGCTTAAAACCCTGAACGGAGGAGAAGAAGGAGGAGGA CCAACCACTCATTCATTCACAACACAGACGCTGTGTTCTCGCCGGAGACACCGTCAGTCACTGTTTTCGCCATGGGAGCT CTTCCCACCGTTTTCCCGTGGACTCGTGAGGACGATTTTCTCCTCAAAAACGCCGTTGAGGTTCTTTCTGATTTCTGCTT TGAGTTTCTTTCTCTTCTGCTGCTATGCGTTTTTTCTTCTTTCTCTTTTGCTTATAGCTTCAACACTGATATGAATTACA CACAAATTATAGTGTCAATCATTGGTGAAATTTGCAAGTCATTGATGTAGTGAGGCCCATAGTTGTATTTTTGTTTGTTA ATTTGAATGTTAATGTTTATGTCTGATTAGGGGCATGCACTTTGAGCTAACATGAATCTGATATTCTTTTTATGTTTTCT CGCTTTAATTTTAGAGACAAACATTATAGGATTTATGTTTAGAAGATTAATCTTGAGTTTTTCATTTGCAGTCTGGTGCT TCCTTGGAATCACTGGCGAAAGGCGCAGTGAAGTTTTCTCGAAGATATAGTATTAAAGAAATACAAGATAGATGGTATTC TATCCTCTATGATCCTGTTGTATCTGCGGAATCTGCTGCAACCATGGCAGACTTTGAGACTCGTGCGACGCCTCTCCCGT CAAGGTTTTTTAATTTTGGGCATTCGAAAGGACGTAAATCTGTTTCTGTAAGGAGTAAATGTAAAAGTGTCCGTTCTTCT TATTATGCCATGCGGAAGAGGTTACGCAAGGACTCGGCAACTTCCATGGACTTCAATTTTCTAGTTGATCCGGAAAATGG CGATTACGGGCTGAACGGAAGCGAGCCTTTGCCTGAAAATAGCATACCCGATGGTGCAACTTCGAATCACTTTTCAGATC TTGATCCGGCGCAATGCGTTTTTCCTGAAAATATGATTGATGGTAATGATGCAATTGATGGAGATACTGATCGTGTGGTT TACCCTGGAGCTGACCATGCAGTTGAAGACAATCTTCCCATTGAGCAAAATAGTATACTTGAGGAAGGATTGCAAATTCG TGGTGATGATGTGTCTTTGAATGGAGCTGCTGAGGAATTGGGGGTTCCAGAAAATATGGATGTAGATAACTTGATTGGAG ATGATAATATGCGTTTATCTGCATTGGATCATGTCGACAATGATCATGAAAATTTGTGTTCTGCGTTTTATGAAAATAAT CTGTTTGATTCACCTGAGTTAGAGTGTGGGACATCATTTAACGCCTTACCATTATCTCCGCTGCCTGAAGTGCCTGAAAT GACTGAATTATGGAGAACAGATGAGAACATTCCAGTAGTTAATTTTCAGTATGATGGTGGTTTAAAAGATTCTGTTGCTT GCGGTCTGGCTGACCTGTCTAATGAACTGGAATTTGATGATGATGAACTGTTTTTGATGAATGGTGATAGAAAAGATGGG ATTGATAAGGCTTACTATGATGATTTAAGTTTGCTCTTGCGATATCCTCCAATGGATGTTAGTCCAGATCAGGTACCTGA AAAGGCTGAAACAGAGTTGTTATTGGACTCACATGCCCATGTTGCAGATCTTTCAGTTCCATGCCATGCAAAAGTAGATG ATAACTCGGAGTCGCAATGCAGTAGTGTGCAAGTAGTTCACAAAATAGAGTTCCAAATGCCACCTTCTGCCTCAGCTAAA GATCCTCATTTTCCTGAACTAGTTAACGGAGTTATTAACTGTGTACTGAATACTGAGGACCCAGAAGTTCCATCCAATGA TGACGTTTTCCTACCCTTTGATGTGCCTCAGTCAACATTTTCTCATTCACATAAATCAAAATCTAGAGAATTCAGTAAAT CAATTCCGTCAACTTCTCATGATTATGGATTTAGTAATCATAGAGCTAGTGAAAGAGGTAAAACTTTGATGCAGGTTGAA CAAAAAAACTCCAGACAGCCTTCTCAGATGATGGGATCTCAACTCCCAGGGCCTGTTTGTGGTTCTAAGGTAAAATGTGA GTTGCCCTATGGTCATGCATCACACACAGTGTCTAGGAGTGCAGTTATTGTTTCTGGTGGCTTAGTTGGAAACAATAATG CTGCAAACACAACCAATGCTCCTCTGCATGAAAATACAAAGGAAGAGCCTACCAAGGTTGGCTTGGCAAAGCATCTGAGC AATTGTGCGACAAATTCTTTGATTGAGAAACCAGGCGTTGGTTCTAATGACTTGAGGAACCATCCTAAACCTAATGGTTC TAGCATACAACAGGAACAAGATGTAGCCTTGTCACTTGAAAATCATCAATTGCAACATACTGAAATGGGATCCTCAGATG TTCCTGAGGAGGACGAGGATTCTATAGAAAGTGATGATGATGTTCCTTATTATTCTGATATAGAGGCAATGGTAAGGCGT GTTGAATTGAACTTCCAGTCAACTGTTAACACTTTTTTCATGTCTGTTGCTATTTCCTGACATATTCATTCTTCACTTCT ACAGGTACTTGATATGGACTTGGATCCTGATGATCAGGATTTGTATTATAATGAGGAAGGTATTGCAGAGCTATGAATTT TAACAGCTGTTGCTTGCTTTGTGCCCACTTGTTTCTTTGTTTTTTTGCTCCGAGAGAAGGGACACCTAACATGAATTAAT GACCCAACTGAATAACATTTCTTTTTCTTGATGCTTTTCTGATACTTGCCTTATAGTATGGGAACACACTTCAGATACTT GGGCAGTTAATAGCCACTTTGGACTTATTCTCTTCCTTGTGGTTGCCCATATTTCTGCAATTTCTGAATAAATATAAAAT GAGATAGATCCTTTCTGGAGTGAGCTTTGGCTGTACTTTTGTTGCTAGAATTCATGTTATCATACTTACCATGCAATTCT GCAAATCAATTGCATAGTATATTGAATTTGTGAAATATTTACGAAATATGTGTTAATGTTTGCCTTGATCAAGATATGTC CATGAAATATGATCACATTGTTTATGCTAAATAAATCTAAGAACTAAAGGTCATGAAATATGCTCGCGTAAACCATTTAA TTTTTCATTGTTACCTCTACTGTATGATAGCTTAACAATGTGTATTCTGATTATGATTTAGTATCAAGTTATCAGCATGA GGAAACTAAGCAAGCTATCGTAAGGCTGGAACAGGGTGCTGATTCTATTACGCAGAGGGCCATTGCTTCACATGGAGCAT TTGCTATTTTATATGGTCGCCGCTCAAAGCATTATATTAAGAAAGCCGAGGTATTTGGGCATGTAAATTTACTTGATCTA CTAGTCATCTGAGAATCTTTTCCATTGATTCTTTTTTTGAATATTTAAAGCATAATGAGGTCATGTTATTTTTTGTAATA ACTTCACTACTGCTAAAATTATCTCACAGGCATATTACATACATAGTTACACATCTTTCTGGATGTTTTATTCAGATTGT TTTTCTGTCTTGACGTGACACAGCGATTGATTTGTAAATTTGAGTCATTTGTTCAAACAGTCTAGGAAATAATATTTGGA CAGGCCTGTTAATTAATCAATTATAAACATGAATGTGCTAGGGAAAAGTGCCCTGCTGAAATAGACTTTGTTATTTCCTA GCACATAGAAGCTAAAATAGTGAAGATTACTTGTGATGCGTGACAGAAAATCTGATTGAAATTGTGGTCAAGATTAAATT TAAGACATTGGACGATGCTTTTAATGATGGCTCAATTCATCCTGCAGGTTTTACTTGGACGAGCAGCAGAAGGTGTTCCT GTGGACATTGACTTGAGCAGAGAAGGGAATGCCAATACAATATCTCGACGTCAGGTTTGTTATATTTACTTCTTTACTAA CTTTGACTTAAATGTTAATGTAGCAGCAACAAAGTTGTTGCATTTTGATAGTTTCTGATAAAGACATGCATGTTCTACTT TTAAATTTGGACAAAACTGTGTTTACATCAGAAAATTAGTTATACTACAAACATCTCTGTATGCTTCATGAAATACTTTT CACGGTAAAGCACCTACATTCTTTCTCTTCAAAGAGAAAATCATACCCCATACTTGTCTTTTCCTCCAAATTTTAGCTTC AAAGAGAAAACCAATGCCTTATTAAGAGTCTAGTGGAGGAAGAATTGTGAATAGATGTTATTTATTCTTGTGCATCAAGT GTCTATATATCCTCTAGTGCATTAGGGTTATTGATCTTACCACAGGATCAAACTGTCTCATCTGGTGTGGATGCTGTAAT CGACATTCTACTTAAAGTATTGTGAGGACATACTATAAATATAAATTCAAATAATAGTTCGGGTGGATTATTAATTTTTT CATGTGTAGTTTGTGACATAAATTGGAAGCGCAGATGGTTAGGTATTAATTATGTTTTTCCTTGCTAATCTGTAGGCAAT TATAAAGATGGACAAAGATGGATCTTTCTACATTAAAAACTTGGGCAGGAGTTCAATCCTTGTAAATAACAAAGAAGTGC GCACTGGTCAGTGTCAAAGACTGCATTCCGATTATCTGATTGAGGTATGATACTATGAGCTCTTGTAGCTCCTTTCAAAT TTGATTGATTGGCATGAGTAGCCTCAATGTGAATTTTCTTATTGGAACCGATTTTTTTTTTCCTGATAAAAAAATGGAGA CTACAGTAGCTTGCGGCAAGAACAGAAAAATGCTGAAGATGAAAGATAAATTTGAAATTATGCAAATATAGAATATAAAG CAGATATGGTTTATTTTGCAGTTGAAGAGCATGCCATTCATATTTGAGACAAATGAAAGTTGTGTGAAGCAGTTCCTGGA GCATATGACTGACAATGGAGTGTAATTGTAAATGGTAGCAAGAGGTCCACTAACACAGAAGGTGCTTCTTATTTCTTCTG CACTTTCTGATTTTTGCTAAGGAGTGACCCTGCTATTGCATGTCAATACTTTTATTGGTGGAATGGAAAACTTCTGCAGC TCTTCACTATTCTTCCCCATGTTCCTTTGCCTGTGAAGGTTGATGATTCTTCAACCCCAAAGTTCTGATATGGCAAATTC ATCCCAACCCTGAGTGCTTCTTGTCACCGCCAATGCTGAATCTGAAACTTTATTGCTTATGCAAGTGCAAAGGACGCATA CTACTGTTTGAACAGCATTTTCTTTCTTAAATCTTTGAGCAATTTTACCTTACATTATATTTAGAAGCATAAACAGCAAT CTGTTAGTTGAAAATTACTGCTTTTGGATTCGAGAATCGGTTGAGTTCAATTTTGAAATATTTCTATTGACTAATTTCAA AGATTGTTAAAATTGTGATACTATCTTCAATGCAC
CDS sequence (LotjaGi1g1v0424900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGCTCTTCCCACCGTTTTCCCGTGGACTCGTGAGGACGATTTTCTCCTCAAAAACGCCGTTGAGTCTGGTGCTTC CTTGGAATCACTGGCGAAAGGCGCAGTGAAGTTTTCTCGAAGATATAGTATTAAAGAAATACAAGATAGATGGTATTCTA TCCTCTATGATCCTGTTGTATCTGCGGAATCTGCTGCAACCATGGCAGACTTTGAGACTCGTGCGACGCCTCTCCCGTCA AGGTTTTTTAATTTTGGGCATTCGAAAGGACGTAAATCTGTTTCTGTAAGGAGTAAATGTAAAAGTGTCCGTTCTTCTTA TTATGCCATGCGGAAGAGGTTACGCAAGGACTCGGCAACTTCCATGGACTTCAATTTTCTAGTTGATCCGGAAAATGGCG ATTACGGGCTGAACGGAAGCGAGCCTTTGCCTGAAAATAGCATACCCGATGGTGCAACTTCGAATCACTTTTCAGATCTT GATCCGGCGCAATGCGTTTTTCCTGAAAATATGATTGATGGTAATGATGCAATTGATGGAGATACTGATCGTGTGGTTTA CCCTGGAGCTGACCATGCAGTTGAAGACAATCTTCCCATTGAGCAAAATAGTATACTTGAGGAAGGATTGCAAATTCGTG GTGATGATGTGTCTTTGAATGGAGCTGCTGAGGAATTGGGGGTTCCAGAAAATATGGATGTAGATAACTTGATTGGAGAT GATAATATGCGTTTATCTGCATTGGATCATGTCGACAATGATCATGAAAATTTGTGTTCTGCGTTTTATGAAAATAATCT GTTTGATTCACCTGAGTTAGAGTGTGGGACATCATTTAACGCCTTACCATTATCTCCGCTGCCTGAAGTGCCTGAAATGA CTGAATTATGGAGAACAGATGAGAACATTCCAGTAGTTAATTTTCAGTATGATGGTGGTTTAAAAGATTCTGTTGCTTGC GGTCTGGCTGACCTGTCTAATGAACTGGAATTTGATGATGATGAACTGTTTTTGATGAATGGTGATAGAAAAGATGGGAT TGATAAGGCTTACTATGATGATTTAAGTTTGCTCTTGCGATATCCTCCAATGGATGTTAGTCCAGATCAGGTACCTGAAA AGGCTGAAACAGAGTTGTTATTGGACTCACATGCCCATGTTGCAGATCTTTCAGTTCCATGCCATGCAAAAGTAGATGAT AACTCGGAGTCGCAATGCAGTAGTGTGCAAGTAGTTCACAAAATAGAGTTCCAAATGCCACCTTCTGCCTCAGCTAAAGA TCCTCATTTTCCTGAACTAGTTAACGGAGTTATTAACTGTGTACTGAATACTGAGGACCCAGAAGTTCCATCCAATGATG ACGTTTTCCTACCCTTTGATGTGCCTCAGTCAACATTTTCTCATTCACATAAATCAAAATCTAGAGAATTCAGTAAATCA ATTCCGTCAACTTCTCATGATTATGGATTTAGTAATCATAGAGCTAGTGAAAGAGGTAAAACTTTGATGCAGGTTGAACA AAAAAACTCCAGACAGCCTTCTCAGATGATGGGATCTCAACTCCCAGGGCCTGTTTGTGGTTCTAAGGTAAAATGTGAGT TGCCCTATGGTCATGCATCACACACAGTGTCTAGGAGTGCAGTTATTGTTTCTGGTGGCTTAGTTGGAAACAATAATGCT GCAAACACAACCAATGCTCCTCTGCATGAAAATACAAAGGAAGAGCCTACCAAGGTTGGCTTGGCAAAGCATCTGAGCAA TTGTGCGACAAATTCTTTGATTGAGAAACCAGGCGTTGGTTCTAATGACTTGAGGAACCATCCTAAACCTAATGGTTCTA GCATACAACAGGAACAAGATGTAGCCTTGTCACTTGAAAATCATCAATTGCAACATACTGAAATGGGATCCTCAGATGTT CCTGAGGAGGACGAGGATTCTATAGAAAGTGATGATGATGTTCCTTATTATTCTGATATAGAGGCAATGGTAAGGCGTGT TGAATTGAACTTCCAGTCAACTGTTAACACTTTTTTCATGTCTGTTGCTATTTCCTGA
Protein sequence (LotjaGi1g1v0424900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGALPTVFPWTREDDFLLKNAVESGASLESLAKGAVKFSRRYSIKEIQDRWYSILYDPVVSAESAATMADFETRATPLPS RFFNFGHSKGRKSVSVRSKCKSVRSSYYAMRKRLRKDSATSMDFNFLVDPENGDYGLNGSEPLPENSIPDGATSNHFSDL DPAQCVFPENMIDGNDAIDGDTDRVVYPGADHAVEDNLPIEQNSILEEGLQIRGDDVSLNGAAEELGVPENMDVDNLIGD DNMRLSALDHVDNDHENLCSAFYENNLFDSPELECGTSFNALPLSPLPEVPEMTELWRTDENIPVVNFQYDGGLKDSVAC GLADLSNELEFDDDELFLMNGDRKDGIDKAYYDDLSLLLRYPPMDVSPDQVPEKAETELLLDSHAHVADLSVPCHAKVDD NSESQCSSVQVVHKIEFQMPPSASAKDPHFPELVNGVINCVLNTEDPEVPSNDDVFLPFDVPQSTFSHSHKSKSREFSKS IPSTSHDYGFSNHRASERGKTLMQVEQKNSRQPSQMMGSQLPGPVCGSKVKCELPYGHASHTVSRSAVIVSGGLVGNNNA ANTTNAPLHENTKEEPTKVGLAKHLSNCATNSLIEKPGVGSNDLRNHPKPNGSSIQQEQDVALSLENHQLQHTEMGSSDV PEEDEDSIESDDDVPYYSDIEAMVRRVELNFQSTVNTFFMSVAIS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 670 | 669 | 7.3E-153 | – | |
| PANTHER | 2 | 670 | 669 | 7.3E-153 | ||
| Pfam | 10 | 73 | 64 | 2.9E-15 | ||
| MobiDBLite | 465 | 497 | 33 | - | – | |
| MobiDBLite | 502 | 521 | 20 | - | – | |
| MobiDBLite | 592 | 619 | 28 | - | – | |
| MobiDBLite | 632 | 654 | 23 | - | – | |
| MobiDBLite | 639 | 654 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | G-quadruplex RNA binding | Interacting selectively and non-covalently with G-quadruplex RNA structures, in which groups of four guanines adopt a flat, cyclic hydrogen-bonding arrangement known as a guanine tetrad. | ||
| Cellular component | Ino80 complex | A multisubunit protein complex that contains the Ino80p ATPase; exhibits chromatin remodeling activity and 3' to 5' DNA helicase activity. | ||
| Cellular component | MLL1 complex | A protein complex that can methylate lysine-4 of histone H3. MLL1/MLL is the catalytic methyltransferase subunit, and the complex also contains the core components ASH2L, HCFC1/HCF1 WDR5 and RBBP5. |
Expression pattern of LotjaGi1g1v0424900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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