Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0440300 |
| Transcript ID | LotjaGi1g1v0440300.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | RING finger protein; TAIR: AT5G01520.1 RING/U-box superfamily protein; Swiss-Prot: sp|Q5ZM74|RN141_CHICK RING finger protein 141; TrEMBL-Plants: tr|A0A151T8Z8|A0A151T8Z8_CAJCA RING finger protein 141 family; Found in the gene: LotjaGi1g1v0440300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:93618781..93627312) extracted from Lotus japonicus Gifu genome v1.2.
AAGGGGTTTAGTCTGCAAAGAAGGAAGAATCAACATAAAGGAATAGGAGAGATGCGCAAGACTTTCAAGGATTCACTCAA AGCTCTTGAAGCTGACATACAGTTTGCTAATACTCTGTAAATTTTTCTTCTATCCCTTTTCCTTATCTAGAACCCCAACA ATTTTTTTAATTTTTTGGTATGAATGTTGAATTATGTGATTTTGGATAATACCCATTTCTCAAATAGCTGGTTTCTTTAG GTAGATGCTAAATTTCTGATTTTTTTAATTTTTTTTTTTTGCTGTGTTGTTGCTGAACCTTGTATAGAACTATACAGTTC AAATTTCTGTTTTTTCAACTTGTATTTTACATTTTATTTTTATTTTTAATCACTCTTATGCTTAAGCTGAAGAAAGAAAA TAGTGAACTGTACGCTTGAGGTGGGGCTTAATAGGAGAATAAAATATGGGAATTGAGTTGAAGGAAAGGAAATGAAAGGT GGAAGGGGGGGTAAGAGTAAGAAAATGCAATCATGCTCTTGTTGAAGCAAAGGTGTTAAAGTGTTCATTTTTTCTATGGA ATATAGATTTGTAAACCCAAAAAACTTATCATTTTGCTGGCTTTATATGCTTTTTTCAACTGAACCTCTTTTTAAAATGT CTTTTGATTTTGTCATTTTGAAGGAAATGGGGCGCTTCAATTCATTAGTGTCTTTCCCATCATGTGGCAGGGGTGCCTCA GTTTTTGGAAATTTTGTCTCTCCTTTTTGTAAAGAGGTTCCCAATCATGTTAAGTAAAGTCTAGCTTTTTTTCATTTTTT TTTTTGGTACAGTGGTAGATTGAAAGACCCTACTATCTTATTCTGTGTTTAGCAGATAAAATTTACAATTTGTGTGGATG GGGATGTAAAAGAACAAAGAAAAGAAACAACGCATCTGAGATATGTTTGAAATGTTATGTAAACAACAACAAAAATGCAA AGAAAGAAACAAGAGTACAATAAGTTGCTTGTGTCACTTCTAGCTTCCGAGTTTGTTTTGTATTTTAATGCTGTAGGATC TGGCCTTCAATTTTTTGTTTGAACGCTACTGTTTGAACGCTACTGTAGACTTGGATTATTGTCACAACATGAGATGAAGA AGCTTTTATGTGCTTACTTTAAATTTAGATGCTTATCAGTGAAATTCAAGAGACCATTTTCTTTGATGTTTCAATAATAA ACAAAATTCAAAAGAAAACTTGTTGTTATCCTATGTTTTTAACCCGTTCTTTGTGCCGAATATGTTTTGAAACAGTGCTT CTGGTTATCCAAGTGATCAGGATGGTGCCTGCCTCCAGATGAGATTGTCTTACAGCCCAGCTGCTCAATTCTTCCTTTTT CTGGTTCAGTGGACTGATTGCCACCTTGCCGGAGCCTTGGGATTGCTTAGAATTCTTATATACAAGGTGCATACCCTACT TCTTTTCGGTGCTTATCAACACTTCTATAAACATGTTTGGATTCACGTTTATATCTTCCAAAATCACTTTTGCTAGCTAC CATAAAATCTACTAGGAGTAGCTTCTCCCAGAATCGATCCACCGTTAGAATCTACTGTGTATCCAAACATGAACTATCTT TTCCTTTAGACAACCTATTCTAAAACATGTGATCTTCTTGATAGCATGTTTGGATCCGCTTATTTTTCAGCAAAACCAAT TTTGGCACCCAGAAGCTTTTCACATACACAAGCGTCTCTCCGAAATTGATTTTAACTTTAGAATCACAGTGCAGAACTGC AACCAATGTTACTATTTTGTTCTCATGCTAGTGAATGATATACATAGAACATATTCGGTTTGTCACAGGCATATCAGGAT GGGAAGACAACCATGTCCATTTACGAAAGAAAAGCCAGTCTGAAGGAGTTCTATAGTAAGTCCAATTCTACTAAGTAAAT TGTCTTATTGAAATATAGCTGTCAATATCTGCTTGAGACCATGCCATGTGATAATTAAGTTTTGTTATCTTTACCATTTT ATAGGAAAGTGCTTGGAAATCCAAATGTAGTTATGGATTACTTTACACTCTCTATTAACAGGTGTGGTCTTTCCCTCTTT ATTGCAACTTCACAGAGGAATCACAGATGTTGAAGAGAGGAAACAGAAACATCTATGTGCTACTAGGTACAAGCGTAAAG ATTTAACAAGCAAAGGAAAGCTCTCTGAAATCGACATAGAGAGAGAAGAAGAGTGTGGTATTTGCATGGAGATAAACAGC AAGGTTGTATTGCCCAACTGCAATCACTCAATGTGTATGAAATGCTACCGAGACTGGTGAGAAATGTTTCGTACAGAATA CTTCTGATGATCTAATGGTAATAAGGCTAAATAATTGAATGAAGCATGCCCATTGAAAATAATGATTCAATAGTTATGGT AGAGGCCAAAGAAGTTCTAGTCTACAGAGTAATAGAAATGAATATTGAAATGAAAATAAGCCACTGTTCTACAGGGTATG ATGGGGAGTCTTATTCATTGCAATATACGTAACCAAATTATTATGGCATTTGAGGTTTTTGTTGAGAAGTTTCACATTGA CTAGATATTTGGCCAAAATAGTCATTTTAAAGGGTAAAGCAATCCTCAATTCCTCACCTCTAAGCTAGCAAGAGGTAGAG TTCTGAAGCAAATGCCGAATCTGTAGGCTTTCTCATGTTGTCTAATTTTTCTCATTTGGTTACAATATCACATTGGAAGA TAATTACATTAATCCTCCTGAAACACTTCCAAGTGACCTCAATATCCACTGATTGTTTCATAAGACAACTGTCATTTATT TGTTTATCTTTTTGGAGATGGTCAAGTTGAGTAAAGTTACATATATTTTTAGTTAGTACAGAACAAAATAGTCGTTTTTA TCAGCCAGCAAATTTTTACTACATTTCATTATGGCTGGACTCAAGTTTGGAAATCTTTCTGTTGGAAAATATATCAGTAT TTATTGTTTTCCAGTCAATTCTAGAGATTCTATTATTGACTTTTTTATATGTAATAATTTTCTCCTTAATTCAAGGAGTA GTAATTCTCTCCTTAATTCAAGGAGTAATAATTGTATCCTCTCTATAAATACCAGCCTTTGGCTGAGGAATAAAACAGAA CAACATTTACCTATTATTTTCCAATATGGTATCAAGAGCCCTAGGTTGGGACTTCTACTGTAGAGCTTTCCACAGCTAGT CTGATCAACCTATTTCCTTCCCCGACCCGTTTCACATACCCATTTAGCCTCCTATGGCAGGTCGCAATAGGTGGCCCTCC ATAGCAGAGGCCTACACCGGATCCACAACCAACCACGGCGAACAATCACTTGACTCGGGCGTCAACAGCGGTGATGGCGG TGGCAAAGGAGACGGCGGTGGCCGCGGTAATGGTGGTGGTCGTGGAGATGGCACACCAAAGTTCGTCGCAAACAGTGGCG GTAATGGCGGCAACAATGAAAACAGGAACAACAGTGTTTATGGTGACAGTAATGTCAATATAGGTTGCAATGACCAAGAG GGTTCCTCATACTCCCTCAAGGTCAATATTCCTAAGATGAATGGGAAGAACTATAATGAATGGGCCCAAACCGTTCGCTT GGTATTGGATAGCAAAGGGAAGCTTGGTTTTTTAACAGGAGCAGTAGCTGAACCAACAAGCGGAGACCCTCGTTACAAAC AATGGAAATCTGAAAACTCCTTGATTATTGCTTGGTTGGTAAGCTCTATGGAAACTGGAATAGGTAAGCCTTACATGTTT TTGCCTTCTGCAAAGGATGTGTGGGAAGCTGTTAAGGAAACATACTCTGATATTCAAAACTCTTCCCAAATTTTTGGTTT AAAATCAAAGTTATGGCAGGCTAAACAAGGTGACAGGAGTGTAACTGCTTATTACAATGAGTTGTTGACCCTGTGGCAAG AATTAGATCTCTGTTATGATGACAATTGGAGGTGTACAGAAGATAGTGTTCTGTTTCTCAAGAGGCAAGAAAATGATCGT GTCTTCATGTTTCTTGCTGGGCTAAATACAGACCTTGATGAGGTAAGGGGTCGAGTTTTAGGAAAAATACCATTGCCAAC TCTTCGTGAAACTTTTGCAGAAATCAGAAGGGAGGAGGCACGACAAGGAATTATGATGGGCAAGACACCACGAAGTTCTG AATCTGAAGGCTCTGCTCTGGCTACTAGGAACCTCGGCGAGGGAAAAAGGTCAGACAAAGTTCCTTGGTGCGATCACTGC AAGCGCGAATGGCACACGCGTGAAAATTGTTGGAAGCTCATAGGAAAACCTCCTAACTGGAAGAAGAAAGGTGGTCGTGC ATTTCAAGCAAGTAATTCTGATCAAGGGCAGCAATCCTCTACGACTCAGCTTCCGCTCACTACGGAACAACTAGACAAAC TGCTCAAACTCCTCGAGTCTTCAACCCCTTCTTGCTCTATAGCAACAAAAGGTAATTCTGCATGTCTTAGTGTCAGTTCC AGTCATACTTGGATATTAGATTCAGGTGCCTCGGATCACATGACAGGTGAATCCACCTTGTTTTCTTCATATAGTCCATG TGCAGGTAATCAAAAAATAAAAATTGCAGATGGCTCTTTTTCAGCCATTGCAGGTAAAGGGTCAGTTGTGTTGTCTCCAG TGTTAACTCTTAACGATGTCCTTCATGTTCCAAACTTATCCTGTAATTTAATGTCTGTTAGTAAATTAACCCGAGATATA AATTGTCAAACCAATTTTTTCCGTTCTCACTGTGTCTTTCAGGATTTGAACTCGGGGAAGATGATTGGCAGTGCTAAGGA GAGTGGAGGACTCTACTACCTTGACATTGGATCTGCATCACAACTACCTCCAAAAACAATAAGTTCCTGCTTTGAATCTT TTTTTGTTTTGAATAATAATGATGACAACGTTATGTTATGGCATTTACGATTAGGTCATCCTAGTTTTCATTACTTAAAA CACTTGTTTCCTAAGTTATTTTATAATAAGAACCTTTCTTTGCTTAAATGTGAAGCATGTGAGTTTGCAAAGCATCATCG TTCCCAATTTCCAATACAGCCTTATAAACCATCAAAACCTTTTTCTATTGTTCACAGTGATGTTTGGGGCCCTAACCGTA CAAGTACACTTTCTCTTAAAAAATGGTTCATCACATTTATAGATGACCATTCAAGAGTATGTTGGGTGTACTTGTTAAAG GGGAAATCAGATGTTTGTCAGGCTGTAAAGGATTTTTGTACAATGGTGCAGAACCAATATCAAACAAATATTCAAGTCTT TAGAAGTGATAATGGCAAAGAATATTTTAACACTAGTTTGGATGATTTTTTCCTAAAAAATGGGATTGTACATCAAAGTT CATGTCCTAATACCCCTCAACAAAATGGAGTTGCTGAAAGAAAAAATAGACATTTATTGGAGGTTGCTAGAGCATTACTT TTCTCAAGTAAAGTACCAAACTATTTGTGGGGCGAAGCTGTTTTAACAGCGGCATATTTAATTAATAGAATGCCCTCCAA AGTTCTCAATTTCCAAACTCCAATTAATACTTTCAAAGAATGTTTTCCTAGTACTCGTGTTTCAACTGATTTGACATTAA AAATCTTTGGTTGCATAGCCTTTGTTCATGAACATAAAAATGTTGGAAAACTTGAACCACGTGCTATAAAATGTGTTTTT GTTGGATACTCCCCAACCCAAAAGGGGTATAAATGTTTTGATCCAAAAAACAAGAAAATGTTTGTCACTATGGACGTTAC GTTTTTTGAAAATAAACCTTTTTTTAATGACACTCATCTTCAAGGGGGGGATATAAAGGAAGACTCGTTTCAAATTGAGG ACATGAGTTTTTTAAATAAATTATCTTTGCCTGTACCACAAAGCTCTAAGACTTATAGTTCTGCACCAACAGAAAATGGC CAAGATACTCTATCTGATCCTACTCCTGTTATGAGTAAGGAACTTGGGGAATCAGAGCCTACATTTTCTCATGAAGAAAC CAATGAGAATCTTGACAATAGGGATGATGATGATCTAATTAAAATGCCACAAAATAATGAGTCACTTAAAGAGAACAGAT TTGAAGTAGGAAACAGGACTTGGAAAGGGAAGGTTTATGTGAAAAAGCACCACAAAGAAAGGAATGAGTCCACATCTCAA CACTGTCAGGAATCTGAACCGGGGAATGATCAACCTCCTAAGAAAATGAAAGGTAAGTCTATCTCTGTTTCTGAGAGTCG TATTTTGTATCCTGATATAGATGATCCTGTTGCCATTAGAAAACCTGTTAGATCTTGCACTAAACACCCTATTTCCAATT TTATATCATATTCAAATTTGTCTTCATCTCTGTCTGCCTTCACCTCAAAATTGTCTAGTGTAGAAATTCCAAAAAATGTC CAGGTTGCTCTAGAAATTCCAAAGTGGAGGGAAGCTGTACTTGAGGAGATGAAAGCTCTTGAAAAGAACAAAACTTGGAG TGTTATGACACTACCAGATGGCAAGAAGACAGTTGGATGCAAATGGGTGTTTACTGTGAAGTATAATTCAGATGGGTCAA TTGAAAGGTACAAGGCTCGCTTGGTGGCGAAGGGCTTTACTCAGACCTATGGTATAGACTACTCAGAGACATTTGCTCCT GTTGCAAAATTGAACACTGTCCGAATTCTCTTATCTCTTGCTGCCAACCTGGATTGGCCCCTACATCAATTGGATGTTAA GAATGCGTTTCTTAATGGTGATCTAGAAGAAGAAGTATATATGGAGATTCCTCCTGGCTTTGAAAGCAAATTTGGACCAA ATGTATGCAAACTAAATAGGTCTTTGTATGGATTAAAGCAGTCCCCTAGAGCTTGGTTTGAAAAATTCACTCAGTCCATG AAGAAACAAGGGTACATTCAAGGACAGGCTGACCACACCTTATTCACAAAATTCTCCCACGATGGGAAAGTTGCTGCCCT GATTGTTTATGTTGATGATATTGTCCTTACTGGAGATGATACAGTTGAAATGGCAAGAGTAAAAGAGAAATTAGCAGTAG ACTTTGAAATCAAGGACTTAGGACCCATGAGATATTTTCTTGGAATGGAGGTTGCTCGATCAAAGAATGGTATTGTGGTT TCACAGCAGAAATACATTCTAGACTTATTGAAAGAAACAGGAATGAGTGGATGTCGTCCAGCAGATACCCCTATGGATCC TAATGCTAAACTTTGGGAAGAAGGAAGTGTTCCCGTTGATACTGGAAGATACCAAAGATTGGTTGGGAAACTGATTTATT TGTCACACACTCGACCTGATATTGCTTTCTCAGTTAGTGTAGTGAGTCAGTTCATGCATTCTCCTCTTGAGGAACATCTT GAGGCAGTCTATAGGATACTGAGATATTTGAAGGGAAATCCCGGAAAAGGCTTATTTTTTAAGAAGACTAGTGAAAGAAA TGTGTCTATCTTCACCGATGCTGATTGGGCAGGCTCAGTCACAGATAGAAGATCAACCTCTGGATATTGTACCTATGTTT GGGGTAATCTTGTGACATGGAGGAGCAAGAAACAAGGAGTTGTGGCAAGAAGTAGTGCAGAAGCTGAGTTTAGAGCTATG GCTCAAGGTATTTGTGAAGGATTATGGATTCATAGAGTCCTAGAAGAACTTAAGATGAAAATTGAGCTTCCATTGAAATT ATACTCCGACAGTAAAGCTGCTATTAGCATAGCTCATAACCCAGTTCAACATGACAGAACCAAGCATATTGAGATTGATC GACATTTCATAAAGGAGAAGTTAGATGCTGGAATCATATGTCTACCTTTTGTGACTTCGAGTCAGCAAACTGCGGATATC CTGACCAAGAGCTTGGCAAGACCTACCTTTGAGCATTTGATAGGCAAGTTGGGCATGATAGATATCTATGCACCAACTTG AGGGGGGGTGTTGGAAAATATATCAGTATTTATTGTTTTCCAGTCAATTCTAGAGATTCTATTATTGACTTTTTTATATG TAATAATTTTCTCCTTAATTCAAGGAGTAGTAATTCTCTCCTTAATTCAAGGAGTAATAATTGTATCCTCTCTATAAATA CCAGCCTTTGGCTGAGGAATAAAACAGAACAGCATTTACCTATTATTTTCCAATACTTTCTATATATGATTCTAAAGCCA AAATCAATTCTGAGAAGTTTGTGTAAGTAGCTTCTGTGTATCATATTTGATTCTGAGAAAAGAGAAGCGAGTTATATTAC TGCTATAGCATTTAGATATCCAATAAAAGTTAGCTTCTTCACTTTTAAGGATTCTTATTTATTTTGTTGGTTTAGGCATG CAAGATCTCAATCTTGCCCTTTCTGCCGGGACAGTCTTAAAAGAGTAAACTCTGGTGACCTTTGGATATACATGAGGAGC AGTGAGATAGATGACTTGGCTTCAATCAACAAGGAGAATTTGAAAAGGCTATTTATGTACACAGAAAAATTGCCTCTCGT AGCAAGACCTTATATTCATGTCAGATCGTCACAATTGGTGATTGCCACCTAG
CDS sequence (LotjaGi1g1v0440300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGCAAGACTTTCAAGGATTCACTCAAAGCTCTTGAAGCTGACATACAGTTTGCTAATACTCTTGCTTCTGGTTATCC AAGTGATCAGGATGGTGCCTGCCTCCAGATGAGATTGTCTTACAGCCCAGCTGCTCAATTCTTCCTTTTTCTGGTTCAGT GGACTGATTGCCACCTTGCCGGAGCCTTGGGATTGCTTAGAATTCTTATATACAAGGCATATCAGGATGGGAAGACAACC ATGTCCATTTACGAAAGAAAAGCCAGTCTGAAGGAGTTCTATAGTGTGGTCTTTCCCTCTTTATTGCAACTTCACAGAGG AATCACAGATGTTGAAGAGAGGAAACAGAAACATCTATGTGCTACTAGGTACAAGCGTAAAGATTTAACAAGCAAAGGAA AGCTCTCTGAAATCGACATAGAGAGAGAAGAAGAGTGTGGTATTTGCATGGAGATAAACAGCAAGGTTGTATTGCCCAAC TGCAATCACTCAATGTGTATGAAATGCTACCGAGACTGGCATGCAAGATCTCAATCTTGCCCTTTCTGCCGGGACAGTCT TAAAAGAGTAAACTCTGGTGACCTTTGGATATACATGAGGAGCAGTGAGATAGATGACTTGGCTTCAATCAACAAGGAGA ATTTGAAAAGGCTATTTATGTACACAGAAAAATTGCCTCTCGTAGCAAGACCTTATATTCATGTCAGATCGTCACAATTG GTGATTGCCACCTAG
Protein sequence (LotjaGi1g1v0440300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRKTFKDSLKALEADIQFANTLASGYPSDQDGACLQMRLSYSPAAQFFLFLVQWTDCHLAGALGLLRILIYKAYQDGKTT MSIYERKASLKEFYSVVFPSLLQLHRGITDVEERKQKHLCATRYKRKDLTSKGKLSEIDIEREEECGICMEINSKVVLPN CNHSMCMKCYRDWHARSQSCPFCRDSLKRVNSGDLWIYMRSSEIDDLASINKENLKRLFMYTEKLPLVARPYIHVRSSQL VIAT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 231 | 229 | 2.6E-131 | – | |
| PANTHER | 3 | 231 | 229 | 2.6E-131 | – | |
| Gene3D | 129 | 193 | 65 | 1.8E-14 | ||
| SUPERFAMILY | 135 | 189 | 55 | 1.44E-13 | – | |
| Pfam | 143 | 189 | 47 | 1.4E-9 | – | |
| SMART | 146 | 183 | 38 | 8.3E-6 | ||
| ProSiteProfiles | 146 | 184 | 39 | 12.061 | ||
| ProSitePatterns | 161 | 170 | 10 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0440300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…