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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0429600 |
| Transcript ID | LotjaGi1g1v0429600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pathogenesis-related thaumatin family protein; TAIR: AT1G20030.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|P83332|TLP1_PRUPE Thaumatin-like protein 1; TrEMBL-Plants: tr|I1JT26|I1JT26_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0429600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:92458125..92464037) extracted from Lotus japonicus Gifu genome v1.2.
AATGAAATAAGAACTCAGAAGTAACGTTAGTTTTTCCATCCATTCAGGTTCAGCTGTGCCAAGCGTGACGCGTTTGTGCC ACCATATCCAGATGGGTCCCAAAGTGTAAACTCTGGTAAATTTTGGTAACGTGCCCCTAAACTTGTACCCTACTATACTT CTTAGCACCAATATTTATTTGTTGCCTATATATACCAAACAACCCCTCTTCAGCTCAGTTCCAGATCCCAATCCTCAAGT CCCTAATTACCAGAGAAGAAGGATTTTGTCACTCTCCTTCTTCTCCAATCTCCATTTTTAATCCCATTACAACCATAACC ATCTAACTAAACTCCCAAATTTAGCTCTCACACTTACATTGCCGAGTATTTAACACATCTGCATTCACCGGTTTCAAACC TGCATAGGCTAGAACAACCTTGTCGTCGTGCCAATTGAATTTATCTCTCACACTCACATGGATCACCTGACACTATTCTT TTCATTTTTGGTTACTCTTTATCTATCAGTATCATCAGGTAACTATTCTATAAATTAAATGTACTCACCATTCAGAAACA AAAACTGAAATTTCATCCACATTGAATTGTAATTTCATCGAATTGTTGCAGGGGAGGGATCTAGAACATTCACGGTGGTT AACAAATGCGACTACACAGTCTGGCCAGGCATTCTCACTAACGCCGGTGTCACGCCGCTTCCAATCACCGGCTTCGTCTT GCAAACCGGCGAGTCCAAGCTCATACCCGCACCCGCCAATTGGGGAGGCCGATTCTGGGGCCGCACACTCTGCAGTCAGG ACTCCGCCGGAAAATTCACCTGCGTCACCGGCGACTGCGGCTCCGGCAAGCTCGAATGCGCCGGCAGCGGAGCAGCACCA CCGGCCACACTTGCCGAGTTCACACTTGACGGATCCGACGGCCTCGATTTCTTCGACGTGAGCTTGGTCGACGGCTACAA CGTGCCGATGCTGGTTGTTCCGGAGGGTGGATCCGGCAATAACTGCACCGCCACGGGTTGCGTCGGGGATTTGAACGGCG CGTGTCCTTCAGAGCTTAGGGTTACGAGCGTGGATGGGAAACGGAATGTTGCGTGCAAGAGCGCTTGTGAAGCGTTTGGG TCGCCGCAGTACTGTTGCAGCGGCGCGTATGGCTCACCCAACACGTGCAAGCCTTCTACTTACTCTCAAGTGTTCAAGAG CGCGTGTCCACGCGCTTATAGCTACGCGTATGATGATAAGAGCAGTACCTTTACGTGCGCATCTGCTACTGCTTACACCA TCACCTTTTGCCCTTCCCCAGATGGTAACCCCAGGTTAGATTCACCTTAGTGCTAATTTACTTACTTACCCTTTTTCACT AGTAACATTTTTTTTCATTATAACGGCTACAAGGGTAGTTTAGTCTAAAGCAATAGCAAAAGGTAACCGTTGGGTGCGGT AACGGCTTACACAATTTCTGCTAACTTTTTTTTTACCACTTCCATAGTGACGAAATAAGAGTAACCGGTAAACCCCTGAA TTAATAATTAATTTTATTCACCATCTACTTTATTGTTTATTTCCTACAATATCTTATAGCCAATAGTCTTAAAGATTAAT TTTGGCTCTTCGATTATATTAAGTGAGTAGGTCTCTTCCTACGAATCATTTTCTATACATATCGTTAAAGCAACGAACTC AAATCTAGATACTTGAGGCGCACGACTATTTACCAATTGTGCTTAGACTTGGTCTTAGTTTAAGGATTGATTTTTAGTTG TGATGAACATTGAGATTTGTGTCCACCGAGTTACGGTCCATAGTAACTAATCATAATCAGCAGGTTATTACCTAGGCAAC CCAGCTCAATCTTCGGGACACGCTTGAAGCCCAATAAAAGTCGGGTTTAAGGGTTTAGACTGTTGTGTGTGCCTATTGAA CTACAGGTCACGATAGCGGACCTAACCACCCCACAATACCGAAGCCTAGATGTAACCTCACTTAAATAGTTGTTAGTAAC TCTCAAAACCATTAACTAGTCATTATGTCATTTAATGACATGATAAATCACTCTAATCATAACATCTAGACAACTAAAAG TCAAATAGGCATCCTTAAACCTATAAAATGACTAAGGCAAACAAGGTTAAAACATCTTCACTCTAATACTAATACTAATA CTAAGGGTCCGTTTGGTGCGACGTATAGTATAAGGCCTGATAGTATAAGACCTGATAGTATTAGGCCTGATAGTATAAGC CCTGATAACTTCCTTATACTATCCAGCGTTTGGTCATACTCTGTATAATTTACCATATCGTTTAAATTAATGCAATTTTA TATTTAATGAAGTATTGAATAGTGATATATAATAAAAATCAAATATGGAGGTGATTATAATGGTGGTGGCGGTGATGATG GAAGTGGTGGTAGGTTGGTGGTGGTGGTGGCAATGGTGGTAGGTTGGTGTTGGTGGCGGTGGTGGTGACAGTGGAGATAG GTTGGTGGTGGTGGTGGCAGCGATGGTGGTTGTGGTGGTGGCGATGATAGGGTGGTGGTGGTGGTGGTAAGGCGGTGGCA GCTACGGTGGAGGGTGGAGGCAATGGTGGTGGTGGTGGCGATAGGGTGGTGGTTGTGGTGTCGGTGGTGGCGGTGGTGGC AATAGAGTGGTGATGAGGATTATGGTGGTGGTGGCGATAGGGTGGTGGTTGTGGTGTCAGTGGTGGCAATAGGGCGGTGG TGGCGGTGGCGACAACACCGGTGGTGGCGGTGGTGGTGATCAGGTGGTGGCAGCGATGGTGGTTGTGGTGTTGGCGACGA TAAGGTGGTGGTAGTAGTAAGGCGGTGGCGTCTTAGTAGGGTGGCGGCGACGGTGGAGGGTGGAGGCAATGGTGGTGGTG GTGGCGATAGGGTGGTGGTTGTAGTGTCGGTGGTGGCAATAGAGTGGTGGCGGCGATTATGGTGGTGGTGGCGACAGGGT TGGGGTGGTGGTGGCGGTAGGGCGGCGGTGGTGGTGGTGGCGGCAACACCAGTGGTGACGGTAGGGCGGTGGTGGCGGCG GCGGCGGCGGTGATCGGGTGGTGGCGGTGGTGGTGCCAATGGTGGTGTAAGTTGGCAGCAATGGAGGGTTGTGGTGATGG TGACTTATACGTCACAACCTTATCATGCCTTATCCATCACTCACATGATGGATTAAATAATACATCATTTTAACGTATAA GGTGACTTTGATGGATAAGCTTATACAATACAATGTCATCACCAAACAATGGATAAACTTATAATGTATTGTATAAGCTT ATACTATCATGCCTAATACGGCGTGCCAAACGAGCCCTAAAGGCTAGATTGTGTGTTTGTCATTGAGTCTAATCCCAAAC TCCCTGAGAGAACAGAATTAATGTAGGGTTGTATGAACTACATGATAGGAATTGTATACTGTTATTAATAAAGTCAGTGA GTACAAAAAGAAGGAATCATGATGGTAAGATCTATATAAAAATTGATTGAAAAAGAATTGTATGTTCTACTTTTTTCACA CAGTTAATCATACTTTCTTTTCAATAATGAAGATTTATTTGACTTGGATGACATGGGATATGGGGAGTGGATTAGGCAAC ATAGCTCTTTCAATTATTCATCCATAGAATTGATGTCACTTGGAGAAAGAAGAATCTACATATCAATAATGATAATGGCC TATAATAGGAACAAAATTTGATTTTTTCTCATCAGAAACACTGTTCACAAATTTTAGTACTTCTTTCTTACCGCTCTCAT TATTGTGCAGTAAGAAATCGGGGCAAGAGCAACATCCAAATTTTACCTCACCACCGCAGGTTAGCAGCGGCACAATGGTG TACGTAGGTGCCTTAGATCAAAGTCAAATATCAAGTGCAACAACAGAATCCAATGCTATTGCGGGCATTGTCAGCATAAC CATCTCTATTTGGCTCTTGTGTCATCATCACCTCTTCTAAGTTCTAAGTTCTAACTACTACTTCCATCAGCAATTTTCTC AAAATTAGGCTCATGAGTCACATTATTATTTAATTTGGTGGGATCCTATGTATATCCATTGTCTAAGTTCACCTATCCAC CACATGAGACAAACGTGCGAGTCATATCTTTTTGTCCTCAAGAAGGAAATAGGGCCATTAAATTATTTCTTTTTCCTTAT GTATTTTTCTCAATTAGATCATACTATAAGATTCTTTGCATTGTAGGTGATAGGATCATTTATTTGTTCTGAAATGTTGG ATGGACTGTATAATAATACACTTCCATTTGCCACAAAATGCATATGGATTCGTATTTTTAGTATTTCATACTGTATTGAT CTATCTTTAATCTAGCATGATAATAGGACACAGAACTTGATTTCGAGCCTAAAGCAGCATAAGGCAAGAGAGTGAGTGTA AAACCGGATAACATAAACTAATCTTGCGTCTAAAATGTGTAATCAATCATAAGGATAATTAGCAATTAAAAATTATGTTT TTGGTATTTTAATTGTCTATTTCATGAGTGCACATTATGGCTTGGCTGGCCCGGCTAGATAGCCATGGATATGTCTTCTT TCTAATTATTGTAACTTGCAAGTATAACTGTGTGAGCACATTTGGATTATTCAATTATAAGCATCCTCTTTATGGTCACA TCTTCTGGGACCGCTGTTATTGCAAATGGAATAACTTCAATTTAAAATAAAATAAGTGGCCTAGCTAGTCTCCGCCACAG TTTGATTGATGGGCTGTGAGTGGTGCAATCTTGCAATTGTATAGCAACCATGAGTTTATTAACTTCTGTAAGATAATTTG ATTCTATTGCTAATTTGTTTTGTGGTTAGTGGTTGTTCCAGATCTTATCCTCCATTTTATATTGCAACTTTATAAGGGAC TGCGAAATTGTTTATCCATAGTTGAAAACCTGCACCTACCGTCAATTAGTGGCGGAACCAAAAATTTTGGAAAGATGGGG CAAATTTATGATTGAGTCCCTAAATTTTGTTTTACCTTATAAATTTTGACCTTTCTTTCTTTTTTTTGGGCCAAAAAACT TACATAATCCAAAGAAATTTTTATTTTTTTTCATTGAGTCAGGGCATTGGATCGGACCTACCAAGCCTGGTGGTAGATCC GCCATTGCCGTCAATTGTAATTAGGAAAACTCCAAGGATATGTTTTTTTTTTATAAGCACTCCAAGGATATGTAACAGGC ATTACATAATTTATGCTATTCTTCATTTTTGTACTGAAATTGCAGCAACTTTATTACAAATTATAGTTTCAACAACCTGC ATAAATTGTAAATCCAAACGAGATCACATAATTAAGTGGGTTTATGTTAGAGCAAATCTTGACTTTTGGCGTGCTTAATC ATCATGATTTATGAGTTGATGAAGTTTATTGATCATCTACCCGTAGCTAATATCTTATTGTTGGGCAGGCACTTCAATTT CAGAGAAGAACCCTTAGCCGCCACCCCTGCAAGGCTTTTTTATAAATAAAACAATGAAAGCTGAAATATTAAAATCAAAT ACCAATGATGAAATTGTTGTTGCTTGTGTTTGATTATATCATTATTGTTGGGTGCATTAAGGGGTAATTGGTTGGTTGCA GCTTAGTGACTCAACTGAATTTTCCAATGAGACAAAGACAATAGGATAAACCTCTGTTTTGGACCCACTCTTCTATTATT AGGCTGATAGTGCTTGCGTAGTGTGTTACATTACACTACTCCTTTGGCAGGTTTCTCCTCTCGTCATCCGCGTGGTCTAA TATCTCAGCTCGCGTACTCATTCATGCCACTACTTGCCTCCAACCGTTTCCACGTTTTAGGTATCTATATAGGAGGGGCG GATCGAGACCTAATATATCAGTGCGTATCCAGACCTAATATATCAGTGTGGCTAAACATAAAGAAATTATAAG
CDS sequence (LotjaGi1g1v0429600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCACCTGACACTATTCTTTTCATTTTTGGTTACTCTTTATCTATCAGTATCATCAGGGGAGGGATCTAGAACATT CACGGTGGTTAACAAATGCGACTACACAGTCTGGCCAGGCATTCTCACTAACGCCGGTGTCACGCCGCTTCCAATCACCG GCTTCGTCTTGCAAACCGGCGAGTCCAAGCTCATACCCGCACCCGCCAATTGGGGAGGCCGATTCTGGGGCCGCACACTC TGCAGTCAGGACTCCGCCGGAAAATTCACCTGCGTCACCGGCGACTGCGGCTCCGGCAAGCTCGAATGCGCCGGCAGCGG AGCAGCACCACCGGCCACACTTGCCGAGTTCACACTTGACGGATCCGACGGCCTCGATTTCTTCGACGTGAGCTTGGTCG ACGGCTACAACGTGCCGATGCTGGTTGTTCCGGAGGGTGGATCCGGCAATAACTGCACCGCCACGGGTTGCGTCGGGGAT TTGAACGGCGCGTGTCCTTCAGAGCTTAGGGTTACGAGCGTGGATGGGAAACGGAATGTTGCGTGCAAGAGCGCTTGTGA AGCGTTTGGGTCGCCGCAGTACTGTTGCAGCGGCGCGTATGGCTCACCCAACACGTGCAAGCCTTCTACTTACTCTCAAG TGTTCAAGAGCGCGTGTCCACGCGCTTATAGCTACGCGTATGATGATAAGAGCAGTACCTTTACGTGCGCATCTGCTACT GCTTACACCATCACCTTTTGCCCTTCCCCAGATGGTAACCCCAGTAAGAAATCGGGGCAAGAGCAACATCCAAATTTTAC CTCACCACCGCAGGTTAGCAGCGGCACAATGGTGTACGTAGGTGCCTTAGATCAAAGTCAAATATCAAGTGCAACAACAG AATCCAATGCTATTGCGGGCATTGTCAGCATAACCATCTCTATTTGGCTCTTGTGTCATCATCACCTCTTCTAA
Protein sequence (LotjaGi1g1v0429600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDHLTLFFSFLVTLYLSVSSGEGSRTFTVVNKCDYTVWPGILTNAGVTPLPITGFVLQTGESKLIPAPANWGGRFWGRTL CSQDSAGKFTCVTGDCGSGKLECAGSGAAPPATLAEFTLDGSDGLDFFDVSLVDGYNVPMLVVPEGGSGNNCTATGCVGD LNGACPSELRVTSVDGKRNVACKSACEAFGSPQYCCSGAYGSPNTCKPSTYSQVFKSACPRAYSYAYDDKSSTFTCASAT AYTITFCPSPDGNPSKKSGQEQHPNFTSPPQVSSGTMVYVGALDQSQISSATTESNAIAGIVSITISIWLLCHHHLF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| PIRSF | 1 | 294 | 294 | 3.5E-108 | ||
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 1 | 21 | 21 | - | – | |
| Phobius | 4 | 16 | 13 | - | – | |
| PANTHER | 16 | 293 | 278 | 3.9E-137 | ||
| PANTHER | 16 | 293 | 278 | 3.9E-137 | – | |
| Phobius | 17 | 21 | 5 | - | – | |
| Phobius | 22 | 317 | 296 | - | – | |
| ProSiteProfiles | 24 | 248 | 225 | 44.957 | ||
| Gene3D | 25 | 248 | 224 | 1.9E-96 | ||
| SUPERFAMILY | 25 | 249 | 225 | 8.24E-84 | ||
| PRINTS | 26 | 38 | 13 | 3.0E-15 | ||
| CDD | 26 | 247 | 222 | 5.66015E-126 | – | |
| SMART | 27 | 248 | 222 | 5.6E-119 | ||
| Pfam | 31 | 248 | 218 | 3.5E-84 | ||
| PRINTS | 74 | 85 | 12 | 3.0E-15 | ||
| ProSitePatterns | 87 | 103 | 17 | - | ||
| PRINTS | 126 | 142 | 17 | 3.0E-15 | ||
| PRINTS | 238 | 247 | 10 | 3.0E-15 | ||
| MobiDBLite | 252 | 272 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0429600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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